Protein–RNA interactions for Protein: Q8TAB3

PCDH19, Protocadherin-19, humanhuman

Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH19Q8TAB3 IGHA2-202ENST00000497872 1320 ntAPPRIS P5 TSL 1 (best) BASIC15.08■□□□□ 0
PCDH19Q8TAB3 PRG2-202ENST00000525955 1367 ntAPPRIS P3 TSL 2 BASIC15.08■□□□□ 0
PCDH19Q8TAB3 LRIF1-202ENST00000485275 1796 ntAPPRIS ALT2 TSL 2 BASIC15.08■□□□□ 0
PCDH19Q8TAB3 SRPX-205ENST00000538295 1780 ntAPPRIS ALT2 TSL 2 BASIC15.08■□□□□ 0
PCDH19Q8TAB3 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC15.08■□□□□ 0
PCDH19Q8TAB3 WNT2B-202ENST00000369684 3818 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
PCDH19Q8TAB3 COL6A2-202ENST00000310645 3446 ntTSL 5 BASIC15.08■□□□□ 0
PCDH19Q8TAB3 FAM149A-203ENST00000389354 1815 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
PCDH19Q8TAB3 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
PCDH19Q8TAB3 BCAR1-205ENST00000420641 2725 ntAPPRIS ALT2 TSL 2 BASIC15.08■□□□□ 0
PCDH19Q8TAB3 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
PCDH19Q8TAB3 B3GNT7-201ENST00000287590 3706 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
PCDH19Q8TAB3 NKIRAS2-201ENST00000307641 2948 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
PCDH19Q8TAB3 KRT8P24-201ENST00000560290 1559 ntBASIC15.07■□□□□ 0
PCDH19Q8TAB3 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC15.07■□□□□ 0
PCDH19Q8TAB3 CXorf36-201ENST00000377934 2513 ntTSL 1 (best) BASIC15.07■□□□□ 0
PCDH19Q8TAB3 FAM86B1-203ENST00000448228 2096 ntAPPRIS P2 TSL 5 BASIC15.07■□□□□ 0
PCDH19Q8TAB3 SHCBP1-201ENST00000303383 3461 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
PCDH19Q8TAB3 ARFGAP1-202ENST00000370275 3467 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
PCDH19Q8TAB3 SLC6A12-207ENST00000536824 2101 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
PCDH19Q8TAB3 NT5C3A-213ENST00000610140 1670 ntAPPRIS ALT1 TSL 1 (best) BASIC15.07■□□□□ 0
PCDH19Q8TAB3 GRID2IP-203ENST00000457091 3636 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
PCDH19Q8TAB3 AC005899.8-201ENST00000625127 3153 ntTSL 5 BASIC15.07■□□□□ 0
PCDH19Q8TAB3 FOXL1-201ENST00000320241 3655 ntAPPRIS P1 BASIC15.07■□□□□ 0
PCDH19Q8TAB3 PDE4A-209ENST00000592685 2707 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
PCDH19Q8TAB3 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC15.07■□□□□ 0
PCDH19Q8TAB3 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
PCDH19Q8TAB3 SERPINE3-204ENST00000524365 2293 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
PCDH19Q8TAB3 BST2-201ENST00000252593 1019 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
PCDH19Q8TAB3 NPPC-201ENST00000295440 500 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
PCDH19Q8TAB3 LAMTOR4-201ENST00000341942 605 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
PCDH19Q8TAB3 SPDYE7P-201ENST00000355920 1064 ntTSL 1 (best) BASIC15.07■□□□□ 0
PCDH19Q8TAB3 ANAPC11-202ENST00000357385 881 ntTSL 1 (best) BASIC15.07■□□□□ 0
PCDH19Q8TAB3 RBM38-204ENST00000371219 760 ntTSL 2 BASIC15.07■□□□□ 0
PCDH19Q8TAB3 GAS5-209ENST00000430245 723 ntTSL 3 BASIC15.07■□□□□ 0
PCDH19Q8TAB3 AL645933.1-201ENST00000440087 609 ntBASIC15.07■□□□□ 0
PCDH19Q8TAB3 IQCF3-203ENST00000444293 450 ntTSL 1 (best) BASIC15.07■□□□□ 0
PCDH19Q8TAB3 FAM25G-201ENST00000452267 345 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
PCDH19Q8TAB3 AL157935.2-201ENST00000476274 1071 ntTSL 5 BASIC15.07■□□□□ 0
PCDH19Q8TAB3 CD63-214ENST00000552692 949 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
PCDH19Q8TAB3 AC005586.2-201ENST00000563946 837 ntBASIC15.07■□□□□ 0
PCDH19Q8TAB3 AC123786.1-201ENST00000581626 661 ntTSL 3 BASIC15.07■□□□□ 0
PCDH19Q8TAB3 AC009955.4-201ENST00000597192 544 ntBASIC15.07■□□□□ 0
PCDH19Q8TAB3 AC010328.2-201ENST00000597698 1111 ntBASIC15.07■□□□□ 0
PCDH19Q8TAB3 SLC27A3-201ENST00000271857 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
PCDH19Q8TAB3 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
PCDH19Q8TAB3 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC15.07■□□□□ 0
PCDH19Q8TAB3 FOSL2-201ENST00000264716 6708 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
PCDH19Q8TAB3 TPO-205ENST00000382201 2956 ntTSL 1 (best) BASIC15.07■□□□□ 0
PCDH19Q8TAB3 TRIM46-210ENST00000545012 2979 ntTSL 2 BASIC15.07■□□□□ 0
