Protein–RNA interactions for Protein: Q8NFW1

COL22A1, Collagen alpha-1(XXII) chain, humanhuman

Predicted RBP Predictions only

Length 1,626 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL22A1Q8NFW1 CRISP2-201ENST00000339139 1382 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
COL22A1Q8NFW1 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC18.65■□□□□ 0.58
COL22A1Q8NFW1 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
COL22A1Q8NFW1 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
COL22A1Q8NFW1 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
COL22A1Q8NFW1 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
COL22A1Q8NFW1 LYRM1-202ENST00000396052 1659 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
COL22A1Q8NFW1 RARG-202ENST00000394426 2640 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
COL22A1Q8NFW1 TMEM74B-201ENST00000381894 1730 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
COL22A1Q8NFW1 VKORC1-203ENST00000354895 901 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
COL22A1Q8NFW1 AC013436.1-201ENST00000425077 422 ntTSL 3 BASIC18.65■□□□□ 0.58
COL22A1Q8NFW1 AC041040.1-201ENST00000425197 460 ntBASIC18.65■□□□□ 0.58
COL22A1Q8NFW1 MKNK1-205ENST00000428112 1270 ntAPPRIS P3 TSL 2 BASIC18.65■□□□□ 0.58
COL22A1Q8NFW1 LINC01824-201ENST00000436082 528 ntTSL 4 BASIC18.65■□□□□ 0.58
COL22A1Q8NFW1 UGT1A12P-201ENST00000447084 853 ntBASIC18.65■□□□□ 0.58
COL22A1Q8NFW1 AL512288.1-201ENST00000448015 491 ntTSL 5 BASIC18.65■□□□□ 0.58
COL22A1Q8NFW1 AC011995.2-201ENST00000452701 574 ntTSL 4 BASIC18.65■□□□□ 0.58
COL22A1Q8NFW1 RN7SL838P-201ENST00000481676 295 ntBASIC18.65■□□□□ 0.58
COL22A1Q8NFW1 DLG4-206ENST00000485100 1004 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
COL22A1Q8NFW1 GIMAP6-202ENST00000493969 876 ntTSL 2 BASIC18.65■□□□□ 0.58
COL22A1Q8NFW1 IQSEC2-205ENST00000498281 673 ntTSL 3 BASIC18.65■□□□□ 0.58
COL22A1Q8NFW1 SLC25A3-206ENST00000547534 556 ntTSL 2 BASIC18.65■□□□□ 0.58
COL22A1Q8NFW1 SNRPF-205ENST00000553192 552 ntTSL 4 BASIC18.65■□□□□ 0.58
COL22A1Q8NFW1 AC140912.1-202ENST00000561802 194 ntTSL 3 BASIC18.65■□□□□ 0.58
COL22A1Q8NFW1 HMOX2-213ENST00000575120 1027 ntTSL 3 BASIC18.65■□□□□ 0.58
COL22A1Q8NFW1 AL035427.1-201ENST00000602441 387 ntTSL 3 BASIC18.65■□□□□ 0.58
COL22A1Q8NFW1 Metazoa_SRP.210-201ENST00000637921 244 ntBASIC18.65■□□□□ 0.58
COL22A1Q8NFW1 EIF3F-209ENST00000640290 372 ntTSL 5 BASIC18.65■□□□□ 0.58
COL22A1Q8NFW1 ZNF570-202ENST00000586475 1985 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
COL22A1Q8NFW1 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
COL22A1Q8NFW1 NAP1L1-226ENST00000552342 1526 ntTSL 5 BASIC18.65■□□□□ 0.58
COL22A1Q8NFW1 USP44-202ENST00000393091 3161 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
COL22A1Q8NFW1 CLEC10A-206ENST00000576617 1800 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
COL22A1Q8NFW1 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
COL22A1Q8NFW1 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
COL22A1Q8NFW1 LINC02347-203ENST00000540774 1442 ntTSL 5 BASIC18.65■□□□□ 0.58
COL22A1Q8NFW1 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
COL22A1Q8NFW1 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
COL22A1Q8NFW1 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
COL22A1Q8NFW1 AL031590.1-202ENST00000641466 1737 ntBASIC18.64■□□□□ 0.58
COL22A1Q8NFW1 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
COL22A1Q8NFW1 STK16-202ENST00000409260 1493 ntTSL 5 BASIC18.64■□□□□ 0.58
COL22A1Q8NFW1 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
COL22A1Q8NFW1 POLL-206ENST00000370172 2308 ntTSL 2 BASIC18.64■□□□□ 0.58
COL22A1Q8NFW1 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
COL22A1Q8NFW1 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
COL22A1Q8NFW1 TAMM41-201ENST00000273037 1297 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
COL22A1Q8NFW1 AL591499.1-201ENST00000307155 1153 ntBASIC18.64■□□□□ 0.57
COL22A1Q8NFW1 ECHDC2-201ENST00000358358 1126 ntTSL 2 BASIC18.64■□□□□ 0.57
