Protein–RNA interactions for Protein: Q2MKA7

RSPO1, R-spondin-1, humanhuman

Predicted RBP Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO1Q2MKA7 GEMIN4-202ENST00000437269 1182 ntTSL 2 BASIC12.57□□□□□ -0.4
RSPO1Q2MKA7 BNIP3P42-201ENST00000454982 569 ntBASIC12.57□□□□□ -0.4
RSPO1Q2MKA7 CCDC153-204ENST00000503566 1295 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
RSPO1Q2MKA7 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
RSPO1Q2MKA7 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
RSPO1Q2MKA7 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC12.57□□□□□ -0.4
RSPO1Q2MKA7 FAM167A-AS1-202ENST00000533578 1222 ntTSL 2 BASIC12.57□□□□□ -0.4
RSPO1Q2MKA7 AL583810.1-201ENST00000553344 1045 ntBASIC12.57□□□□□ -0.4
RSPO1Q2MKA7 AC005730.2-201ENST00000564549 1184 ntBASIC12.57□□□□□ -0.4
RSPO1Q2MKA7 GFER-204ENST00000567719 483 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
RSPO1Q2MKA7 AP005264.1-201ENST00000586226 733 ntTSL 3 BASIC12.57□□□□□ -0.4
RSPO1Q2MKA7 BNIP3P29-201ENST00000598302 571 ntBASIC12.57□□□□□ -0.4
RSPO1Q2MKA7 ZNF586-206ENST00000599802 581 ntTSL 3 BASIC12.57□□□□□ -0.4
RSPO1Q2MKA7 KLK11-210ENST00000600362 759 ntTSL 3 BASIC12.57□□□□□ -0.4
RSPO1Q2MKA7 AC017083.2-201ENST00000608069 979 ntBASIC12.57□□□□□ -0.4
RSPO1Q2MKA7 AC011447.5-201ENST00000616168 564 ntBASIC12.57□□□□□ -0.4
RSPO1Q2MKA7 FCRL6-201ENST00000321935 1997 ntAPPRIS ALT2 TSL 2 BASIC12.57□□□□□ -0.4
RSPO1Q2MKA7 HIST2H2BF-201ENST00000369167 1954 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
RSPO1Q2MKA7 DDN-201ENST00000421952 3749 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
RSPO1Q2MKA7 PLA1A-204ENST00000488919 1456 ntTSL 2 BASIC12.57□□□□□ -0.4
RSPO1Q2MKA7 AP4M1-201ENST00000359593 1817 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
RSPO1Q2MKA7 MRC2-202ENST00000446119 3201 ntTSL 2 BASIC12.57□□□□□ -0.4
RSPO1Q2MKA7 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC12.57□□□□□ -0.4
RSPO1Q2MKA7 GPAT2-202ENST00000434632 3061 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
RSPO1Q2MKA7 AC104581.4-201ENST00000623126 3052 ntBASIC12.57□□□□□ -0.4
RSPO1Q2MKA7 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
RSPO1Q2MKA7 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
RSPO1Q2MKA7 ADORA2A-AS1-201ENST00000326341 2557 ntTSL 5 BASIC12.57□□□□□ -0.4
RSPO1Q2MKA7 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
RSPO1Q2MKA7 UBE2A-202ENST00000371558 1874 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
RSPO1Q2MKA7 ICA1-207ENST00000406470 2440 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
RSPO1Q2MKA7 CACNA2D1-201ENST00000356253 3858 ntTSL 5 BASIC12.57□□□□□ -0.4
RSPO1Q2MKA7 SLC1A7-202ENST00000371494 2637 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
RSPO1Q2MKA7 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
RSPO1Q2MKA7 ZNF174-201ENST00000268655 2260 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
RSPO1Q2MKA7 MCRS1-201ENST00000343810 1928 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
RSPO1Q2MKA7 MAPT-IT1-201ENST00000624111 3016 ntBASIC12.56□□□□□ -0.4
RSPO1Q2MKA7 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
RSPO1Q2MKA7 MLXIPL-204ENST00000414749 3224 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
RSPO1Q2MKA7 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
RSPO1Q2MKA7 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
RSPO1Q2MKA7 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
RSPO1Q2MKA7 AC063926.3-201ENST00000624734 5658 ntBASIC12.56□□□□□ -0.4
RSPO1Q2MKA7 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
RSPO1Q2MKA7 SP8-203ENST00000617581 3496 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
RSPO1Q2MKA7 DPYSL4-201ENST00000338492 2729 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
RSPO1Q2MKA7 BORCS8-202ENST00000462790 1429 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
RSPO1Q2MKA7 FAM213A-203ENST00000372187 1647 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
RSPO1Q2MKA7 LRRFIP1-203ENST00000308482 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
RSPO1Q2MKA7 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