PCDH19Q8TAB3 NOP14-203ENST00000416614 3538 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
PCDH19Q8TAB3 OS9-207ENST00000439210 1946 ntTSL 2 BASIC15.07■□□□□ 0
PCDH19Q8TAB3 LAT2-205ENST00000460943 2527 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
PCDH19Q8TAB3 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
PCDH19Q8TAB3 SDR42E2-201ENST00000602312 2630 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
PCDH19Q8TAB3 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
PCDH19Q8TAB3 PGLYRP4-202ENST00000368739 2116 ntAPPRIS ALT1 TSL 5 BASIC15.07■□□□□ 0
PCDH19Q8TAB3 MARK2-206ENST00000425897 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
PCDH19Q8TAB3 SLC16A9-202ENST00000395348 4178 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
PCDH19Q8TAB3 CRHR2-202ENST00000348438 1600 ntTSL 1 (best) BASIC15.06■□□□□ 0
PCDH19Q8TAB3 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC15.06■□□□□ 0
PCDH19Q8TAB3 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
PCDH19Q8TAB3 HDAC9-208ENST00000417496 2524 ntTSL 2 BASIC15.06■□□□□ 0
PCDH19Q8TAB3 OPN5-202ENST00000371211 1801 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
PCDH19Q8TAB3 COG3-206ENST00000617493 1809 ntTSL 1 (best) BASIC15.06■□□□□ 0
PCDH19Q8TAB3 TMEM212-201ENST00000334567 1881 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
PCDH19Q8TAB3 NCKAP5L-201ENST00000335999 4900 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
PCDH19Q8TAB3 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC15.06■□□□□ 0
PCDH19Q8TAB3 TBC1D3-201ENST00000620215 2063 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
PCDH19Q8TAB3 TBC1D3C-201ENST00000622206 2063 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
PCDH19Q8TAB3 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
PCDH19Q8TAB3 CDKN1A-202ENST00000373711 793 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
PCDH19Q8TAB3 TISP43-201ENST00000409793 538 ntTSL 4 BASIC15.06■□□□□ 0
PCDH19Q8TAB3 AL157407.1-201ENST00000435784 904 ntBASIC15.06■□□□□ 0
PCDH19Q8TAB3 GUSBP2-202ENST00000479900 1203 ntTSL 1 (best) BASIC15.06■□□□□ 0
PCDH19Q8TAB3 GSTZ1-219ENST00000557639 873 ntTSL 2 BASIC15.06■□□□□ 0
PCDH19Q8TAB3 AC010491.1-202ENST00000567048 528 ntTSL 2 BASIC15.06■□□□□ 0
PCDH19Q8TAB3 TIE1-201ENST00000372476 3882 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
PCDH19Q8TAB3 AC148477.2-201ENST00000537762 3039 ntTSL 3 BASIC15.06■□□□□ 0
PCDH19Q8TAB3 ARHGEF26-203ENST00000465817 2353 ntTSL 1 (best) BASIC15.06■□□□□ 0
PCDH19Q8TAB3 GPSM3-209ENST00000487761 1460 ntTSL 5 BASIC15.06■□□□□ 0
PCDH19Q8TAB3 APBB1-203ENST00000389906 2684 ntAPPRIS ALT1 TSL 5 BASIC15.06■□□□□ 0
PCDH19Q8TAB3 NFE2L2-202ENST00000397063 2651 ntTSL 1 (best) BASIC15.06■□□□□ 0
PCDH19Q8TAB3 POLRMT-202ENST00000588649 3835 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
PCDH19Q8TAB3 AC245123.1-202ENST00000612422 1719 ntTSL 5 BASIC15.06■□□□□ 0
PCDH19Q8TAB3 DDC-213ENST00000617822 1809 ntTSL 3 BASIC15.06■□□□□ 0
PCDH19Q8TAB3 FGF12-207ENST00000454309 3058 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
PCDH19Q8TAB3 JPH1-201ENST00000342232 4378 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
PCDH19Q8TAB3 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
PCDH19Q8TAB3 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC15.05■□□□□ 0
PCDH19Q8TAB3 TAB1-201ENST00000216160 3237 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
PCDH19Q8TAB3 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
PCDH19Q8TAB3 AC090643.2-201ENST00000623442 2029 ntBASIC15.05■□□□□ 0
PCDH19Q8TAB3 PRKD1-209ENST00000616995 3498 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ 0
PCDH19Q8TAB3 CNN2-201ENST00000263097 2179 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
PCDH19Q8TAB3 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC15.05■□□□□ 0
PCDH19Q8TAB3 CNN2-205ENST00000562958 2194 ntTSL 2 BASIC15.05■□□□□ 0
PCDH19Q8TAB3 PEX5L-211ENST00000472994 2235 ntAPPRIS ALT2 TSL 2 BASIC15.05■□□□□ 0
PCDH19Q8TAB3 PRKAB1-201ENST00000229328 2610 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
PCDH19Q8TAB3 PEX5-207ENST00000455147 2689 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ 0
Retrieved 100 of 98,524 protein–RNA pairs in 45 ms