Protein–RNA interactions for Protein: Q08722

CD47, Leukocyte surface antigen CD47, humanhuman

Predictions only

Length 323 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD47Q08722 COL4A3-202ENST00000396578 8097 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CD47Q08722 CCSER2-203ENST00000372088 7657 ntTSL 2 BASIC13.64□□□□□ -0.23
CD47Q08722 DHTKD1-201ENST00000263035 5159 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CD47Q08722 ARID4B-201ENST00000264183 4995 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CD47Q08722 NTM-202ENST00000374786 3190 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CD47Q08722 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC13.64□□□□□ -0.23
CD47Q08722 AL157996.1-201ENST00000624684 2299 ntBASIC13.64□□□□□ -0.23
CD47Q08722 RBBP4-204ENST00000414241 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CD47Q08722 TMEM87A-201ENST00000307216 1598 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
CD47Q08722 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CD47Q08722 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CD47Q08722 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
CD47Q08722 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
CD47Q08722 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
CD47Q08722 SUN1-204ENST00000403868 978 ntTSL 2 BASIC13.64□□□□□ -0.23
CD47Q08722 MEP1AP4-201ENST00000423244 1087 ntBASIC13.64□□□□□ -0.23
CD47Q08722 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC13.64□□□□□ -0.23
CD47Q08722 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC13.64□□□□□ -0.23
CD47Q08722 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC13.64□□□□□ -0.23
CD47Q08722 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC13.64□□□□□ -0.23
CD47Q08722 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC13.64□□□□□ -0.23
CD47Q08722 RPL13AP25-201ENST00000484130 612 ntBASIC13.64□□□□□ -0.23
CD47Q08722 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CD47Q08722 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
CD47Q08722 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC13.64□□□□□ -0.23
CD47Q08722 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC13.64□□□□□ -0.23
CD47Q08722 STRADA-221ENST00000582137 1238 ntTSL 2 BASIC13.64□□□□□ -0.23
CD47Q08722 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CD47Q08722 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
CD47Q08722 AL391069.4-201ENST00000609583 481 ntBASIC13.64□□□□□ -0.23
CD47Q08722 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC13.64□□□□□ -0.23
CD47Q08722 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC13.64□□□□□ -0.23
CD47Q08722 TRDMT1-203ENST00000377799 3527 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CD47Q08722 PLCD4-202ENST00000417849 2738 ntAPPRIS P2 TSL 5 BASIC13.64□□□□□ -0.23
CD47Q08722 TNIP3-201ENST00000057513 2416 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
CD47Q08722 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CD47Q08722 HSP90AA1-201ENST00000216281 3379 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CD47Q08722 AC011498.7-201ENST00000624986 2027 ntBASIC13.64□□□□□ -0.23
CD47Q08722 RNF167-201ENST00000262482 1915 ntAPPRIS P3 TSL 2 BASIC13.64□□□□□ -0.23
CD47Q08722 PATL2-207ENST00000560775 1913 ntAPPRIS P3 TSL 5 BASIC13.64□□□□□ -0.23
CD47Q08722 SLC13A5-202ENST00000381074 1738 ntTSL 2 BASIC13.64□□□□□ -0.23
CD47Q08722 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CD47Q08722 DDX31-204ENST00000372159 4577 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
CD47Q08722 SMAGP-203ENST00000603798 2350 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CD47Q08722 SLC4A8-205ENST00000535225 2262 ntTSL 2 BASIC13.64□□□□□ -0.23
CD47Q08722 SLC4A7-211ENST00000445684 4061 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
CD47Q08722 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
CD47Q08722 SPOCK3-218ENST00000511531 2908 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
CD47Q08722 LINC02135-201ENST00000599486 2065 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
CD47Q08722 C1QTNF1-204ENST00000392445 2833 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
CD47Q08722 DDC-AS1-201ENST00000454521 1776 ntTSL 2 BASIC13.63□□□□□ -0.23
CD47Q08722 SEPT7-202ENST00000399034 4399 ntTSL 5 BASIC13.63□□□□□ -0.23
CD47Q08722 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CD47Q08722 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
CD47Q08722 GP6-202ENST00000333884 2210 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
CD47Q08722 CREB3L4-204ENST00000368603 1557 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
CD47Q08722 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC13.63□□□□□ -0.23
CD47Q08722 TMEM123-201ENST00000361236 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
CD47Q08722 NOP58-201ENST00000264279 2046 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CD47Q08722 TRIT1-214ENST00000537440 2026 ntTSL 5 BASIC13.63□□□□□ -0.23
CD47Q08722 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC13.63□□□□□ -0.23
CD47Q08722 WASHC5-202ENST00000517845 3667 ntTSL 2 BASIC13.63□□□□□ -0.23
CD47Q08722 TP73-207ENST00000378290 1831 ntTSL 2 BASIC13.63□□□□□ -0.23
CD47Q08722 PAF1-204ENST00000595564 1810 ntAPPRIS ALT2 TSL 2 BASIC13.63□□□□□ -0.23
CD47Q08722 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
CD47Q08722 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CD47Q08722 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
CD47Q08722 Z82198.1-201ENST00000447396 437 ntTSL 3 BASIC13.63□□□□□ -0.23
CD47Q08722 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC13.63□□□□□ -0.23
CD47Q08722 RN7SL399P-201ENST00000471648 279 ntBASIC13.63□□□□□ -0.23
CD47Q08722 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
CD47Q08722 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC13.63□□□□□ -0.23
CD47Q08722 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC13.63□□□□□ -0.23
CD47Q08722 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC13.63□□□□□ -0.23
CD47Q08722 BCAT2-203ENST00000545387 1272 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
CD47Q08722 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC13.63□□□□□ -0.23
CD47Q08722 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC13.63□□□□□ -0.23
CD47Q08722 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
CD47Q08722 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC13.63□□□□□ -0.23
CD47Q08722 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC13.63□□□□□ -0.23
CD47Q08722 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
CD47Q08722 AC107373.2-201ENST00000607735 490 ntBASIC13.63□□□□□ -0.23
CD47Q08722 AC004790.1-201ENST00000612686 536 ntBASIC13.63□□□□□ -0.23
CD47Q08722 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CD47Q08722 SYDE1-201ENST00000342784 3264 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
CD47Q08722 SREBF1-202ENST00000355815 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
CD47Q08722 ADAR-202ENST00000368474 6625 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
CD47Q08722 RAPGEF3-205ENST00000449771 6061 ntAPPRIS ALT2 TSL 2 BASIC13.63□□□□□ -0.23
CD47Q08722 MKS1-201ENST00000313863 2091 ntTSL 5 BASIC13.63□□□□□ -0.23
CD47Q08722 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
CD47Q08722 PCDHGA6-202ENST00000610583 5650 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
CD47Q08722 COL6A1-201ENST00000361866 4238 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
CD47Q08722 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
CD47Q08722 CCDC126-202ENST00000409765 2324 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CD47Q08722 OSBPL8-201ENST00000261183 7239 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
CD47Q08722 OSBPL8-218ENST00000611266 7239 ntAPPRIS ALT1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CD47Q08722 MSRB3-202ENST00000355192 4289 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
CD47Q08722 KCNH6-204ENST00000581784 3017 ntTSL 2 BASIC13.63□□□□□ -0.23
CD47Q08722 FAM122C-203ENST00000414371 2119 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
CD47Q08722 TSPEAR-AS1-202ENST00000451035 2108 ntTSL 5 BASIC13.63□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 46.5 ms