RSPO1Q2MKA7 TJP2-208ENST00000535702 3984 ntAPPRIS ALT2 TSL 2 BASIC12.56□□□□□ -0.4
RSPO1Q2MKA7 PPM1M-201ENST00000296487 2429 ntTSL 2 BASIC12.56□□□□□ -0.4
RSPO1Q2MKA7 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC12.56□□□□□ -0.4
RSPO1Q2MKA7 KIFC3-204ENST00000465878 3225 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
RSPO1Q2MKA7 SHROOM1-208ENST00000617339 3638 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
RSPO1Q2MKA7 OCEL1-201ENST00000215061 1133 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
RSPO1Q2MKA7 RPL35-201ENST00000348462 455 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
RSPO1Q2MKA7 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC12.56□□□□□ -0.4
RSPO1Q2MKA7 MDP1-202ENST00000396833 582 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
RSPO1Q2MKA7 ROPN1-202ENST00000405845 1007 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
RSPO1Q2MKA7 VDAC1P1-201ENST00000439229 848 ntBASIC12.56□□□□□ -0.4
RSPO1Q2MKA7 GOLGA2P4-201ENST00000441462 777 ntBASIC12.56□□□□□ -0.4
RSPO1Q2MKA7 USE1-202ENST00000445667 795 ntAPPRIS ALT1 TSL 5 BASIC12.56□□□□□ -0.4
RSPO1Q2MKA7 ZNF789-204ENST00000448667 1055 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
RSPO1Q2MKA7 RPL35A-205ENST00000448864 549 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
RSPO1Q2MKA7 HYAL3-206ENST00000513170 636 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
RSPO1Q2MKA7 AC106772.2-201ENST00000515085 442 ntTSL 3 BASIC12.56□□□□□ -0.4
RSPO1Q2MKA7 IGHV3-71-201ENST00000523324 359 ntBASIC12.56□□□□□ -0.4
RSPO1Q2MKA7 SNHG9-201ENST00000531523 275 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
RSPO1Q2MKA7 ZNF385A-213ENST00000551771 1111 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
RSPO1Q2MKA7 AC124068.2-202ENST00000562356 612 ntTSL 3 BASIC12.56□□□□□ -0.4
RSPO1Q2MKA7 AC007342.4-201ENST00000566383 584 ntTSL 4 BASIC12.56□□□□□ -0.4
RSPO1Q2MKA7 AL445483.1-201ENST00000568695 736 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
RSPO1Q2MKA7 AC124068.2-201ENST00000569473 1109 ntBASIC12.56□□□□□ -0.4
RSPO1Q2MKA7 AC099684.2-201ENST00000574520 870 ntTSL 5 BASIC12.56□□□□□ -0.4
RSPO1Q2MKA7 IFT20-216ENST00000588477 774 ntTSL 5 BASIC12.56□□□□□ -0.4
RSPO1Q2MKA7 KLK3-211ENST00000597483 810 ntTSL 2 BASIC12.56□□□□□ -0.4
RSPO1Q2MKA7 AC010328.2-201ENST00000597698 1111 ntBASIC12.56□□□□□ -0.4
RSPO1Q2MKA7 MUC1-226ENST00000614519 1093 ntTSL 2 BASIC12.56□□□□□ -0.4
RSPO1Q2MKA7 MIR6805-201ENST00000615055 62 ntBASIC12.56□□□□□ -0.4
RSPO1Q2MKA7 BAP1-211ENST00000615113 489 ntBASIC12.56□□□□□ -0.4
RSPO1Q2MKA7 RPL35-206ENST00000629845 340 ntTSL 5 BASIC12.56□□□□□ -0.4
RSPO1Q2MKA7 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
RSPO1Q2MKA7 LAP3P2-201ENST00000454686 1454 ntBASIC12.56□□□□□ -0.4
RSPO1Q2MKA7 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
RSPO1Q2MKA7 USP44-203ENST00000537435 2499 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
RSPO1Q2MKA7 ARVCF-203ENST00000406259 2871 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
RSPO1Q2MKA7 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
RSPO1Q2MKA7 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
RSPO1Q2MKA7 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
RSPO1Q2MKA7 ZBTB17-202ENST00000375743 2745 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
RSPO1Q2MKA7 PHYHD1-203ENST00000372592 2133 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
RSPO1Q2MKA7 CRLS1-201ENST00000378863 3958 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
RSPO1Q2MKA7 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC12.56□□□□□ -0.4
RSPO1Q2MKA7 L3MBTL1-206ENST00000427442 3157 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
RSPO1Q2MKA7 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
RSPO1Q2MKA7 GPRC5B-209ENST00000569479 2984 ntAPPRIS P2 TSL 5 BASIC12.56□□□□□ -0.4
RSPO1Q2MKA7 AC011462.1-202ENST00000540732 1960 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
RSPO1Q2MKA7 LINC02486-201ENST00000604157 3000 ntBASIC12.56□□□□□ -0.4
RSPO1Q2MKA7 TTC39A-216ENST00000530004 1780 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 57.4 ms