Protein–RNA interactions for Protein: Q93050

ATP6V0A1, V-type proton ATPase 116 kDa subunit a isoform 1, humanhuman

Predictions only

Length 837 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V0A1Q93050 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
ATP6V0A1Q93050 LINC00680-205ENST00000450081 1593 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
ATP6V0A1Q93050 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
ATP6V0A1Q93050 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC16.3■□□□□ 0.2
ATP6V0A1Q93050 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
ATP6V0A1Q93050 COL4A2-AS2-201ENST00000458403 1522 ntTSL 2 BASIC16.3■□□□□ 0.2
ATP6V0A1Q93050 RAN-210ENST00000541630 1475 ntTSL 2 BASIC16.3■□□□□ 0.2
ATP6V0A1Q93050 CPA5-201ENST00000393213 1444 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
ATP6V0A1Q93050 SCGN-203ENST00000612225 1402 ntTSL 5 BASIC16.3■□□□□ 0.2
ATP6V0A1Q93050 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
ATP6V0A1Q93050 TOB1-AS1-201ENST00000416263 1351 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
ATP6V0A1Q93050 SNHG1-213ENST00000540725 1374 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
ATP6V0A1Q93050 AHCYP4-201ENST00000419201 1315 ntBASIC16.3■□□□□ 0.2
ATP6V0A1Q93050 HAND2-AS1-202ENST00000502896 5278 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
ATP6V0A1Q93050 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC16.3■□□□□ 0.2
ATP6V0A1Q93050 MYL12B-201ENST00000237500 1210 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
ATP6V0A1Q93050 KRTAP2-4-201ENST00000394015 764 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
ATP6V0A1Q93050 AC069218.1-201ENST00000435269 762 ntBASIC16.3■□□□□ 0.2
ATP6V0A1Q93050 TPT1P11-201ENST00000458482 498 ntBASIC16.3■□□□□ 0.2
ATP6V0A1Q93050 LINC02046-201ENST00000469812 378 ntTSL 3 BASIC16.3■□□□□ 0.2
ATP6V0A1Q93050 PARP8-206ENST00000503665 572 ntTSL 4 BASIC16.3■□□□□ 0.2
ATP6V0A1Q93050 AC019193.1-201ENST00000506678 823 ntBASIC16.3■□□□□ 0.2
ATP6V0A1Q93050 HOXA10-AS-202ENST00000519935 1161 ntTSL 3 BASIC16.3■□□□□ 0.2
ATP6V0A1Q93050 NPLOC4-209ENST00000572760 946 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
ATP6V0A1Q93050 DRG2-220ENST00000583355 891 ntTSL 3 BASIC16.3■□□□□ 0.2
ATP6V0A1Q93050 NAT9-224ENST00000583757 583 ntTSL 3 BASIC16.3■□□□□ 0.2
ATP6V0A1Q93050 ELOF1-202ENST00000586120 658 ntAPPRIS P1 TSL 3 BASIC16.3■□□□□ 0.2
ATP6V0A1Q93050 U62317.3-201ENST00000608319 855 ntBASIC16.3■□□□□ 0.2
ATP6V0A1Q93050 TTC28-AS1_3.1-201ENST00000615579 181 ntBASIC16.3■□□□□ 0.2
ATP6V0A1Q93050 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
ATP6V0A1Q93050 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
ATP6V0A1Q93050 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
ATP6V0A1Q93050 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
ATP6V0A1Q93050 CKMT1B-201ENST00000300283 1779 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
ATP6V0A1Q93050 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC16.3■□□□□ 0.2
ATP6V0A1Q93050 CKMT1A-204ENST00000434505 1779 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
ATP6V0A1Q93050 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
ATP6V0A1Q93050 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
ATP6V0A1Q93050 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
ATP6V0A1Q93050 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
ATP6V0A1Q93050 COLEC11-203ENST00000382062 1633 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
ATP6V0A1Q93050 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
ATP6V0A1Q93050 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
ATP6V0A1Q93050 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
ATP6V0A1Q93050 PRAMEF8-202ENST00000614831 1592 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
ATP6V0A1Q93050 PRAMEF7-202ENST00000616979 1592 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
ATP6V0A1Q93050 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC16.3■□□□□ 0.2
ATP6V0A1Q93050 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
ATP6V0A1Q93050 ASGR1-201ENST00000269299 1504 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
ATP6V0A1Q93050 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
ATP6V0A1Q93050 AC097376.2-205ENST00000610159 5334 ntBASIC16.29■□□□□ 0.2
ATP6V0A1Q93050 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC16.29■□□□□ 0.2
ATP6V0A1Q93050 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
ATP6V0A1Q93050 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC16.29■□□□□ 0.2
ATP6V0A1Q93050 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC16.29■□□□□ 0.2
ATP6V0A1Q93050 SPEG-201ENST00000312358 10782 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
ATP6V0A1Q93050 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
ATP6V0A1Q93050 SHOX-202ENST00000381575 1351 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
ATP6V0A1Q93050 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
ATP6V0A1Q93050 NDUFB8-201ENST00000299166 671 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
ATP6V0A1Q93050 CRB3-201ENST00000308243 631 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
ATP6V0A1Q93050 CABP1-203ENST00000351200 770 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
ATP6V0A1Q93050 TOMM7-201ENST00000358435 778 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
ATP6V0A1Q93050 CD1E-202ENST00000368155 696 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
ATP6V0A1Q93050 CD1E-204ENST00000368157 399 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
ATP6V0A1Q93050 COPS7B-205ENST00000409295 1009 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
ATP6V0A1Q93050 AC069277.1-202ENST00000414438 761 ntTSL 3 BASIC16.29■□□□□ 0.2
ATP6V0A1Q93050 APOL3-207ENST00000424878 1240 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
ATP6V0A1Q93050 SAP25-201ENST00000538735 837 ntAPPRIS P2 TSL 3 BASIC16.29■□□□□ 0.2
ATP6V0A1Q93050 SORD2P-201ENST00000558556 1069 ntBASIC16.29■□□□□ 0.2
ATP6V0A1Q93050 AC005779.2-201ENST00000593083 550 ntAPPRIS P1 TSL 4 BASIC16.29■□□□□ 0.2
ATP6V0A1Q93050 MIR6727-201ENST00000620702 65 ntBASIC16.29■□□□□ 0.2
ATP6V0A1Q93050 AC004706.3-207ENST00000634823 977 ntTSL 5 BASIC16.29■□□□□ 0.2
ATP6V0A1Q93050 GK-204ENST00000378945 2063 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
ATP6V0A1Q93050 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC16.29■□□□□ 0.2
ATP6V0A1Q93050 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
ATP6V0A1Q93050 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
ATP6V0A1Q93050 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
ATP6V0A1Q93050 ADAMTS15-201ENST00000299164 5673 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
ATP6V0A1Q93050 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC16.29■□□□□ 0.2
ATP6V0A1Q93050 ANOS1-201ENST00000262648 6314 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
ATP6V0A1Q93050 ZNF691-206ENST00000372508 1577 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
ATP6V0A1Q93050 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
ATP6V0A1Q93050 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
ATP6V0A1Q93050 STK17B-201ENST00000263955 5287 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
ATP6V0A1Q93050 IRF9-202ENST00000396864 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
ATP6V0A1Q93050 STK26-204ENST00000481105 1835 ntTSL 2 BASIC16.29■□□□□ 0.2
ATP6V0A1Q93050 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
ATP6V0A1Q93050 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC16.28■□□□□ 0.2
ATP6V0A1Q93050 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC16.28■□□□□ 0.2
ATP6V0A1Q93050 ZCCHC17-204ENST00000546109 1705 ntTSL 2 BASIC16.28■□□□□ 0.2
ATP6V0A1Q93050 WSCD2-206ENST00000547525 4481 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
ATP6V0A1Q93050 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
ATP6V0A1Q93050 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
ATP6V0A1Q93050 CICP24-201ENST00000605464 2705 ntBASIC16.28■□□□□ 0.2
ATP6V0A1Q93050 ABLIM2-209ENST00000505872 1680 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
ATP6V0A1Q93050 RAB37-216ENST00000613645 1653 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
ATP6V0A1Q93050 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC16.28■□□□□ 0.2
ATP6V0A1Q93050 DLK1-201ENST00000331224 1324 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
ATP6V0A1Q93050 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms