Protein–RNA interactions for Protein: Q8IVM7

LINC00346, Putative uncharacterized protein encoded by LINC00346, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00346Q8IVM7 MED20-201ENST00000265350 2438 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
LINC00346Q8IVM7 LOXL3-202ENST00000393937 2398 ntTSL 5 BASIC12.99□□□□□ -0.33
LINC00346Q8IVM7 CRTC1-202ENST00000338797 6929 ntAPPRIS ALT1 TSL 1 (best) BASIC12.99□□□□□ -0.33
LINC00346Q8IVM7 WDR33-201ENST00000322313 9471 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
LINC00346Q8IVM7 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
LINC00346Q8IVM7 ILDR1-205ENST00000462014 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
LINC00346Q8IVM7 TP73-213ENST00000604479 1623 ntTSL 5 BASIC12.99□□□□□ -0.33
LINC00346Q8IVM7 CHIT1-202ENST00000367229 2246 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
LINC00346Q8IVM7 HDAC11-213ENST00000437379 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
LINC00346Q8IVM7 PDE8A-201ENST00000310298 3984 ntAPPRIS P4 TSL 1 (best) BASIC12.98□□□□□ -0.33
LINC00346Q8IVM7 DHTKD1-201ENST00000263035 5159 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
LINC00346Q8IVM7 NAALADL1-202ENST00000355721 2100 ntTSL 5 BASIC12.98□□□□□ -0.33
LINC00346Q8IVM7 MPP2-214ENST00000523501 2121 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
LINC00346Q8IVM7 ZNF785-201ENST00000395216 3282 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
LINC00346Q8IVM7 PLCXD2-201ENST00000393934 2063 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
LINC00346Q8IVM7 NUDT4-201ENST00000337179 9753 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
LINC00346Q8IVM7 RPP14-202ENST00000445193 7985 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
LINC00346Q8IVM7 TNFAIP8L1-201ENST00000327473 3814 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
LINC00346Q8IVM7 TNFAIP8L1-202ENST00000536716 3845 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
LINC00346Q8IVM7 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC12.98□□□□□ -0.33
LINC00346Q8IVM7 ARID3B-206ENST00000622429 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
LINC00346Q8IVM7 NMBR-201ENST00000258042 1354 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
LINC00346Q8IVM7 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
LINC00346Q8IVM7 RHOH-218ENST00000613272 1865 ntAPPRIS P1 TSL 3 BASIC12.98□□□□□ -0.33
LINC00346Q8IVM7 SUOX-201ENST00000266971 2364 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
LINC00346Q8IVM7 PRSS30P-201ENST00000390681 2881 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
LINC00346Q8IVM7 LINC00299-202ENST00000442956 2342 ntTSL 2 BASIC12.98□□□□□ -0.33
LINC00346Q8IVM7 NRP2-201ENST00000272849 5909 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
LINC00346Q8IVM7 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC12.98□□□□□ -0.33
LINC00346Q8IVM7 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
LINC00346Q8IVM7 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
LINC00346Q8IVM7 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
LINC00346Q8IVM7 GUK1-206ENST00000366723 845 ntTSL 5 BASIC12.98□□□□□ -0.33
LINC00346Q8IVM7 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC12.98□□□□□ -0.33
LINC00346Q8IVM7 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC12.98□□□□□ -0.33
LINC00346Q8IVM7 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC12.98□□□□□ -0.33
LINC00346Q8IVM7 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
LINC00346Q8IVM7 C2orf27AP3-201ENST00000434123 579 ntBASIC12.98□□□□□ -0.33
LINC00346Q8IVM7 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
LINC00346Q8IVM7 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
LINC00346Q8IVM7 SLC25A47P1-201ENST00000531577 414 ntBASIC12.98□□□□□ -0.33
LINC00346Q8IVM7 AC132938.2-201ENST00000579188 680 ntBASIC12.98□□□□□ -0.33
LINC00346Q8IVM7 AL354718.3-201ENST00000616414 581 ntBASIC12.98□□□□□ -0.33
LINC00346Q8IVM7 CR382287.1-201ENST00000623954 586 ntBASIC12.98□□□□□ -0.33
LINC00346Q8IVM7 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC12.98□□□□□ -0.33
LINC00346Q8IVM7 AL591163.1-201ENST00000641757 987 ntBASIC12.98□□□□□ -0.33
LINC00346Q8IVM7 ARMCX6-207ENST00000538627 1758 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
LINC00346Q8IVM7 B3GAT1-203ENST00000524765 5737 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