COL22A1Q8NFW1 WDR54-202ENST00000409791 854 ntTSL 3 BASIC18.64■□□□□ 0.57
COL22A1Q8NFW1 AL353653.1-201ENST00000452336 638 ntTSL 2 BASIC18.64■□□□□ 0.57
COL22A1Q8NFW1 IMMP1L-213ENST00000533642 314 ntTSL 2 BASIC18.64■□□□□ 0.57
COL22A1Q8NFW1 PHBP18-201ENST00000546648 813 ntBASIC18.64■□□□□ 0.57
COL22A1Q8NFW1 CARHSP1-208ENST00000567554 598 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
COL22A1Q8NFW1 MIR4326-201ENST00000582203 59 ntBASIC18.64■□□□□ 0.57
COL22A1Q8NFW1 RAB11B-205ENST00000601897 577 ntTSL 3 BASIC18.64■□□□□ 0.57
COL22A1Q8NFW1 ASNA1-205ENST00000611688 1214 ntTSL 5 BASIC18.64■□□□□ 0.57
COL22A1Q8NFW1 COG6-212ENST00000630730 186 ntTSL 5 BASIC18.64■□□□□ 0.57
COL22A1Q8NFW1 AC137936.2-202ENST00000638124 1146 ntTSL 5 BASIC18.64■□□□□ 0.57
COL22A1Q8NFW1 C16orf45-202ENST00000452191 1865 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
COL22A1Q8NFW1 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC18.64■□□□□ 0.57
COL22A1Q8NFW1 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
COL22A1Q8NFW1 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
COL22A1Q8NFW1 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
COL22A1Q8NFW1 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
COL22A1Q8NFW1 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
COL22A1Q8NFW1 MARCH9-202ENST00000548358 1668 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
COL22A1Q8NFW1 INCA1-201ENST00000355025 1383 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
COL22A1Q8NFW1 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC18.64■□□□□ 0.57
COL22A1Q8NFW1 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
COL22A1Q8NFW1 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
COL22A1Q8NFW1 AC011477.7-201ENST00000617163 1440 ntBASIC18.64■□□□□ 0.57
COL22A1Q8NFW1 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
COL22A1Q8NFW1 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
COL22A1Q8NFW1 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
COL22A1Q8NFW1 KRT37-201ENST00000225550 1475 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
COL22A1Q8NFW1 PCGF2-203ENST00000616129 1534 ntTSL 5 BASIC18.64■□□□□ 0.57
COL22A1Q8NFW1 PTN-202ENST00000393083 1599 ntTSL 5 BASIC18.64■□□□□ 0.57
COL22A1Q8NFW1 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC18.64■□□□□ 0.57
COL22A1Q8NFW1 LINC00388-201ENST00000412714 663 ntTSL 5 BASIC18.63■□□□□ 0.57
COL22A1Q8NFW1 C10orf90-207ENST00000480379 1012 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
COL22A1Q8NFW1 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
COL22A1Q8NFW1 FTSJ1-203ENST00000396894 1669 ntTSL 2 BASIC18.63■□□□□ 0.57
COL22A1Q8NFW1 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
COL22A1Q8NFW1 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
COL22A1Q8NFW1 PPT2-245ENST00000361568 1759 ntAPPRIS P4 TSL 1 (best) BASIC18.63■□□□□ 0.57
COL22A1Q8NFW1 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
COL22A1Q8NFW1 FAM149A-203ENST00000389354 1815 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
COL22A1Q8NFW1 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
COL22A1Q8NFW1 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC18.63■□□□□ 0.57
COL22A1Q8NFW1 CDCA3-207ENST00000538862 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
COL22A1Q8NFW1 TUBB2A-201ENST00000333628 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
COL22A1Q8NFW1 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
COL22A1Q8NFW1 AL357833.1-201ENST00000413993 832 ntTSL 3 BASIC18.63■□□□□ 0.57
COL22A1Q8NFW1 AC090696.1-201ENST00000419100 418 ntTSL 3 BASIC18.63■□□□□ 0.57
COL22A1Q8NFW1 AC113398.1-201ENST00000464124 406 ntBASIC18.63■□□□□ 0.57
COL22A1Q8NFW1 GYG1-209ENST00000483267 801 ntTSL 2 BASIC18.63■□□□□ 0.57
COL22A1Q8NFW1 ABCD1P3-201ENST00000562927 605 ntBASIC18.63■□□□□ 0.57
COL22A1Q8NFW1 AC092720.1-202ENST00000565824 555 ntTSL 4 BASIC18.63■□□□□ 0.57
COL22A1Q8NFW1 AP006248.1-201ENST00000610471 67 ntBASIC18.63■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 44.2 ms