Protein–RNA interactions for Protein: Q8N1B4

VPS52, Vacuolar protein sorting-associated protein 52 homolog, humanhuman

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52Q8N1B4 LINC00642-202ENST00000442515 670 ntTSL 3 BASIC15.91■□□□□ 0.14
VPS52Q8N1B4 AC092800.1-201ENST00000449492 579 ntTSL 2 BASIC15.91■□□□□ 0.14
VPS52Q8N1B4 AL136982.2-201ENST00000451760 234 ntTSL 5 BASIC15.91■□□□□ 0.14
VPS52Q8N1B4 LIMS3-205ENST00000487150 782 ntTSL 3 BASIC15.91■□□□□ 0.14
VPS52Q8N1B4 AP001547.1-201ENST00000527440 374 ntTSL 3 BASIC15.91■□□□□ 0.14
VPS52Q8N1B4 AC015660.1-201ENST00000560103 395 ntTSL 3 BASIC15.91■□□□□ 0.14
VPS52Q8N1B4 CDIP1-202ENST00000562334 1205 ntTSL 2 BASIC15.91■□□□□ 0.14
VPS52Q8N1B4 NAT9-224ENST00000583757 583 ntTSL 3 BASIC15.91■□□□□ 0.14
VPS52Q8N1B4 AC090386.1-202ENST00000586610 469 ntTSL 3 BASIC15.91■□□□□ 0.14
VPS52Q8N1B4 PYY-202ENST00000592796 580 ntAPPRIS ALT1 TSL 1 (best) BASIC15.91■□□□□ 0.14
VPS52Q8N1B4 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
VPS52Q8N1B4 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
VPS52Q8N1B4 LINC00528-201ENST00000600723 2160 ntBASIC15.91■□□□□ 0.14
VPS52Q8N1B4 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
VPS52Q8N1B4 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC15.91■□□□□ 0.14
VPS52Q8N1B4 PTOV1-214ENST00000600603 1443 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
VPS52Q8N1B4 CICP23-201ENST00000605013 2741 ntBASIC15.91■□□□□ 0.14
VPS52Q8N1B4 NRAS-201ENST00000369535 4449 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
VPS52Q8N1B4 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC15.91■□□□□ 0.14
VPS52Q8N1B4 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC15.91■□□□□ 0.14
VPS52Q8N1B4 DENND1B-211ENST00000620048 8378 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
VPS52Q8N1B4 FMO5-201ENST00000254090 2632 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
VPS52Q8N1B4 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
VPS52Q8N1B4 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
VPS52Q8N1B4 CD27-201ENST00000266557 1338 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
VPS52Q8N1B4 KLK11-207ENST00000594768 1347 ntAPPRIS P4 TSL 1 (best) BASIC15.91■□□□□ 0.14
VPS52Q8N1B4 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
VPS52Q8N1B4 AC013726.1-201ENST00000563747 2285 ntBASIC15.91■□□□□ 0.14
VPS52Q8N1B4 SEPT12-201ENST00000268231 1469 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
VPS52Q8N1B4 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC15.9■□□□□ 0.14
VPS52Q8N1B4 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
VPS52Q8N1B4 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC15.9■□□□□ 0.14
VPS52Q8N1B4 TBC1D8B-203ENST00000357242 5717 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
VPS52Q8N1B4 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
VPS52Q8N1B4 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
VPS52Q8N1B4 AMT-239ENST00000636865 1914 ntTSL 5 BASIC15.9■□□□□ 0.14
VPS52Q8N1B4 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
VPS52Q8N1B4 KCP-206ENST00000613019 4853 ntAPPRIS P5 TSL 5 BASIC15.9■□□□□ 0.14
VPS52Q8N1B4 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
VPS52Q8N1B4 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
VPS52Q8N1B4 MAPK4-201ENST00000400384 4770 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
VPS52Q8N1B4 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
VPS52Q8N1B4 AP000356.1-201ENST00000438893 364 ntTSL 3 BASIC15.9■□□□□ 0.14
VPS52Q8N1B4 KLF2P1-201ENST00000447438 1042 ntBASIC15.9■□□□□ 0.14
VPS52Q8N1B4 AC234782.1-201ENST00000451950 919 ntBASIC15.9■□□□□ 0.14
VPS52Q8N1B4 PGAP2-224ENST00000490830 810 ntTSL 3 BASIC15.9■□□□□ 0.14
VPS52Q8N1B4 AC106738.2-201ENST00000559802 557 ntTSL 4 BASIC15.9■□□□□ 0.14
VPS52Q8N1B4 AC145343.1-201ENST00000579629 650 ntTSL 3 BASIC15.9■□□□□ 0.14
