Protein–RNA interactions for Protein: Q96LR5

UBE2E2, Ubiquitin-conjugating enzyme E2 E2, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2E2Q96LR5 AC007406.3-201ENST00000537295 1063 ntTSL 2 BASIC11.33□□□□□ -0.6
UBE2E2Q96LR5 AC046168.2-201ENST00000560590 875 ntTSL 3 BASIC11.33□□□□□ -0.6
UBE2E2Q96LR5 AC022903.1-201ENST00000579327 469 ntTSL 2 BASIC11.33□□□□□ -0.6
UBE2E2Q96LR5 C20orf141-202ENST00000603872 580 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
UBE2E2Q96LR5 MIR6074-201ENST00000612054 107 ntBASIC11.33□□□□□ -0.6
UBE2E2Q96LR5 MUC1-226ENST00000614519 1093 ntTSL 2 BASIC11.33□□□□□ -0.6
UBE2E2Q96LR5 SLCO6A1-207ENST00000513675 1611 ntTSL 2 BASIC11.33□□□□□ -0.6
UBE2E2Q96LR5 EPB41L1-202ENST00000338074 6266 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
UBE2E2Q96LR5 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
UBE2E2Q96LR5 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
UBE2E2Q96LR5 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
UBE2E2Q96LR5 TBC1D1-214ENST00000508802 4119 ntTSL 2 BASIC11.33□□□□□ -0.6
UBE2E2Q96LR5 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC11.33□□□□□ -0.6
UBE2E2Q96LR5 MYADML-201ENST00000474610 2147 ntBASIC11.33□□□□□ -0.6
UBE2E2Q96LR5 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC11.33□□□□□ -0.6
UBE2E2Q96LR5 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
UBE2E2Q96LR5 SGCE-204ENST00000428696 1409 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
UBE2E2Q96LR5 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC11.33□□□□□ -0.6
UBE2E2Q96LR5 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC11.33□□□□□ -0.6
UBE2E2Q96LR5 DNM3-202ENST00000367731 7613 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
UBE2E2Q96LR5 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
UBE2E2Q96LR5 IKZF1-204ENST00000349824 5757 ntTSL 5 BASIC11.33□□□□□ -0.6
UBE2E2Q96LR5 AHCYP4-201ENST00000419201 1315 ntBASIC11.33□□□□□ -0.6
UBE2E2Q96LR5 GOSR2-203ENST00000415811 2171 ntTSL 5 BASIC11.33□□□□□ -0.6
UBE2E2Q96LR5 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
UBE2E2Q96LR5 SEPT7-201ENST00000350320 4350 ntAPPRIS P5 TSL 5 BASIC11.32□□□□□ -0.6
UBE2E2Q96LR5 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
UBE2E2Q96LR5 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC11.32□□□□□ -0.6
UBE2E2Q96LR5 RIMBP2-201ENST00000261655 6321 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
UBE2E2Q96LR5 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC11.32□□□□□ -0.6
UBE2E2Q96LR5 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC11.32□□□□□ -0.6
UBE2E2Q96LR5 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
UBE2E2Q96LR5 PHLDB2-204ENST00000431670 6127 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
UBE2E2Q96LR5 CRYBG1-204ENST00000633556 9909 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
UBE2E2Q96LR5 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
UBE2E2Q96LR5 ABCC6-208ENST00000622290 4941 ntTSL 5 BASIC11.32□□□□□ -0.6
UBE2E2Q96LR5 FAS-202ENST00000352159 1722 ntTSL 5 BASIC11.32□□□□□ -0.6
UBE2E2Q96LR5 MAGEA4-205ENST00000393920 1721 ntAPPRIS P1 TSL 2 BASIC11.32□□□□□ -0.6
UBE2E2Q96LR5 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
UBE2E2Q96LR5 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
UBE2E2Q96LR5 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
UBE2E2Q96LR5 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC11.32□□□□□ -0.6
UBE2E2Q96LR5 AC082651.4-201ENST00000483023 1852 ntTSL 5 BASIC11.32□□□□□ -0.6
UBE2E2Q96LR5 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC11.32□□□□□ -0.6
UBE2E2Q96LR5 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
UBE2E2Q96LR5 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC11.32□□□□□ -0.6
UBE2E2Q96LR5 PLXNB2-201ENST00000359337 6335 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
UBE2E2Q96LR5 SLC16A9-202ENST00000395348 4178 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
