Protein–RNA interactions for Protein: Q96FC9

DDX11, ATP-dependent DNA helicase DDX11, humanhuman

Predictions only

Length 970 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11Q96FC9 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
DDX11Q96FC9 COL6A2-201ENST00000300527 3461 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
DDX11Q96FC9 PRKD1-209ENST00000616995 3498 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
DDX11Q96FC9 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC17.41■□□□□ 0.38
DDX11Q96FC9 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
DDX11Q96FC9 AMOTL2-201ENST00000249883 4488 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
DDX11Q96FC9 AC020910.5-201ENST00000623668 1865 ntBASIC17.41■□□□□ 0.38
DDX11Q96FC9 GGACT-201ENST00000376250 2804 ntAPPRIS P1 TSL 3 BASIC17.41■□□□□ 0.38
DDX11Q96FC9 PNPLA6-202ENST00000414982 4522 ntTSL 2 BASIC17.41■□□□□ 0.38
DDX11Q96FC9 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
DDX11Q96FC9 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC17.41■□□□□ 0.38
DDX11Q96FC9 AC239800.3-201ENST00000424684 5243 ntTSL 5 BASIC17.41■□□□□ 0.38
DDX11Q96FC9 RAF1-201ENST00000251849 3300 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
DDX11Q96FC9 PCDHA9-202ENST00000532602 6293 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
DDX11Q96FC9 MRFAP1-202ENST00000382581 1584 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
DDX11Q96FC9 GATB-201ENST00000263985 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
DDX11Q96FC9 ATP2C1-214ENST00000508532 4969 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
DDX11Q96FC9 MAP2K1-201ENST00000307102 3410 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
DDX11Q96FC9 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC17.4■□□□□ 0.38
DDX11Q96FC9 ZBED1-203ENST00000381223 4510 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
DDX11Q96FC9 VWA5B2-202ENST00000426955 4120 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
DDX11Q96FC9 RIMS1-214ENST00000518273 4116 ntTSL 5 BASIC17.4■□□□□ 0.38
DDX11Q96FC9 PAPSS2-201ENST00000361175 3949 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
DDX11Q96FC9 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
DDX11Q96FC9 FAM163A-201ENST00000341785 2909 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
DDX11Q96FC9 CUL3-201ENST00000264414 6741 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
DDX11Q96FC9 MEOX2-201ENST00000262041 2500 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
DDX11Q96FC9 AC138028.6-201ENST00000616106 1482 ntBASIC17.4■□□□□ 0.38
DDX11Q96FC9 AC012617.1-204ENST00000586340 2305 ntBASIC17.4■□□□□ 0.38
DDX11Q96FC9 AL138767.1-201ENST00000354527 744 ntTSL 3 BASIC17.4■□□□□ 0.38
DDX11Q96FC9 TMEM52-203ENST00000378602 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
DDX11Q96FC9 HNRNPA1P32-201ENST00000396326 963 ntBASIC17.4■□□□□ 0.38
DDX11Q96FC9 NDUFAB1P1-201ENST00000404262 460 ntBASIC17.4■□□□□ 0.38
DDX11Q96FC9 TISP43-201ENST00000409793 538 ntTSL 4 BASIC17.4■□□□□ 0.38
DDX11Q96FC9 LIMS4-201ENST00000413601 1215 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
DDX11Q96FC9 LINC01762-204ENST00000434879 436 ntTSL 2 BASIC17.4■□□□□ 0.38
DDX11Q96FC9 POM121L10P-201ENST00000436994 1285 ntBASIC17.4■□□□□ 0.38
DDX11Q96FC9 H2AFV-206ENST00000437072 589 ntTSL 4 BASIC17.4■□□□□ 0.38
DDX11Q96FC9 ZNF789-204ENST00000448667 1055 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
DDX11Q96FC9 AC091804.1-201ENST00000486888 567 ntBASIC17.4■□□□□ 0.38
DDX11Q96FC9 GDNF-AS1-201ENST00000503382 604 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
DDX11Q96FC9 SPATA24-205ENST00000509959 641 ntTSL 5 BASIC17.4■□□□□ 0.38
DDX11Q96FC9 SCARNA20.5-201ENST00000516991 142 ntBASIC17.4■□□□□ 0.38
DDX11Q96FC9 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
DDX11Q96FC9 SEPT9-233ENST00000590917 541 ntTSL 4 BASIC17.4■□□□□ 0.38
DDX11Q96FC9 KC6-205ENST00000599934 556 ntTSL 4 BASIC17.4■□□□□ 0.38
DDX11Q96FC9 IKZF1-217ENST00000612658 962 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
DDX11Q96FC9 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
DDX11Q96FC9 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
