Protein–RNA interactions for Protein: Q96FV0

LRRC46, Leucine-rich repeat-containing protein 46, humanhuman

Predictions only

Length 321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC46Q96FV0 MCC-202ENST00000408903 3476 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
LRRC46Q96FV0 PTPA-205ENST00000357197 2653 ntTSL 2 BASIC13.31□□□□□ -0.28
LRRC46Q96FV0 KIAA0895L-202ENST00000561621 3500 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
LRRC46Q96FV0 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC13.31□□□□□ -0.28
LRRC46Q96FV0 MBD1-201ENST00000269468 3259 ntAPPRIS P3 TSL 5 BASIC13.31□□□□□ -0.28
LRRC46Q96FV0 PPP6R2-204ENST00000395744 3293 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
LRRC46Q96FV0 SEMA6D-208ENST00000558014 6028 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
LRRC46Q96FV0 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
LRRC46Q96FV0 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
LRRC46Q96FV0 PTPN9-201ENST00000306726 3862 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
LRRC46Q96FV0 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
LRRC46Q96FV0 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
LRRC46Q96FV0 NRDC-201ENST00000352171 3691 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
LRRC46Q96FV0 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
LRRC46Q96FV0 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC13.3□□□□□ -0.28
LRRC46Q96FV0 CDH20-202ENST00000536675 2855 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
LRRC46Q96FV0 SMARCA4-204ENST00000444061 4938 ntAPPRIS ALT1 TSL 5 BASIC13.3□□□□□ -0.28
LRRC46Q96FV0 UBE3A-226ENST00000637886 8725 ntAPPRIS ALT1 TSL 5 BASIC13.3□□□□□ -0.28
LRRC46Q96FV0 AC099521.3-201ENST00000624251 2938 ntBASIC13.3□□□□□ -0.28
LRRC46Q96FV0 FXYD6-207ENST00000527717 1799 ntAPPRIS P2 TSL 2 BASIC13.3□□□□□ -0.28
LRRC46Q96FV0 AC055811.4-201ENST00000624039 1754 ntBASIC13.3□□□□□ -0.28
LRRC46Q96FV0 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC13.3□□□□□ -0.28
LRRC46Q96FV0 NPHP3-ACAD11-201ENST00000471702 7784 ntTSL 2 BASIC13.3□□□□□ -0.28
LRRC46Q96FV0 GSN-215ENST00000545652 2428 ntTSL 2 BASIC13.3□□□□□ -0.28
LRRC46Q96FV0 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC13.3□□□□□ -0.28
LRRC46Q96FV0 ZNF750-202ENST00000572562 1513 ntTSL 2 BASIC13.3□□□□□ -0.28
LRRC46Q96FV0 SFXN3-201ENST00000224807 3089 ntTSL 5 BASIC13.3□□□□□ -0.28
LRRC46Q96FV0 RUFY1-202ENST00000393438 2454 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
LRRC46Q96FV0 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC13.3□□□□□ -0.28
LRRC46Q96FV0 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC13.3□□□□□ -0.28
LRRC46Q96FV0 TXNRD3NB-202ENST00000383572 1131 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
LRRC46Q96FV0 CRYBA2-202ENST00000392096 708 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
LRRC46Q96FV0 NIF3L1-205ENST00000409588 1269 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
LRRC46Q96FV0 AL157902.1-202ENST00000425010 763 ntTSL 3 BASIC13.3□□□□□ -0.28
LRRC46Q96FV0 LINC01762-204ENST00000434879 436 ntTSL 2 BASIC13.3□□□□□ -0.28
LRRC46Q96FV0 AC011742.3-201ENST00000439053 820 ntBASIC13.3□□□□□ -0.28
LRRC46Q96FV0 MRPS25-203ENST00000444840 1281 ntTSL 2 BASIC13.3□□□□□ -0.28
LRRC46Q96FV0 Z97180.1-201ENST00000445173 988 ntBASIC13.3□□□□□ -0.28
LRRC46Q96FV0 AC005077.2-201ENST00000449786 690 ntBASIC13.3□□□□□ -0.28
LRRC46Q96FV0 SERPINA13P-202ENST00000478994 924 ntBASIC13.3□□□□□ -0.28
LRRC46Q96FV0 CDC23-208ENST00000505120 455 ntTSL 3 BASIC13.3□□□□□ -0.28
LRRC46Q96FV0 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
LRRC46Q96FV0 AL928654.3-201ENST00000552675 445 ntTSL 3 BASIC13.3□□□□□ -0.28
LRRC46Q96FV0 AC021594.1-201ENST00000587174 636 ntTSL 3 BASIC13.3□□□□□ -0.28
LRRC46Q96FV0 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC13.3□□□□□ -0.28
LRRC46Q96FV0 LINC01233-203ENST00000601708 494 ntTSL 3 BASIC13.3□□□□□ -0.28
LRRC46Q96FV0 AC091544.8-201ENST00000619490 361 ntBASIC13.3□□□□□ -0.28
LRRC46Q96FV0 CU633904.3-201ENST00000624042 1029 ntBASIC13.3□□□□□ -0.28
LRRC46Q96FV0 AL358215.2-201ENST00000639693 946 ntTSL 5 BASIC13.3□□□□□ -0.28