UBE2E2Q96LR5 MPI-203ENST00000535694 1523 ntTSL 2 BASIC11.32□□□□□ -0.6
UBE2E2Q96LR5 TMBIM7P-202ENST00000641474 1516 ntBASIC11.32□□□□□ -0.6
UBE2E2Q96LR5 CTNNBIP1-202ENST00000377258 852 ntAPPRIS P1 TSL 3 BASIC11.32□□□□□ -0.6
UBE2E2Q96LR5 MIR769-201ENST00000390225 118 ntBASIC11.32□□□□□ -0.6
UBE2E2Q96LR5 AC078875.1-201ENST00000431907 724 ntBASIC11.32□□□□□ -0.6
UBE2E2Q96LR5 TPT1P11-201ENST00000458482 498 ntBASIC11.32□□□□□ -0.6
UBE2E2Q96LR5 PRSS30P-205ENST00000506153 699 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
UBE2E2Q96LR5 AC008406.1-201ENST00000509530 541 ntTSL 3 BASIC11.32□□□□□ -0.6
UBE2E2Q96LR5 SPATA24-205ENST00000509959 641 ntTSL 5 BASIC11.32□□□□□ -0.6
UBE2E2Q96LR5 RPL27A-202ENST00000524496 558 ntTSL 3 BASIC11.32□□□□□ -0.6
UBE2E2Q96LR5 NAA40-206ENST00000542163 1035 ntTSL 2 BASIC11.32□□□□□ -0.6
UBE2E2Q96LR5 AC009779.1-201ENST00000551138 283 ntBASIC11.32□□□□□ -0.6
UBE2E2Q96LR5 DRG2-220ENST00000583355 891 ntTSL 3 BASIC11.32□□□□□ -0.6
UBE2E2Q96LR5 AC011447.3-201ENST00000590606 722 ntTSL 3 BASIC11.32□□□□□ -0.6
UBE2E2Q96LR5 AC026740.1-201ENST00000607068 791 ntBASIC11.32□□□□□ -0.6
UBE2E2Q96LR5 AL139099.5-201ENST00000635274 300 ntBASIC11.32□□□□□ -0.6
UBE2E2Q96LR5 AL805961.1-203ENST00000641078 1258 ntBASIC11.32□□□□□ -0.6
UBE2E2Q96LR5 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
UBE2E2Q96LR5 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
UBE2E2Q96LR5 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC11.32□□□□□ -0.6
UBE2E2Q96LR5 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC11.32□□□□□ -0.6
UBE2E2Q96LR5 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
UBE2E2Q96LR5 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
UBE2E2Q96LR5 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC11.32□□□□□ -0.6
UBE2E2Q96LR5 CCP110-203ENST00000396212 5549 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
UBE2E2Q96LR5 TNF-208ENST00000449264 1676 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
UBE2E2Q96LR5 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
UBE2E2Q96LR5 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC11.32□□□□□ -0.6
UBE2E2Q96LR5 CCDC197-206ENST00000640978 1429 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
UBE2E2Q96LR5 ZNF570-201ENST00000330173 5559 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
UBE2E2Q96LR5 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
UBE2E2Q96LR5 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
UBE2E2Q96LR5 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
UBE2E2Q96LR5 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
UBE2E2Q96LR5 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
UBE2E2Q96LR5 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
UBE2E2Q96LR5 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
UBE2E2Q96LR5 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC11.32□□□□□ -0.6
UBE2E2Q96LR5 MTHFR-210ENST00000641407 2387 ntBASIC11.32□□□□□ -0.6
UBE2E2Q96LR5 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
UBE2E2Q96LR5 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
UBE2E2Q96LR5 HNRNPLL-205ENST00000409636 3980 ntTSL 2 BASIC11.32□□□□□ -0.6
UBE2E2Q96LR5 TUBBP5-203ENST00000508529 1334 ntBASIC11.32□□□□□ -0.6
UBE2E2Q96LR5 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
UBE2E2Q96LR5 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
UBE2E2Q96LR5 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
UBE2E2Q96LR5 BSDC1-203ENST00000419121 1473 ntTSL 2 BASIC11.32□□□□□ -0.6
UBE2E2Q96LR5 MTCL1-202ENST00000359865 6093 ntAPPRIS P2 TSL 2 BASIC11.31□□□□□ -0.6
UBE2E2Q96LR5 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC11.31□□□□□ -0.6
UBE2E2Q96LR5 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
UBE2E2Q96LR5 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
UBE2E2Q96LR5 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC11.31□□□□□ -0.6
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms