Protein–RNA interactions for Protein: Q8IZH2

XRN1, 5'-3' exoribonuclease 1, humanhuman

Known RBP Predictions only

Length 1,706 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1Q8IZH2 CLUL1-202ENST00000400606 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
XRN1Q8IZH2 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC19.5■□□□□ 0.71
XRN1Q8IZH2 GRIA3-208ENST00000620581 2991 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
XRN1Q8IZH2 LINC00882-204ENST00000484698 2718 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
XRN1Q8IZH2 CPPED1-201ENST00000261660 1898 ntTSL 2 BASIC19.5■□□□□ 0.71
XRN1Q8IZH2 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
XRN1Q8IZH2 GPM6B-202ENST00000355135 1673 ntAPPRIS ALT1 TSL 1 (best) BASIC19.5■□□□□ 0.71
XRN1Q8IZH2 LRP5L-202ENST00000402859 1661 ntAPPRIS P2 TSL 5 BASIC19.5■□□□□ 0.71
XRN1Q8IZH2 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
XRN1Q8IZH2 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
XRN1Q8IZH2 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
XRN1Q8IZH2 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC19.5■□□□□ 0.71
XRN1Q8IZH2 AC090505.1-201ENST00000430515 1834 ntBASIC19.5■□□□□ 0.71
XRN1Q8IZH2 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
XRN1Q8IZH2 ATP5H-202ENST00000344546 553 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
XRN1Q8IZH2 SFMBT2-202ENST00000379711 692 ntTSL 5 BASIC19.5■□□□□ 0.71
XRN1Q8IZH2 HNRNPA1P10-201ENST00000444945 962 ntBASIC19.5■□□□□ 0.71
XRN1Q8IZH2 CMPK1-204ENST00000450808 950 ntTSL 2 BASIC19.5■□□□□ 0.71
XRN1Q8IZH2 AC137579.2-201ENST00000517714 551 ntTSL 4 BASIC19.5■□□□□ 0.71
XRN1Q8IZH2 AC012593.1-214ENST00000586952 767 ntTSL 5 BASIC19.5■□□□□ 0.71
XRN1Q8IZH2 AC016582.2-202ENST00000587765 1094 ntBASIC19.5■□□□□ 0.71
XRN1Q8IZH2 ZNF677-210ENST00000601413 706 ntTSL 2 BASIC19.5■□□□□ 0.71
XRN1Q8IZH2 AL645608.7-201ENST00000607769 351 ntTSL 4 BASIC19.5■□□□□ 0.71
XRN1Q8IZH2 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
XRN1Q8IZH2 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
XRN1Q8IZH2 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
XRN1Q8IZH2 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
XRN1Q8IZH2 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC19.5■□□□□ 0.71
XRN1Q8IZH2 LHFPL1-201ENST00000371968 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
XRN1Q8IZH2 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
XRN1Q8IZH2 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
XRN1Q8IZH2 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC19.49■□□□□ 0.71
XRN1Q8IZH2 SLC13A5-202ENST00000381074 1738 ntTSL 2 BASIC19.49■□□□□ 0.71
XRN1Q8IZH2 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
XRN1Q8IZH2 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
XRN1Q8IZH2 EPN2-210ENST00000571254 1883 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
XRN1Q8IZH2 MIR611-201ENST00000384869 67 ntBASIC19.49■□□□□ 0.71
XRN1Q8IZH2 STAG3L3-203ENST00000436857 1033 ntTSL 2 BASIC19.49■□□□□ 0.71
XRN1Q8IZH2 AL451069.3-201ENST00000450206 1013 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
XRN1Q8IZH2 F10-201ENST00000375551 1509 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
XRN1Q8IZH2 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
XRN1Q8IZH2 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
XRN1Q8IZH2 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
XRN1Q8IZH2 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
XRN1Q8IZH2 PSMC5-201ENST00000310144 1579 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
XRN1Q8IZH2 AAAS-202ENST00000394384 1703 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
XRN1Q8IZH2 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC19.49■□□□□ 0.71
XRN1Q8IZH2 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC19.49■□□□□ 0.71
XRN1Q8IZH2 AC064850.1-201ENST00000413279 1398 ntBASIC19.49■□□□□ 0.71
