Protein–RNA interactions for Protein: Q04837

SSBP1, Single-stranded DNA-binding protein, mitochondrial, humanhuman

Known RBP Predictions only

Length 148 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1Q04837 SREBF1-202ENST00000355815 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
SSBP1Q04837 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
SSBP1Q04837 VWA8-201ENST00000281496 3475 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
SSBP1Q04837 DAZL-201ENST00000250863 3104 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
SSBP1Q04837 ATN1-201ENST00000356654 4351 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
SSBP1Q04837 AGRN-201ENST00000379370 7323 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
SSBP1Q04837 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
SSBP1Q04837 PGBD2-202ENST00000355360 2879 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
SSBP1Q04837 SLC22A23-202ENST00000380302 2883 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
SSBP1Q04837 ZNF772-204ENST00000427512 5130 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
SSBP1Q04837 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
SSBP1Q04837 NAA60-203ENST00000414063 2619 ntAPPRIS P1 TSL 2 BASIC12.38□□□□□ -0.43
SSBP1Q04837 SLC8A2-203ENST00000542837 3603 ntTSL 2 BASIC12.38□□□□□ -0.43
SSBP1Q04837 PLCD4-202ENST00000417849 2738 ntAPPRIS P2 TSL 5 BASIC12.38□□□□□ -0.43
SSBP1Q04837 SYNE3-201ENST00000334258 3275 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
SSBP1Q04837 CD300LB-202ENST00000392621 2286 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
SSBP1Q04837 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
SSBP1Q04837 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
SSBP1Q04837 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
SSBP1Q04837 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC12.38□□□□□ -0.43
SSBP1Q04837 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC12.38□□□□□ -0.43
SSBP1Q04837 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC12.38□□□□□ -0.43
SSBP1Q04837 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC12.38□□□□□ -0.43
SSBP1Q04837 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC12.38□□□□□ -0.43
SSBP1Q04837 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
SSBP1Q04837 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC12.38□□□□□ -0.43
SSBP1Q04837 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC12.38□□□□□ -0.43
SSBP1Q04837 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC12.38□□□□□ -0.43
SSBP1Q04837 ZNF800-203ENST00000393313 4358 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
SSBP1Q04837 C1QTNF9-201ENST00000332018 1830 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
SSBP1Q04837 C15orf59-204ENST00000569673 6573 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
SSBP1Q04837 CAMKV-201ENST00000296471 2913 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
SSBP1Q04837 PLPPR1-201ENST00000374874 2495 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
SSBP1Q04837 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
SSBP1Q04837 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
SSBP1Q04837 SLC22A2-202ENST00000366953 2597 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
SSBP1Q04837 AL022313.4-201ENST00000562756 2046 ntBASIC12.38□□□□□ -0.43
SSBP1Q04837 CABLES2-201ENST00000279101 3785 ntAPPRIS P2 TSL 5 BASIC12.38□□□□□ -0.43
SSBP1Q04837 USP51-201ENST00000500968 4407 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
SSBP1Q04837 CHD5-201ENST00000262450 9646 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
SSBP1Q04837 PDK2-203ENST00000503176 3440 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
SSBP1Q04837 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
SSBP1Q04837 FUT6-205ENST00000527106 2211 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
SSBP1Q04837 LINC00887-202ENST00000414120 2880 ntTSL 3 BASIC12.38□□□□□ -0.43
SSBP1Q04837 PDE1C-205ENST00000396191 2952 ntAPPRIS ALT1 TSL 2 BASIC12.38□□□□□ -0.43
SSBP1Q04837 COL22A1-201ENST00000303045 6346 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
SSBP1Q04837 HOXC4-202ENST00000430889 1666 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