DDX11Q96FC9 AL591623.1-201ENST00000417786 1960 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
DDX11Q96FC9 ZNF84-215ENST00000543758 3501 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
DDX11Q96FC9 HILPDA-201ENST00000257696 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
DDX11Q96FC9 MCHR2-202ENST00000369212 1311 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
DDX11Q96FC9 SLC22A12-203ENST00000377572 2887 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
DDX11Q96FC9 AC041040.2-201ENST00000622926 2899 ntBASIC17.4■□□□□ 0.38
DDX11Q96FC9 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
DDX11Q96FC9 FAM186B-201ENST00000257894 2944 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
DDX11Q96FC9 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
DDX11Q96FC9 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC17.4■□□□□ 0.38
DDX11Q96FC9 LRRFIP1-204ENST00000392000 3365 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
DDX11Q96FC9 SETD6-203ENST00000394266 3423 ntTSL 5 BASIC17.4■□□□□ 0.38
DDX11Q96FC9 BAIAP3-202ENST00000397488 4583 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
DDX11Q96FC9 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
DDX11Q96FC9 AL136172.1-201ENST00000598590 1394 ntBASIC17.4■□□□□ 0.38
DDX11Q96FC9 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
DDX11Q96FC9 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
DDX11Q96FC9 FGFR1-202ENST00000335922 4157 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
DDX11Q96FC9 AC004890.2-205ENST00000416232 2804 ntTSL 2 BASIC17.39■□□□□ 0.38
DDX11Q96FC9 CICP4-201ENST00000447359 2812 ntBASIC17.39■□□□□ 0.38
DDX11Q96FC9 BRD1-205ENST00000457780 4997 ntTSL 5 BASIC17.39■□□□□ 0.38
DDX11Q96FC9 TKT-201ENST00000296289 1931 ntTSL 5 BASIC17.39■□□□□ 0.37
DDX11Q96FC9 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
DDX11Q96FC9 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
DDX11Q96FC9 PPP1CB-203ENST00000395366 4893 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
DDX11Q96FC9 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
DDX11Q96FC9 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC17.39■□□□□ 0.37
DDX11Q96FC9 MSI1-201ENST00000257552 2975 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
DDX11Q96FC9 CSF1-201ENST00000329608 4210 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
DDX11Q96FC9 CLASP2-204ENST00000399362 7282 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
DDX11Q96FC9 MLXIPL-201ENST00000313375 3278 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
DDX11Q96FC9 MLXIPL-206ENST00000434326 3252 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
DDX11Q96FC9 NUBPL-201ENST00000281081 3049 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
DDX11Q96FC9 C8orf74-201ENST00000304519 1036 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
DDX11Q96FC9 CTNNBIP1-202ENST00000377258 852 ntAPPRIS P1 TSL 3 BASIC17.39■□□□□ 0.37
DDX11Q96FC9 BLCAP-204ENST00000397135 685 ntAPPRIS P1 TSL 4 BASIC17.39■□□□□ 0.37
DDX11Q96FC9 POM121L8P-201ENST00000417732 1281 ntBASIC17.39■□□□□ 0.37
DDX11Q96FC9 AC007731.4-201ENST00000420225 652 ntTSL 2 BASIC17.39■□□□□ 0.37
DDX11Q96FC9 SAP30L-202ENST00000426761 777 ntTSL 3 BASIC17.39■□□□□ 0.37
DDX11Q96FC9 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC17.39■□□□□ 0.37
DDX11Q96FC9 TMEM107-203ENST00000431792 455 ntTSL 3 BASIC17.39■□□□□ 0.37
DDX11Q96FC9 POM121L9P-203ENST00000441984 1285 ntBASIC17.39■□□□□ 0.37
DDX11Q96FC9 IQCF3-203ENST00000444293 450 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
DDX11Q96FC9 HSPB1P2-201ENST00000448722 546 ntBASIC17.39■□□□□ 0.37
DDX11Q96FC9 IGHJ2P-201ENST00000454480 60 ntBASIC17.39■□□□□ 0.37
DDX11Q96FC9 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
DDX11Q96FC9 PAX5-211ENST00000522003 1019 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
DDX11Q96FC9 AC022903.1-201ENST00000579327 469 ntTSL 2 BASIC17.39■□□□□ 0.37
DDX11Q96FC9 RN7SL713P-201ENST00000582127 302 ntBASIC17.39■□□□□ 0.37
DDX11Q96FC9 DIO1-215ENST00000610607 796 ntTSL 5 BASIC17.39■□□□□ 0.37
DDX11Q96FC9 AL445288.1-201ENST00000610846 654 ntTSL 4 BASIC17.39■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 77.6 ms