Protein–RNA interactions for Protein: Q01581

HMGCS1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1Q01581 AC132938.4-201ENST00000623835 848 ntBASIC14.12□□□□□ -0.15
HMGCS1Q01581 AC024941.2-201ENST00000625763 493 ntTSL 2 BASIC14.12□□□□□ -0.15
HMGCS1Q01581 PCDHGB7-201ENST00000398594 4765 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
HMGCS1Q01581 SIRPA-202ENST00000358771 3996 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
HMGCS1Q01581 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC14.12□□□□□ -0.15
HMGCS1Q01581 PHTF1-203ENST00000369600 3075 ntTSL 5 BASIC14.12□□□□□ -0.15
HMGCS1Q01581 HNRNPH1-201ENST00000329433 2114 ntTSL 2 BASIC14.12□□□□□ -0.15
HMGCS1Q01581 PHYHD1-203ENST00000372592 2133 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
HMGCS1Q01581 SLC6A12-207ENST00000536824 2101 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
HMGCS1Q01581 AGO3-201ENST00000246314 3211 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
HMGCS1Q01581 PSIP1-204ENST00000380738 3364 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
HMGCS1Q01581 SMAD2-212ENST00000591214 1714 ntTSL 2 BASIC14.12□□□□□ -0.15
HMGCS1Q01581 RPS6KC1-201ENST00000366959 5454 ntAPPRIS ALT1 TSL 2 BASIC14.12□□□□□ -0.15
HMGCS1Q01581 RPS6KC1-202ENST00000366960 5490 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
HMGCS1Q01581 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
HMGCS1Q01581 CEP70-201ENST00000264982 2732 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
HMGCS1Q01581 XPR1-201ENST00000367589 4126 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
HMGCS1Q01581 PHF14-201ENST00000403050 4276 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
HMGCS1Q01581 SRSF2-203ENST00000392485 2885 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
HMGCS1Q01581 SWAP70-201ENST00000318950 4882 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
HMGCS1Q01581 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
HMGCS1Q01581 TMEM184B-202ENST00000361906 3611 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
HMGCS1Q01581 ELP4-201ENST00000350638 1907 ntAPPRIS ALT1 TSL 5 BASIC14.11□□□□□ -0.15
HMGCS1Q01581 MFAP4-202ENST00000395592 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
HMGCS1Q01581 OSBPL3-201ENST00000313367 6760 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
HMGCS1Q01581 PTPN9-206ENST00000618819 7813 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
HMGCS1Q01581 ECE1-201ENST00000264205 2381 ntAPPRIS P4 TSL 1 (best) BASIC14.11□□□□□ -0.15
HMGCS1Q01581 MAD1L1-204ENST00000406869 2991 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
HMGCS1Q01581 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
HMGCS1Q01581 GAP43-201ENST00000305124 1691 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
HMGCS1Q01581 ADAMTS10-201ENST00000270328 4194 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
HMGCS1Q01581 HIF3A-202ENST00000244303 2250 ntTSL 2 BASIC14.11□□□□□ -0.15
HMGCS1Q01581 ELN-208ENST00000380575 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
HMGCS1Q01581 MAPT-IT1-201ENST00000624111 3016 ntBASIC14.11□□□□□ -0.15
HMGCS1Q01581 ARHGEF1-201ENST00000337665 3171 ntAPPRIS P4 TSL 1 (best) BASIC14.11□□□□□ -0.15
HMGCS1Q01581 NTN4-201ENST00000343702 3615 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
HMGCS1Q01581 PRKAB1-201ENST00000229328 2610 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
HMGCS1Q01581 PDZK1IP1-201ENST00000294338 846 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
HMGCS1Q01581 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
HMGCS1Q01581 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
HMGCS1Q01581 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
HMGCS1Q01581 ZFYVE27-202ENST00000357540 2765 ntTSL 2 BASIC14.11□□□□□ -0.15
HMGCS1Q01581 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC14.11□□□□□ -0.15
HMGCS1Q01581 ZFYVE27-204ENST00000370610 2769 ntTSL 2 BASIC14.11□□□□□ -0.15
HMGCS1Q01581 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
HMGCS1Q01581 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
HMGCS1Q01581 AC092933.1-201ENST00000393644 945 ntBASIC14.11□□□□□ -0.15
HMGCS1Q01581 AGFG1-204ENST00000409315 2912 ntTSL 5 BASIC14.11□□□□□ -0.15
HMGCS1Q01581 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC14.11□□□□□ -0.15
HMGCS1Q01581 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC14.11□□□□□ -0.15
HMGCS1Q01581 AC007389.4-201ENST00000454674 793 ntBASIC14.11□□□□□ -0.15
HMGCS1Q01581 INE1-201ENST00000456273 945 ntBASIC14.11□□□□□ -0.15
HMGCS1Q01581 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
HMGCS1Q01581 HIF3A-206ENST00000472815 1709 ntTSL 2 BASIC14.11□□□□□ -0.15
HMGCS1Q01581 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC14.11□□□□□ -0.15
HMGCS1Q01581 SLC25A47P1-201ENST00000531577 414 ntBASIC14.11□□□□□ -0.15
HMGCS1Q01581 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC14.11□□□□□ -0.15
HMGCS1Q01581 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC14.11□□□□□ -0.15
HMGCS1Q01581 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC14.11□□□□□ -0.15
HMGCS1Q01581 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC14.11□□□□□ -0.15
HMGCS1Q01581 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC14.11□□□□□ -0.15
HMGCS1Q01581 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
HMGCS1Q01581 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
HMGCS1Q01581 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC14.11□□□□□ -0.15
HMGCS1Q01581 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC14.11□□□□□ -0.15
HMGCS1Q01581 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
HMGCS1Q01581 TRIM71-201ENST00000383763 8685 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
HMGCS1Q01581 CCDC186-202ENST00000369286 1928 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
HMGCS1Q01581 NFYC-215ENST00000456393 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC14.11□□□□□ -0.15
HMGCS1Q01581 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
HMGCS1Q01581 ASAH1-258ENST00000637790 3042 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
HMGCS1Q01581 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC14.11□□□□□ -0.15
HMGCS1Q01581 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC14.11□□□□□ -0.15
HMGCS1Q01581 PODN-207ENST00000618387 3065 ntAPPRIS ALT2 TSL 2 BASIC14.11□□□□□ -0.15
HMGCS1Q01581 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
HMGCS1Q01581 GORASP1-201ENST00000319283 3722 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
HMGCS1Q01581 ANGPTL2-202ENST00000373425 3707 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
HMGCS1Q01581 GPN1-201ENST00000264718 2496 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
HMGCS1Q01581 PLPPR1-201ENST00000374874 2495 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
HMGCS1Q01581 AC130686.1-201ENST00000622936 2466 ntBASIC14.1□□□□□ -0.15
HMGCS1Q01581 SORCS1-201ENST00000263054 7272 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
HMGCS1Q01581 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
HMGCS1Q01581 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
HMGCS1Q01581 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
HMGCS1Q01581 MINDY4-201ENST00000265299 2733 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
HMGCS1Q01581 VPS9D1-201ENST00000389386 2748 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
HMGCS1Q01581 ZBTB2-201ENST00000325144 3090 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
HMGCS1Q01581 AC090826.2-201ENST00000568496 4946 ntTSL 2 BASIC14.1□□□□□ -0.15
HMGCS1Q01581 NEDD4L-238ENST00000635997 4402 ntTSL 5 BASIC14.1□□□□□ -0.15
HMGCS1Q01581 SCAMP5-202ENST00000425597 3411 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
HMGCS1Q01581 IMPDH1-204ENST00000419067 2431 ntTSL 3 BASIC14.1□□□□□ -0.15
HMGCS1Q01581 ARHGAP23P1-201ENST00000562773 1937 ntBASIC14.1□□□□□ -0.15
HMGCS1Q01581 RASGEF1A-202ENST00000374459 3264 ntAPPRIS ALT2 TSL 2 BASIC14.1□□□□□ -0.15
HMGCS1Q01581 FBXO21-202ENST00000427718 4138 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
HMGCS1Q01581 ANGPTL8-201ENST00000252453 872 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
HMGCS1Q01581 WDR54-201ENST00000348227 1147 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
HMGCS1Q01581 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
HMGCS1Q01581 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC14.1□□□□□ -0.15
HMGCS1Q01581 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
HMGCS1Q01581 AC005229.1-201ENST00000392885 409 ntBASIC14.1□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 40.8 ms