VPS52Q8N1B4 LGALS9C-215ENST00000584941 1104 ntTSL 5 BASIC15.9■□□□□ 0.14
VPS52Q8N1B4 AC008805.1-201ENST00000590892 364 ntBASIC15.9■□□□□ 0.14
VPS52Q8N1B4 AC020922.3-201ENST00000595064 547 ntBASIC15.9■□□□□ 0.14
VPS52Q8N1B4 AC132192.2-201ENST00000596206 1147 ntBASIC15.9■□□□□ 0.14
VPS52Q8N1B4 SRD5A3-AS1-211ENST00000599135 737 ntTSL 5 BASIC15.9■□□□□ 0.14
VPS52Q8N1B4 AL132994.2-201ENST00000603120 687 ntBASIC15.9■□□□□ 0.14
VPS52Q8N1B4 U62317.3-201ENST00000608319 855 ntBASIC15.9■□□□□ 0.14
VPS52Q8N1B4 NDUFB5-216ENST00000611971 951 ntTSL 2 BASIC15.9■□□□□ 0.14
VPS52Q8N1B4 AC234782.2-201ENST00000614615 1240 ntTSL 2 BASIC15.9■□□□□ 0.14
VPS52Q8N1B4 AL353770.1-201ENST00000614915 403 ntBASIC15.9■□□□□ 0.14
VPS52Q8N1B4 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC15.9■□□□□ 0.14
VPS52Q8N1B4 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
VPS52Q8N1B4 RAPH1-202ENST00000319170 9808 ntAPPRIS P4 TSL 1 (best) BASIC15.9■□□□□ 0.14
VPS52Q8N1B4 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC15.9■□□□□ 0.14
VPS52Q8N1B4 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
VPS52Q8N1B4 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
VPS52Q8N1B4 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
VPS52Q8N1B4 ROCK1-201ENST00000399799 9484 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
VPS52Q8N1B4 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
VPS52Q8N1B4 UBXN11-207ENST00000374223 1312 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
VPS52Q8N1B4 AL138725.1-201ENST00000407347 1314 ntBASIC15.9■□□□□ 0.14
VPS52Q8N1B4 SLC41A3-211ENST00000508835 1480 ntTSL 2 BASIC15.9■□□□□ 0.14
VPS52Q8N1B4 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
VPS52Q8N1B4 PEF1-201ENST00000373703 1629 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
VPS52Q8N1B4 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
VPS52Q8N1B4 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC15.9■□□□□ 0.14
VPS52Q8N1B4 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
VPS52Q8N1B4 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
VPS52Q8N1B4 B3GAT2-201ENST00000230053 6565 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
VPS52Q8N1B4 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
VPS52Q8N1B4 AC244394.1-201ENST00000435000 1665 ntBASIC15.89■□□□□ 0.13
VPS52Q8N1B4 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
VPS52Q8N1B4 ASAP1-202ENST00000518721 5507 ntAPPRIS P3 TSL 5 BASIC15.89■□□□□ 0.13
VPS52Q8N1B4 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
VPS52Q8N1B4 POLL-206ENST00000370172 2308 ntTSL 2 BASIC15.89■□□□□ 0.13
VPS52Q8N1B4 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
VPS52Q8N1B4 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC15.89■□□□□ 0.13
VPS52Q8N1B4 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
VPS52Q8N1B4 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
VPS52Q8N1B4 CENPK-202ENST00000396679 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
VPS52Q8N1B4 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
VPS52Q8N1B4 SUSD5-201ENST00000309558 5008 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
VPS52Q8N1B4 MVK-214ENST00000629016 1591 ntTSL 5 BASIC15.89■□□□□ 0.13
VPS52Q8N1B4 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
VPS52Q8N1B4 MYL6-219ENST00000551589 1438 ntAPPRIS ALT1 TSL 2 BASIC15.89■□□□□ 0.13
VPS52Q8N1B4 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
VPS52Q8N1B4 EDF1-202ENST00000371648 809 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
VPS52Q8N1B4 COL5A1-AS1-201ENST00000371813 336 ntTSL 2 BASIC15.89■□□□□ 0.13
VPS52Q8N1B4 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
VPS52Q8N1B4 PARVG-202ENST00000415224 999 ntTSL 2 BASIC15.89■□□□□ 0.13
VPS52Q8N1B4 AC012441.2-201ENST00000444843 739 ntBASIC15.89■□□□□ 0.13
VPS52Q8N1B4 RAMP3-202ENST00000481345 559 ntAPPRIS P2 TSL 4 BASIC15.89■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 42.1 ms