LRRC46Q96FV0 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC13.3□□□□□ -0.28
LRRC46Q96FV0 CHD1-212ENST00000614616 8095 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
LRRC46Q96FV0 PNPLA6-202ENST00000414982 4522 ntTSL 2 BASIC13.3□□□□□ -0.28
LRRC46Q96FV0 LGALSL-201ENST00000238875 3926 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
LRRC46Q96FV0 AL139385.1-201ENST00000611744 3272 ntBASIC13.3□□□□□ -0.28
LRRC46Q96FV0 AL109910.1-201ENST00000452071 1330 ntTSL 2 BASIC13.3□□□□□ -0.28
LRRC46Q96FV0 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
LRRC46Q96FV0 DBN1-203ENST00000393565 2701 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
LRRC46Q96FV0 DDX17-202ENST00000396821 4791 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
LRRC46Q96FV0 SLC35D1-201ENST00000235345 6162 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
LRRC46Q96FV0 GCC1-201ENST00000321407 4149 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
LRRC46Q96FV0 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
LRRC46Q96FV0 AC245123.1-202ENST00000612422 1719 ntTSL 5 BASIC13.3□□□□□ -0.28
LRRC46Q96FV0 SYN2-205ENST00000620175 3871 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
LRRC46Q96FV0 ZBTB20-215ENST00000481632 2800 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
LRRC46Q96FV0 CYP1B1-AS1-201ENST00000413828 1781 ntTSL 5 BASIC13.3□□□□□ -0.28
LRRC46Q96FV0 DUSP27-201ENST00000271385 3597 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
LRRC46Q96FV0 GALC-206ENST00000544807 2528 ntTSL 2 BASIC13.3□□□□□ -0.28
LRRC46Q96FV0 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
LRRC46Q96FV0 WDR77-201ENST00000235090 2576 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
LRRC46Q96FV0 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
LRRC46Q96FV0 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
LRRC46Q96FV0 ZBTB45P1-201ENST00000452761 1456 ntBASIC13.29□□□□□ -0.28
LRRC46Q96FV0 KRT8P4-201ENST00000509735 1454 ntBASIC13.29□□□□□ -0.28
LRRC46Q96FV0 NISCH-207ENST00000479054 5173 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
LRRC46Q96FV0 KCNT1-209ENST00000490355 3708 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
LRRC46Q96FV0 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
LRRC46Q96FV0 LINC01230-201ENST00000625222 3017 ntBASIC13.29□□□□□ -0.28
LRRC46Q96FV0 KIF7-201ENST00000394412 4551 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
LRRC46Q96FV0 EDEM3-201ENST00000318130 6898 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
LRRC46Q96FV0 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
LRRC46Q96FV0 WNT9B-202ENST00000393461 2654 ntTSL 2 BASIC13.29□□□□□ -0.28
LRRC46Q96FV0 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC13.29□□□□□ -0.28
LRRC46Q96FV0 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
LRRC46Q96FV0 AC027612.1-201ENST00000445234 2395 ntBASIC13.29□□□□□ -0.28
LRRC46Q96FV0 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
LRRC46Q96FV0 OR2C3-201ENST00000366487 8467 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
LRRC46Q96FV0 SPOCK2-201ENST00000317376 5328 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
LRRC46Q96FV0 AC068888.1-207ENST00000546793 2863 ntTSL 2 BASIC13.29□□□□□ -0.28
LRRC46Q96FV0 SLC12A5-211ENST00000616933 6166 ntTSL 5 BASIC13.29□□□□□ -0.28
LRRC46Q96FV0 CCNJ-201ENST00000265992 4115 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
LRRC46Q96FV0 SOCS2-205ENST00000548537 3733 ntTSL 2 BASIC13.29□□□□□ -0.28
LRRC46Q96FV0 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
LRRC46Q96FV0 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
LRRC46Q96FV0 NREP-204ENST00000419114 704 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
LRRC46Q96FV0 AP000320.1-201ENST00000440403 471 ntTSL 3 BASIC13.29□□□□□ -0.28
LRRC46Q96FV0 AC106786.1-201ENST00000442777 792 ntTSL 3 BASIC13.29□□□□□ -0.28
LRRC46Q96FV0 BANF1-202ENST00000445560 946 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
LRRC46Q96FV0 ADM-202ENST00000524948 584 ntTSL 2 BASIC13.29□□□□□ -0.28
LRRC46Q96FV0 AC113192.2-201ENST00000525320 308 ntTSL 3 BASIC13.29□□□□□ -0.28
LRRC46Q96FV0 RPL28-208ENST00000559463 852 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 37.8 ms