SSBP1Q04837 DYRK1B-202ENST00000348817 2448 ntTSL 5 BASIC12.38□□□□□ -0.43
SSBP1Q04837 Z82170.1-201ENST00000625081 3192 ntBASIC12.38□□□□□ -0.43
SSBP1Q04837 NTN4-203ENST00000538383 1971 ntTSL 2 BASIC12.38□□□□□ -0.43
SSBP1Q04837 FNTB-201ENST00000246166 2834 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
SSBP1Q04837 PRC1-204ENST00000442656 2060 ntTSL 2 BASIC12.38□□□□□ -0.43
SSBP1Q04837 KCNV1-201ENST00000297404 2927 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
SSBP1Q04837 USP19-208ENST00000453664 4719 ntAPPRIS ALT2 TSL 2 BASIC12.37□□□□□ -0.43
SSBP1Q04837 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
SSBP1Q04837 TCHH-201ENST00000368804 6900 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
SSBP1Q04837 CCND3-215ENST00000511642 2394 ntTSL 2 BASIC12.37□□□□□ -0.43
SSBP1Q04837 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
SSBP1Q04837 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
SSBP1Q04837 LINC01165-201ENST00000445190 1623 ntBASIC12.37□□□□□ -0.43
SSBP1Q04837 ZNF263-202ENST00000538765 1721 ntTSL 2 BASIC12.37□□□□□ -0.43
SSBP1Q04837 AP1B1-208ENST00000432560 4146 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
SSBP1Q04837 LRRC17-201ENST00000249377 2002 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
SSBP1Q04837 GCM2-201ENST00000379491 2441 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
SSBP1Q04837 POLM-201ENST00000242248 2631 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
SSBP1Q04837 EHD4-201ENST00000220325 6416 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
SSBP1Q04837 MTG2-201ENST00000370823 2929 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
SSBP1Q04837 AGBL2-205ENST00000528244 2929 ntAPPRIS ALT2 TSL 2 BASIC12.37□□□□□ -0.43
SSBP1Q04837 DISC1-222ENST00000622252 6927 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
SSBP1Q04837 THSD4-201ENST00000261862 3133 ntTSL 5 BASIC12.37□□□□□ -0.43
SSBP1Q04837 ELN-209ENST00000380576 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
SSBP1Q04837 CHMP7-202ENST00000397677 3403 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
SSBP1Q04837 SCAMP5-202ENST00000425597 3411 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
SSBP1Q04837 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
SSBP1Q04837 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC12.37□□□□□ -0.43
SSBP1Q04837 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
SSBP1Q04837 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC12.37□□□□□ -0.43
SSBP1Q04837 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC12.37□□□□□ -0.43
SSBP1Q04837 AC004461.1-201ENST00000412461 403 ntBASIC12.37□□□□□ -0.43
SSBP1Q04837 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC12.37□□□□□ -0.43
SSBP1Q04837 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
SSBP1Q04837 AL161932.2-201ENST00000435436 679 ntBASIC12.37□□□□□ -0.43
SSBP1Q04837 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC12.37□□□□□ -0.43
SSBP1Q04837 ALG3P1-201ENST00000508806 1114 ntBASIC12.37□□□□□ -0.43
SSBP1Q04837 AP000344.2-201ENST00000512987 629 ntBASIC12.37□□□□□ -0.43
SSBP1Q04837 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC12.37□□□□□ -0.43
SSBP1Q04837 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC12.37□□□□□ -0.43
SSBP1Q04837 AL512356.2-201ENST00000546955 174 ntBASIC12.37□□□□□ -0.43
SSBP1Q04837 AC027237.1-201ENST00000560942 655 ntBASIC12.37□□□□□ -0.43
SSBP1Q04837 AC005586.2-201ENST00000563946 837 ntBASIC12.37□□□□□ -0.43
SSBP1Q04837 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC12.37□□□□□ -0.43
SSBP1Q04837 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC12.37□□□□□ -0.43
SSBP1Q04837 BX088702.1-201ENST00000610784 235 ntBASIC12.37□□□□□ -0.43
SSBP1Q04837 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC12.37□□□□□ -0.43
SSBP1Q04837 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC12.37□□□□□ -0.43
SSBP1Q04837 RAB34-223ENST00000636154 730 ntTSL 2 BASIC12.37□□□□□ -0.43
SSBP1Q04837 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
SSBP1Q04837 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
SSBP1Q04837 RHD-209ENST00000568195 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
SSBP1Q04837 CAPN14-202ENST00000403897 2197 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 45.7 ms