LINC00346Q8IVM7 EPHB4-210ENST00000616502 3737 ntTSL 5 BASIC12.98□□□□□ -0.33
LINC00346Q8IVM7 KIFC3-204ENST00000465878 3225 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
LINC00346Q8IVM7 CBX6-201ENST00000216083 3191 ntAPPRIS ALT2 TSL 2 BASIC12.98□□□□□ -0.33
LINC00346Q8IVM7 NFE2L2-202ENST00000397063 2651 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
LINC00346Q8IVM7 SFXN3-201ENST00000224807 3089 ntTSL 5 BASIC12.98□□□□□ -0.33
LINC00346Q8IVM7 FLOT2-210ENST00000585169 2585 ntAPPRIS ALT1 TSL 5 BASIC12.98□□□□□ -0.33
LINC00346Q8IVM7 KDM6B-201ENST00000254846 6713 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
LINC00346Q8IVM7 PEG13-201ENST00000631594 5667 ntBASIC12.98□□□□□ -0.33
LINC00346Q8IVM7 ROBO4-201ENST00000306534 4710 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
LINC00346Q8IVM7 LBH-201ENST00000395323 2933 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
LINC00346Q8IVM7 DESI2-202ENST00000302550 4208 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
LINC00346Q8IVM7 DNMT3B-204ENST00000353855 4237 ntTSL 5 BASIC12.98□□□□□ -0.33
LINC00346Q8IVM7 ANGPTL2-202ENST00000373425 3707 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
LINC00346Q8IVM7 KDM2B-202ENST00000377071 4595 ntAPPRIS P4 TSL 1 (best) BASIC12.98□□□□□ -0.33
LINC00346Q8IVM7 FGD6-203ENST00000546711 4568 ntTSL 5 BASIC12.98□□□□□ -0.33
LINC00346Q8IVM7 SLC25A21-AS1-201ENST00000556667 1924 ntBASIC12.98□□□□□ -0.33
LINC00346Q8IVM7 LINC02396-202ENST00000550636 2324 ntTSL 2 BASIC12.97□□□□□ -0.33
LINC00346Q8IVM7 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
LINC00346Q8IVM7 F10-203ENST00000409306 1450 ntTSL 3 BASIC12.97□□□□□ -0.33
LINC00346Q8IVM7 AP000593.2-201ENST00000542775 1433 ntBASIC12.97□□□□□ -0.33
LINC00346Q8IVM7 PAF1-204ENST00000595564 1810 ntAPPRIS ALT2 TSL 2 BASIC12.97□□□□□ -0.33
LINC00346Q8IVM7 GDF9-201ENST00000296875 1796 ntTSL 5 BASIC12.97□□□□□ -0.33
LINC00346Q8IVM7 NOX5-203ENST00000448182 2498 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
LINC00346Q8IVM7 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
LINC00346Q8IVM7 ASF1A-201ENST00000229595 2362 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
LINC00346Q8IVM7 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
LINC00346Q8IVM7 CASC10-201ENST00000377113 3801 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
LINC00346Q8IVM7 AC005229.1-201ENST00000392885 409 ntBASIC12.97□□□□□ -0.33
LINC00346Q8IVM7 MPV17-205ENST00000402310 906 ntTSL 5 BASIC12.97□□□□□ -0.33
LINC00346Q8IVM7 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC12.97□□□□□ -0.33
LINC00346Q8IVM7 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC12.97□□□□□ -0.33
LINC00346Q8IVM7 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
LINC00346Q8IVM7 FAM197Y7-201ENST00000432892 766 ntBASIC12.97□□□□□ -0.33
LINC00346Q8IVM7 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
LINC00346Q8IVM7 TTTY23B-201ENST00000442790 549 ntBASIC12.97□□□□□ -0.33
LINC00346Q8IVM7 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC12.97□□□□□ -0.33
LINC00346Q8IVM7 PUDPP3-201ENST00000445368 636 ntBASIC12.97□□□□□ -0.33
LINC00346Q8IVM7 FTH1P14-201ENST00000482930 551 ntBASIC12.97□□□□□ -0.33
LINC00346Q8IVM7 USP32P1-208ENST00000506594 1164 ntBASIC12.97□□□□□ -0.33
LINC00346Q8IVM7 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC12.97□□□□□ -0.33
LINC00346Q8IVM7 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC12.97□□□□□ -0.33
LINC00346Q8IVM7 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
LINC00346Q8IVM7 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC12.97□□□□□ -0.33
LINC00346Q8IVM7 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC12.97□□□□□ -0.33
LINC00346Q8IVM7 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC12.97□□□□□ -0.33
LINC00346Q8IVM7 AC008735.3-201ENST00000596646 500 ntBASIC12.97□□□□□ -0.33
LINC00346Q8IVM7 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
LINC00346Q8IVM7 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC12.97□□□□□ -0.33
LINC00346Q8IVM7 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC12.97□□□□□ -0.33
LINC00346Q8IVM7 MIR6074-201ENST00000612054 107 ntBASIC12.97□□□□□ -0.33
LINC00346Q8IVM7 AC244669.2-201ENST00000612320 853 ntBASIC12.97□□□□□ -0.33
LINC00346Q8IVM7 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 47.1 ms