Protein–RNA interactions for Protein: Q8WV48

CCDC107, Coiled-coil domain-containing protein 107, humanhuman

Predictions only

Length 283 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC107Q8WV48 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
CCDC107Q8WV48 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC12.74□□□□□ -0.37
CCDC107Q8WV48 AC104794.3-201ENST00000566840 1248 ntBASIC12.74□□□□□ -0.37
CCDC107Q8WV48 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC12.74□□□□□ -0.37
CCDC107Q8WV48 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC12.74□□□□□ -0.37
CCDC107Q8WV48 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
CCDC107Q8WV48 KIF17-203ENST00000400463 3731 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
CCDC107Q8WV48 LCA5-202ENST00000392959 4719 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CCDC107Q8WV48 PELP1-202ENST00000436683 3524 ntTSL 2 BASIC12.74□□□□□ -0.37
CCDC107Q8WV48 NOX5-209ENST00000530406 2289 ntAPPRIS P4 TSL 1 (best) BASIC12.74□□□□□ -0.37
CCDC107Q8WV48 CR383656.2-201ENST00000548656 2254 ntBASIC12.74□□□□□ -0.37
CCDC107Q8WV48 C19orf66-202ENST00000397881 2140 ntAPPRIS ALT2 TSL 2 BASIC12.74□□□□□ -0.37
CCDC107Q8WV48 ARAP3-203ENST00000508305 4927 ntTSL 2 BASIC12.74□□□□□ -0.37
CCDC107Q8WV48 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CCDC107Q8WV48 WDR24-201ENST00000248142 2763 ntTSL 5 BASIC12.74□□□□□ -0.37
CCDC107Q8WV48 TRIM10-204ENST00000449742 3546 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CCDC107Q8WV48 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
CCDC107Q8WV48 RPS6KA1-213ENST00000526792 2596 ntTSL 5 BASIC12.74□□□□□ -0.37
CCDC107Q8WV48 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
CCDC107Q8WV48 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
CCDC107Q8WV48 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CCDC107Q8WV48 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
CCDC107Q8WV48 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
CCDC107Q8WV48 SCNN1A-201ENST00000228916 3135 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
CCDC107Q8WV48 RAPGEF4-AS1-202ENST00000435328 4625 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
CCDC107Q8WV48 ARHGAP36-201ENST00000276211 3083 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
CCDC107Q8WV48 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
CCDC107Q8WV48 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC12.73□□□□□ -0.37
CCDC107Q8WV48 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CCDC107Q8WV48 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC12.73□□□□□ -0.37
CCDC107Q8WV48 LRSAM1-204ENST00000373324 3044 ntTSL 2 BASIC12.73□□□□□ -0.37
CCDC107Q8WV48 ACP7-201ENST00000331256 2966 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
CCDC107Q8WV48 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CCDC107Q8WV48 MYRF-202ENST00000278836 5927 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
CCDC107Q8WV48 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CCDC107Q8WV48 CFAP65-208ENST00000453220 5877 ntAPPRIS P4 TSL 5 BASIC12.73□□□□□ -0.37
CCDC107Q8WV48 AC023794.5-201ENST00000564380 2157 ntBASIC12.73□□□□□ -0.37
CCDC107Q8WV48 SF1-201ENST00000227503 2850 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
CCDC107Q8WV48 ZBTB7B-202ENST00000368426 3594 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
CCDC107Q8WV48 C15orf39-207ENST00000567617 4249 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
CCDC107Q8WV48 ANKRD20A19P-202ENST00000442969 2796 ntTSL 2 BASIC12.73□□□□□ -0.37
CCDC107Q8WV48 PRAME-214ENST00000543184 2758 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
CCDC107Q8WV48 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC12.73□□□□□ -0.37
CCDC107Q8WV48 PLA2G3-201ENST00000215885 2697 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CCDC107Q8WV48 EIF4G1-207ENST00000411531 4683 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
CCDC107Q8WV48 AL360270.3-201ENST00000609118 1348 ntBASIC12.73□□□□□ -0.37
CCDC107Q8WV48 MX1-218ENST00000619682 1980 ntTSL 5 BASIC12.73□□□□□ -0.37
CCDC107Q8WV48 PCMTD2-204ENST00000369758 3212 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
CCDC107Q8WV48 LRP8-203ENST00000354412 2553 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
CCDC107Q8WV48 IFRD1-205ENST00000429071 1938 ntTSL 2 BASIC12.73□□□□□ -0.37
CCDC107Q8WV48 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CCDC107Q8WV48 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC12.73□□□□□ -0.37
CCDC107Q8WV48 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC12.73□□□□□ -0.37
CCDC107Q8WV48 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC12.73□□□□□ -0.37
CCDC107Q8WV48 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC12.73□□□□□ -0.37
CCDC107Q8WV48 FAM86LP-201ENST00000478302 853 ntBASIC12.73□□□□□ -0.37
CCDC107Q8WV48 AC004890.2-204ENST00000481968 304 ntBASIC12.73□□□□□ -0.37
CCDC107Q8WV48 AC093214.1-201ENST00000511688 1107 ntBASIC12.73□□□□□ -0.37
CCDC107Q8WV48 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC12.73□□□□□ -0.37
CCDC107Q8WV48 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CCDC107Q8WV48 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC12.73□□□□□ -0.37
CCDC107Q8WV48 AC036164.1-201ENST00000570544 333 ntBASIC12.73□□□□□ -0.37
CCDC107Q8WV48 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
CCDC107Q8WV48 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
CCDC107Q8WV48 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC12.73□□□□□ -0.37
CCDC107Q8WV48 SLC9B1-201ENST00000296422 1879 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
CCDC107Q8WV48 USP22-206ENST00000537526 4976 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
CCDC107Q8WV48 GIPC3-201ENST00000322315 4335 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CCDC107Q8WV48 ZFP36L2-201ENST00000282388 3696 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CCDC107Q8WV48 TRABD2B-202ENST00000606738 7034 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CCDC107Q8WV48 AL590644.1-201ENST00000412427 4676 ntTSL 4 BASIC12.73□□□□□ -0.37
CCDC107Q8WV48 RRAGD-201ENST00000359203 4042 ntTSL 2 BASIC12.73□□□□□ -0.37
CCDC107Q8WV48 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CCDC107Q8WV48 IQCE-216ENST00000611775 2289 ntAPPRIS ALT2 TSL 2 BASIC12.73□□□□□ -0.37
CCDC107Q8WV48 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CCDC107Q8WV48 TCF12-201ENST00000267811 6061 ntAPPRIS ALT1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CCDC107Q8WV48 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC12.73□□□□□ -0.37
CCDC107Q8WV48 HYOU1-218ENST00000614668 1569 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
CCDC107Q8WV48 ZNF77-201ENST00000314531 2002 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CCDC107Q8WV48 DCAF8L2-203ENST00000545306 2013 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
CCDC107Q8WV48 SMARCA4-204ENST00000444061 4938 ntAPPRIS ALT1 TSL 5 BASIC12.72□□□□□ -0.37
CCDC107Q8WV48 AC020910.6-201ENST00000623084 1459 ntBASIC12.72□□□□□ -0.37
CCDC107Q8WV48 ADAT1-201ENST00000307921 1869 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CCDC107Q8WV48 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
CCDC107Q8WV48 MLXIPL-201ENST00000313375 3278 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
CCDC107Q8WV48 ATG9A-201ENST00000361242 3130 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
CCDC107Q8WV48 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CCDC107Q8WV48 ZDHHC6-202ENST00000369405 2170 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
CCDC107Q8WV48 NDRG4-221ENST00000563799 3014 ntAPPRIS ALT1 TSL 2 BASIC12.72□□□□□ -0.37
CCDC107Q8WV48 DOK1-202ENST00000340004 1722 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
CCDC107Q8WV48 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CCDC107Q8WV48 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
CCDC107Q8WV48 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC12.72□□□□□ -0.37
CCDC107Q8WV48 PNMT-202ENST00000394246 821 ntTSL 2 BASIC12.72□□□□□ -0.37
CCDC107Q8WV48 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
CCDC107Q8WV48 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC12.72□□□□□ -0.37
CCDC107Q8WV48 FTH1-202ENST00000526640 786 ntTSL 2 BASIC12.72□□□□□ -0.37
CCDC107Q8WV48 TPRX2P-201ENST00000535362 881 ntBASIC12.72□□□□□ -0.37
CCDC107Q8WV48 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
CCDC107Q8WV48 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC12.72□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 67.9 ms