XRN1Q8IZH2 MECR-202ENST00000373791 2416 ntTSL 2 BASIC19.49■□□□□ 0.71
XRN1Q8IZH2 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC19.49■□□□□ 0.71
XRN1Q8IZH2 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
XRN1Q8IZH2 EFHC1-230ENST00000637263 2089 ntTSL 5 BASIC19.48■□□□□ 0.71
XRN1Q8IZH2 FCN2-202ENST00000350339 943 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
XRN1Q8IZH2 PPP1R7-205ENST00000404405 1009 ntTSL 3 BASIC19.48■□□□□ 0.71
XRN1Q8IZH2 AL137244.1-201ENST00000422931 865 ntBASIC19.48■□□□□ 0.71
XRN1Q8IZH2 TRAPPC4-202ENST00000434101 794 ntTSL 2 BASIC19.48■□□□□ 0.71
XRN1Q8IZH2 SMAD9-IT1-201ENST00000437983 504 ntTSL 3 BASIC19.48■□□□□ 0.71
XRN1Q8IZH2 PRSS55-203ENST00000522210 1005 ntTSL 2 BASIC19.48■□□□□ 0.71
XRN1Q8IZH2 C11orf58-207ENST00000525684 575 ntTSL 2 BASIC19.48■□□□□ 0.71
XRN1Q8IZH2 DHDDS-217ENST00000526219 1072 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
XRN1Q8IZH2 C11orf58-209ENST00000528634 776 ntTSL 5 BASIC19.48■□□□□ 0.71
XRN1Q8IZH2 ZNF671-203ENST00000596939 977 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
XRN1Q8IZH2 ASNA1-205ENST00000611688 1214 ntTSL 5 BASIC19.48■□□□□ 0.71
XRN1Q8IZH2 AC245100.4-201ENST00000634549 1082 ntTSL 5 BASIC19.48■□□□□ 0.71
XRN1Q8IZH2 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
XRN1Q8IZH2 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
XRN1Q8IZH2 CHIT1-201ENST00000255427 1598 ntTSL 2 BASIC19.48■□□□□ 0.71
XRN1Q8IZH2 LDB3-204ENST00000372066 1598 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
XRN1Q8IZH2 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
XRN1Q8IZH2 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC19.48■□□□□ 0.71
XRN1Q8IZH2 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
XRN1Q8IZH2 DACT3-AS1-201ENST00000500689 1304 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
XRN1Q8IZH2 TMEM145-203ENST00000598766 2011 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
XRN1Q8IZH2 CICP6-201ENST00000457191 2729 ntBASIC19.48■□□□□ 0.71
XRN1Q8IZH2 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
XRN1Q8IZH2 AC132872.4-202ENST00000622924 2756 ntBASIC19.48■□□□□ 0.71
XRN1Q8IZH2 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
XRN1Q8IZH2 AKR1B1-201ENST00000285930 1409 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
XRN1Q8IZH2 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
XRN1Q8IZH2 DDC-204ENST00000426377 1700 ntTSL 3 BASIC19.48■□□□□ 0.71
XRN1Q8IZH2 KCNK15-AS1-203ENST00000427598 862 ntTSL 2 BASIC19.48■□□□□ 0.71
XRN1Q8IZH2 PSME2P2-201ENST00000453033 700 ntBASIC19.48■□□□□ 0.71
XRN1Q8IZH2 AC147876.1-201ENST00000504408 322 ntBASIC19.48■□□□□ 0.71
XRN1Q8IZH2 RNA5SP420-201ENST00000516997 137 ntBASIC19.48■□□□□ 0.71
XRN1Q8IZH2 AC007298.2-201ENST00000551849 862 ntTSL 3 BASIC19.48■□□□□ 0.71
XRN1Q8IZH2 AC105133.1-201ENST00000559749 742 ntTSL 3 BASIC19.48■□□□□ 0.71
XRN1Q8IZH2 AC142086.5-202ENST00000562500 217 ntBASIC19.48■□□□□ 0.71
XRN1Q8IZH2 MYMX-201ENST00000573382 817 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
XRN1Q8IZH2 AL162731.1-201ENST00000613248 876 ntTSL 3 BASIC19.48■□□□□ 0.71
XRN1Q8IZH2 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
XRN1Q8IZH2 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC19.48■□□□□ 0.71
XRN1Q8IZH2 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC19.47■□□□□ 0.71
XRN1Q8IZH2 RN7SL832P-201ENST00000607781 1756 ntBASIC19.47■□□□□ 0.71
XRN1Q8IZH2 FAM9B-201ENST00000327220 1340 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
XRN1Q8IZH2 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC19.47■□□□□ 0.71
XRN1Q8IZH2 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC19.47■□□□□ 0.71
XRN1Q8IZH2 AL050341.2-201ENST00000567508 1541 ntBASIC19.47■□□□□ 0.71
XRN1Q8IZH2 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC19.47■□□□□ 0.71
XRN1Q8IZH2 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC19.47■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms