Protein–RNA interactions for Protein: Q5VTQ0

TTC39B, Tetratricopeptide repeat protein 39B, humanhuman

Predicted RBP Predictions only

Length 682 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39BQ5VTQ0 PRAMEF25-202ENST00000619661 1840 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
TTC39BQ5VTQ0 MAGIX-208ENST00000616266 3295 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
TTC39BQ5VTQ0 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TTC39BQ5VTQ0 PIK3CG-201ENST00000359195 5377 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TTC39BQ5VTQ0 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC15.26■□□□□ 0.03
TTC39BQ5VTQ0 CAMKK2-202ENST00000337174 5304 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
TTC39BQ5VTQ0 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
TTC39BQ5VTQ0 ANK1-201ENST00000265709 6379 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
TTC39BQ5VTQ0 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
TTC39BQ5VTQ0 UBE2I-201ENST00000325437 2832 ntAPPRIS P1 TSL 3 BASIC15.26■□□□□ 0.03
TTC39BQ5VTQ0 CBX3-203ENST00000409747 1717 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
TTC39BQ5VTQ0 EFCAB2-202ENST00000366522 6167 ntTSL 2 BASIC15.26■□□□□ 0.03
TTC39BQ5VTQ0 HNRNPUL1-205ENST00000593587 2725 ntTSL 2 BASIC15.26■□□□□ 0.03
TTC39BQ5VTQ0 IL17RD-201ENST00000296318 8720 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TTC39BQ5VTQ0 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
TTC39BQ5VTQ0 CCNDBP1-201ENST00000300213 3660 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TTC39BQ5VTQ0 SPIN2A-201ENST00000374906 1319 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TTC39BQ5VTQ0 CLASP2-204ENST00000399362 7282 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
TTC39BQ5VTQ0 NEU2-201ENST00000233840 1143 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TTC39BQ5VTQ0 CCDC88B-201ENST00000301897 870 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
TTC39BQ5VTQ0 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TTC39BQ5VTQ0 RAB4B-201ENST00000357052 1133 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TTC39BQ5VTQ0 FGF14-202ENST00000376143 744 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TTC39BQ5VTQ0 MOGAT3-202ENST00000379423 933 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
TTC39BQ5VTQ0 GLIS3-AS1-201ENST00000451340 734 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
TTC39BQ5VTQ0 SNHG12-210ENST00000483436 682 ntTSL 3 BASIC15.26■□□□□ 0.03
TTC39BQ5VTQ0 CRYGN-205ENST00000491928 698 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
TTC39BQ5VTQ0 AC129510.1-201ENST00000579979 555 ntTSL 3 BASIC15.26■□□□□ 0.03
TTC39BQ5VTQ0 AC104982.3-201ENST00000581995 514 ntBASIC15.26■□□□□ 0.03
TTC39BQ5VTQ0 DKKL1-202ENST00000594268 524 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
TTC39BQ5VTQ0 AL121944.1-201ENST00000605945 686 ntTSL 2 BASIC15.26■□□□□ 0.03
TTC39BQ5VTQ0 MIR6869-201ENST00000619434 62 ntBASIC15.26■□□□□ 0.03
TTC39BQ5VTQ0 AC099795.1-202ENST00000640492 759 ntTSL 5 BASIC15.26■□□□□ 0.03
TTC39BQ5VTQ0 TRAK1-203ENST00000396175 5033 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
TTC39BQ5VTQ0 BAK1-201ENST00000360661 2132 ntTSL 5 BASIC15.26■□□□□ 0.03
TTC39BQ5VTQ0 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
TTC39BQ5VTQ0 ICA1-207ENST00000406470 2440 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
TTC39BQ5VTQ0 NTNG1-208ENST00000370074 3048 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
TTC39BQ5VTQ0 TBC1D1-201ENST00000261439 5700 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TTC39BQ5VTQ0 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC15.26■□□□□ 0.03
TTC39BQ5VTQ0 GABRA1-201ENST00000023897 2083 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TTC39BQ5VTQ0 SEPT12-201ENST00000268231 1469 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TTC39BQ5VTQ0 SYT5-201ENST00000354308 3792 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TTC39BQ5VTQ0 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TTC39BQ5VTQ0 TCAF1-205ENST00000479870 5733 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
TTC39BQ5VTQ0 SPTLC2-201ENST00000216484 8170 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TTC39BQ5VTQ0 SORCS2-201ENST00000329016 5582 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
TTC39BQ5VTQ0 UBE2G2-202ENST00000345496 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TTC39BQ5VTQ0 PCNX4-203ENST00000406854 4666 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
