Protein–RNA interactions for Protein: Q495D7

LINC01559, Putative uncharacterized protein encoded by LINC01559, humanhuman

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01559Q495D7 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
LINC01559Q495D7 PLXNB2-201ENST00000359337 6335 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
LINC01559Q495D7 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
LINC01559Q495D7 Z97205.2-201ENST00000564697 1639 ntBASIC11.31□□□□□ -0.6
LINC01559Q495D7 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC11.31□□□□□ -0.6
LINC01559Q495D7 CBFA2T3-201ENST00000268679 4477 ntAPPRIS P4 TSL 1 (best) BASIC11.31□□□□□ -0.6
LINC01559Q495D7 SEZ6L-202ENST00000343706 2898 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
LINC01559Q495D7 MYLK-203ENST00000359169 7585 ntAPPRIS P3 TSL 5 BASIC11.3□□□□□ -0.6
LINC01559Q495D7 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
LINC01559Q495D7 AL035456.1-201ENST00000456064 1369 ntBASIC11.3□□□□□ -0.6
LINC01559Q495D7 AC096656.1-201ENST00000623826 1364 ntBASIC11.3□□□□□ -0.6
LINC01559Q495D7 TRIM45-201ENST00000256649 3515 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
LINC01559Q495D7 SEPT9-220ENST00000588690 2919 ntTSL 5 BASIC11.3□□□□□ -0.6
LINC01559Q495D7 ABCA2-203ENST00000371605 8151 ntAPPRIS ALT2 TSL 2 BASIC11.3□□□□□ -0.6
LINC01559Q495D7 FGFR1-202ENST00000335922 4157 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
LINC01559Q495D7 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
LINC01559Q495D7 MCM9-202ENST00000316316 5101 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
LINC01559Q495D7 NAA15-201ENST00000296543 6222 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
LINC01559Q495D7 EDEM3-201ENST00000318130 6898 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
LINC01559Q495D7 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC11.3□□□□□ -0.6
LINC01559Q495D7 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC11.3□□□□□ -0.6
LINC01559Q495D7 NUCB1-201ENST00000405315 2668 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
LINC01559Q495D7 APP-205ENST00000358918 2366 ntTSL 5 BASIC11.3□□□□□ -0.6
LINC01559Q495D7 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
LINC01559Q495D7 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
LINC01559Q495D7 RNY3P9-201ENST00000384727 106 ntBASIC11.3□□□□□ -0.6
LINC01559Q495D7 YBX2P1-201ENST00000394192 760 ntBASIC11.3□□□□□ -0.6
LINC01559Q495D7 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC11.3□□□□□ -0.6
LINC01559Q495D7 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC11.3□□□□□ -0.6
LINC01559Q495D7 AL590762.3-201ENST00000436372 640 ntBASIC11.3□□□□□ -0.6
LINC01559Q495D7 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC11.3□□□□□ -0.6
LINC01559Q495D7 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC11.3□□□□□ -0.6
LINC01559Q495D7 KRT18P43-201ENST00000469825 1281 ntBASIC11.3□□□□□ -0.6
LINC01559Q495D7 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC11.3□□□□□ -0.6
LINC01559Q495D7 AC010230.1-201ENST00000514115 443 ntTSL 3 BASIC11.3□□□□□ -0.6
LINC01559Q495D7 ALG1L8P-201ENST00000533887 760 ntBASIC11.3□□□□□ -0.6
LINC01559Q495D7 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC11.3□□□□□ -0.6
LINC01559Q495D7 ATF7-204ENST00000548118 774 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
LINC01559Q495D7 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC11.3□□□□□ -0.6
LINC01559Q495D7 CAPN3-219ENST00000569136 1029 ntTSL 2 BASIC11.3□□□□□ -0.6
LINC01559Q495D7 ATF7-212ENST00000591397 860 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
LINC01559Q495D7 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC11.3□□□□□ -0.6
LINC01559Q495D7 AC092070.1-201ENST00000600257 359 ntTSL 3 BASIC11.3□□□□□ -0.6
LINC01559Q495D7 AP000654.1-201ENST00000602510 1192 ntTSL 5 BASIC11.3□□□□□ -0.6
LINC01559Q495D7 AC140113.2-201ENST00000604370 208 ntBASIC11.3□□□□□ -0.6
LINC01559Q495D7 AC018638.6-201ENST00000605007 1267 ntBASIC11.3□□□□□ -0.6
LINC01559Q495D7 AL354872.2-201ENST00000607679 466 ntBASIC11.3□□□□□ -0.6
LINC01559Q495D7 AP000322.3-201ENST00000608665 388 ntBASIC11.3□□□□□ -0.6
LINC01559Q495D7 AL133215.2-201ENST00000609242 977 ntBASIC11.3□□□□□ -0.6