TTC39BQ5VTQ0 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC15.25■□□□□ 0.03
TTC39BQ5VTQ0 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
TTC39BQ5VTQ0 PHF24-201ENST00000242315 5718 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TTC39BQ5VTQ0 FLII-201ENST00000327031 4338 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TTC39BQ5VTQ0 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TTC39BQ5VTQ0 AP4M1-201ENST00000359593 1817 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TTC39BQ5VTQ0 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC15.25■□□□□ 0.03
TTC39BQ5VTQ0 TIE1-201ENST00000372476 3882 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TTC39BQ5VTQ0 GDF11-201ENST00000257868 8657 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
TTC39BQ5VTQ0 CRABP1-201ENST00000299529 772 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TTC39BQ5VTQ0 FZR1-201ENST00000313639 1215 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
TTC39BQ5VTQ0 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
TTC39BQ5VTQ0 AK6-201ENST00000380818 1183 ntTSL 2 BASIC15.25■□□□□ 0.03
TTC39BQ5VTQ0 AL391361.3-201ENST00000420601 379 ntTSL 2 BASIC15.25■□□□□ 0.03
TTC39BQ5VTQ0 SNHG14-209ENST00000456576 544 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
TTC39BQ5VTQ0 AC108725.1-201ENST00000495472 409 ntBASIC15.25■□□□□ 0.03
TTC39BQ5VTQ0 GDNF-AS1-201ENST00000503382 604 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
TTC39BQ5VTQ0 IFITM1-204ENST00000528780 730 ntAPPRIS P1 TSL 3 BASIC15.25■□□□□ 0.03
TTC39BQ5VTQ0 ERICH5-202ENST00000545282 596 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
TTC39BQ5VTQ0 CD63-214ENST00000552692 949 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TTC39BQ5VTQ0 AC120498.1-201ENST00000563593 476 ntTSL 4 BASIC15.25■□□□□ 0.03
TTC39BQ5VTQ0 AP003096.1-203ENST00000564469 563 ntTSL 3 BASIC15.25■□□□□ 0.03
TTC39BQ5VTQ0 DUX4L46-201ENST00000566845 751 ntBASIC15.25■□□□□ 0.03
TTC39BQ5VTQ0 CRISPLD2-210ENST00000569090 808 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
TTC39BQ5VTQ0 C1QTNF1-AS1-202ENST00000581579 865 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
TTC39BQ5VTQ0 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC15.25■□□□□ 0.03
TTC39BQ5VTQ0 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
TTC39BQ5VTQ0 BAIAP3-216ENST00000628027 4732 ntTSL 5 BASIC15.25■□□□□ 0.03
TTC39BQ5VTQ0 PLEKHO2-201ENST00000323544 3720 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TTC39BQ5VTQ0 MIOS-201ENST00000340080 3453 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TTC39BQ5VTQ0 PDPR-202ENST00000398122 2734 ntTSL 2 BASIC15.25■□□□□ 0.03
TTC39BQ5VTQ0 SLC35A1-202ENST00000369556 1720 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
TTC39BQ5VTQ0 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TTC39BQ5VTQ0 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC15.25■□□□□ 0.03
TTC39BQ5VTQ0 RAB2A-201ENST00000262646 3848 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TTC39BQ5VTQ0 TMEM117-207ENST00000551577 2643 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
TTC39BQ5VTQ0 STYXL1-201ENST00000248600 1415 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TTC39BQ5VTQ0 SNAP47-203ENST00000366760 1446 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
TTC39BQ5VTQ0 TATDN3-202ENST00000366974 2389 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
TTC39BQ5VTQ0 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC15.25■□□□□ 0.03
TTC39BQ5VTQ0 PPIL2-202ENST00000398831 2574 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TTC39BQ5VTQ0 GAK-201ENST00000314167 4442 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TTC39BQ5VTQ0 NRAS-201ENST00000369535 4449 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TTC39BQ5VTQ0 COL6A2-201ENST00000300527 3461 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TTC39BQ5VTQ0 AL136172.1-201ENST00000598590 1394 ntBASIC15.24■□□□□ 0.03
TTC39BQ5VTQ0 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
TTC39BQ5VTQ0 ZNF655-212ENST00000424881 4666 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
TTC39BQ5VTQ0 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC15.24■□□□□ 0.03
TTC39BQ5VTQ0 LINC01138-206ENST00000622328 2212 ntTSL 2 BASIC15.24■□□□□ 0.03
TTC39BQ5VTQ0 OPN4-202ENST00000372071 2401 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
TTC39BQ5VTQ0 PRICKLE1-201ENST00000345127 5902 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 88.7 ms