LINC01559Q495D7 AC008833.1-201ENST00000611633 691 ntBASIC11.3□□□□□ -0.6
LINC01559Q495D7 AL512506.1-201ENST00000613918 449 ntBASIC11.3□□□□□ -0.6
LINC01559Q495D7 AP001885.1-201ENST00000621658 558 ntBASIC11.3□□□□□ -0.6
LINC01559Q495D7 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC11.3□□□□□ -0.6
LINC01559Q495D7 PTPN11-205ENST00000635625 1794 ntAPPRIS ALT1 TSL 5 BASIC11.3□□□□□ -0.6
LINC01559Q495D7 RIPOR3-202ENST00000327979 4377 ntAPPRIS P1 TSL 2 BASIC11.3□□□□□ -0.6
LINC01559Q495D7 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
LINC01559Q495D7 NOC2L-201ENST00000327044 2790 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
LINC01559Q495D7 PIGG-202ENST00000383028 2787 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
LINC01559Q495D7 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC11.3□□□□□ -0.6
LINC01559Q495D7 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
LINC01559Q495D7 LINC00704-201ENST00000430998 1478 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
LINC01559Q495D7 CYP2AB1P-202ENST00000454440 1456 ntBASIC11.3□□□□□ -0.6
LINC01559Q495D7 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
LINC01559Q495D7 CPSF1-212ENST00000616140 4494 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
LINC01559Q495D7 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
LINC01559Q495D7 SPATS2-203ENST00000547865 1810 ntTSL 2 BASIC11.3□□□□□ -0.6
LINC01559Q495D7 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
LINC01559Q495D7 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
LINC01559Q495D7 KIAA1217-203ENST00000376452 6052 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
LINC01559Q495D7 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
LINC01559Q495D7 AL354707.1-201ENST00000615168 2013 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
LINC01559Q495D7 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC11.3□□□□□ -0.6
LINC01559Q495D7 UGT3A2-201ENST00000282507 2355 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
LINC01559Q495D7 POLM-203ENST00000395831 2380 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
LINC01559Q495D7 HSD17B4-206ENST00000504811 2740 ntTSL 2 BASIC11.29□□□□□ -0.6
LINC01559Q495D7 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
LINC01559Q495D7 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
LINC01559Q495D7 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC11.29□□□□□ -0.6
LINC01559Q495D7 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
LINC01559Q495D7 AMACR-203ENST00000382072 2919 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
LINC01559Q495D7 KCNH6-202ENST00000456941 2928 ntTSL 5 BASIC11.29□□□□□ -0.6
LINC01559Q495D7 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
LINC01559Q495D7 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
LINC01559Q495D7 AC011474.4-201ENST00000623523 2076 ntBASIC11.29□□□□□ -0.6
LINC01559Q495D7 ZNF664-204ENST00000538932 4321 ntAPPRIS P1 TSL 3 BASIC11.29□□□□□ -0.6
LINC01559Q495D7 FANCG-201ENST00000378643 2631 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
LINC01559Q495D7 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
LINC01559Q495D7 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC11.29□□□□□ -0.6
LINC01559Q495D7 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC11.29□□□□□ -0.6
LINC01559Q495D7 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
LINC01559Q495D7 WDR27-201ENST00000423258 2465 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
LINC01559Q495D7 GRB2-203ENST00000392562 3729 ntAPPRIS P1 TSL 2 BASIC11.29□□□□□ -0.6
LINC01559Q495D7 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
LINC01559Q495D7 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
LINC01559Q495D7 RNF183-206ENST00000478815 2312 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
LINC01559Q495D7 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC11.29□□□□□ -0.6
LINC01559Q495D7 AMER2-201ENST00000357816 10055 ntTSL 2 BASIC11.29□□□□□ -0.6
LINC01559Q495D7 SIGLEC16-202ENST00000602139 2510 ntTSL 5 BASIC11.29□□□□□ -0.6
LINC01559Q495D7 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
LINC01559Q495D7 COL22A1-201ENST00000303045 6346 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Retrieved 100 of 98,524 protein–RNA pairs in 44.1 ms