Protein–RNA interactions for Protein: Q00526

CDK3, Cyclin-dependent kinase 3, humanhuman

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK3Q00526 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CDK3Q00526 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CDK3Q00526 RABEPK-201ENST00000259460 1313 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CDK3Q00526 AC064801.2-201ENST00000625052 1303 ntBASIC14.31□□□□□ -0.12
CDK3Q00526 RASGEF1B-202ENST00000335927 1756 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CDK3Q00526 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.12
CDK3Q00526 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC14.31□□□□□ -0.12
CDK3Q00526 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CDK3Q00526 UBL7-201ENST00000361351 1360 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
CDK3Q00526 LINC00334-203ENST00000638500 1377 ntTSL 5 BASIC14.31□□□□□ -0.12
CDK3Q00526 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
CDK3Q00526 ENO3-202ENST00000518175 1448 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CDK3Q00526 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CDK3Q00526 LINC00905-203ENST00000588838 1414 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CDK3Q00526 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
CDK3Q00526 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
CDK3Q00526 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CDK3Q00526 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CDK3Q00526 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC14.3□□□□□ -0.12
CDK3Q00526 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC14.3□□□□□ -0.12
CDK3Q00526 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
CDK3Q00526 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CDK3Q00526 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
CDK3Q00526 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CDK3Q00526 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CDK3Q00526 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CDK3Q00526 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CDK3Q00526 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CDK3Q00526 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC14.3□□□□□ -0.12
CDK3Q00526 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC14.3□□□□□ -0.12
CDK3Q00526 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CDK3Q00526 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CDK3Q00526 NPFF-201ENST00000267017 592 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CDK3Q00526 RPP25L-202ENST00000378959 888 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CDK3Q00526 KNCN-202ENST00000396314 608 ntAPPRIS P3 TSL 4 BASIC14.3□□□□□ -0.12
CDK3Q00526 AL353637.1-201ENST00000451571 732 ntBASIC14.3□□□□□ -0.12
CDK3Q00526 RN7SL720P-201ENST00000488178 304 ntBASIC14.3□□□□□ -0.12
CDK3Q00526 IMP3P2-201ENST00000489760 475 ntBASIC14.3□□□□□ -0.12
CDK3Q00526 SUPT4H1P2-201ENST00000501248 353 ntBASIC14.3□□□□□ -0.12
CDK3Q00526 AC104561.3-201ENST00000518590 715 ntTSL 5 BASIC14.3□□□□□ -0.12
CDK3Q00526 AC025259.3-202ENST00000564363 687 ntTSL 2 BASIC14.3□□□□□ -0.12
CDK3Q00526 FGFR3P5-201ENST00000564496 886 ntBASIC14.3□□□□□ -0.12
CDK3Q00526 AP005264.1-201ENST00000586226 733 ntTSL 3 BASIC14.3□□□□□ -0.12
CDK3Q00526 AC005901.1-201ENST00000592766 552 ntTSL 4 BASIC14.3□□□□□ -0.12
CDK3Q00526 AC020922.3-201ENST00000595064 547 ntBASIC14.3□□□□□ -0.12
CDK3Q00526 AF254983.2-201ENST00000612331 135 ntBASIC14.3□□□□□ -0.12
CDK3Q00526 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CDK3Q00526 FRMPD2B-201ENST00000431305 1347 ntBASIC14.3□□□□□ -0.12
CDK3Q00526 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
CDK3Q00526 MICAL3-206ENST00000441493 9445 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
CDK3Q00526 AC011498.7-201ENST00000624986 2027 ntBASIC14.3□□□□□ -0.12
CDK3Q00526 GSN-209ENST00000449733 2702 ntTSL 2 BASIC14.3□□□□□ -0.12
CDK3Q00526 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CDK3Q00526 TOB1-AS1-201ENST00000416263 1351 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CDK3Q00526 MAPK14-204ENST00000468133 1376 ntTSL 2 BASIC14.3□□□□□ -0.12
CDK3Q00526 LAP3P2-201ENST00000454686 1454 ntBASIC14.3□□□□□ -0.12
CDK3Q00526 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC14.3□□□□□ -0.12
CDK3Q00526 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC14.3□□□□□ -0.12
CDK3Q00526 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
CDK3Q00526 FP565260.2-201ENST00000623476 1599 ntAPPRIS P1 TSL 3 BASIC14.3□□□□□ -0.12
CDK3Q00526 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC14.3□□□□□ -0.12
CDK3Q00526 PORCN-204ENST00000361988 1672 ntAPPRIS ALT1 TSL 5 BASIC14.3□□□□□ -0.12
CDK3Q00526 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CDK3Q00526 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CDK3Q00526 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CDK3Q00526 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
CDK3Q00526 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
CDK3Q00526 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CDK3Q00526 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CDK3Q00526 AC082651.3-201ENST00000474667 1947 ntTSL 2 BASIC14.29□□□□□ -0.12
CDK3Q00526 STRADA-243ENST00000640086 1925 ntTSL 5 BASIC14.29□□□□□ -0.12
CDK3Q00526 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CDK3Q00526 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
CDK3Q00526 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC14.29□□□□□ -0.12
CDK3Q00526 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
CDK3Q00526 ODF2L-204ENST00000370566 2155 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
CDK3Q00526 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CDK3Q00526 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CDK3Q00526 COX4I1-201ENST00000253452 708 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CDK3Q00526 POLD4-201ENST00000312419 918 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CDK3Q00526 RNA5SP359-201ENST00000364838 113 ntBASIC14.29□□□□□ -0.12
CDK3Q00526 TMEM14B-202ENST00000379542 975 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CDK3Q00526 DMAC2-203ENST00000417807 1065 ntTSL 2 BASIC14.29□□□□□ -0.12
CDK3Q00526 AC007274.2-201ENST00000421675 662 ntBASIC14.29□□□□□ -0.12
CDK3Q00526 HVCN1-203ENST00000439744 1215 ntTSL 2 BASIC14.29□□□□□ -0.12
CDK3Q00526 BANF1-202ENST00000445560 946 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CDK3Q00526 PFN2-206ENST00000461930 606 ntTSL 4 BASIC14.29□□□□□ -0.12
CDK3Q00526 EEF1D-218ENST00000526838 926 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
CDK3Q00526 TP53AIP1-204ENST00000530777 363 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
CDK3Q00526 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CDK3Q00526 AC105129.2-201ENST00000559536 390 ntBASIC14.29□□□□□ -0.12
CDK3Q00526 NAT9-211ENST00000580632 799 ntTSL 3 BASIC14.29□□□□□ -0.12
CDK3Q00526 AC011825.3-201ENST00000583184 565 ntTSL 5 BASIC14.29□□□□□ -0.12
CDK3Q00526 FBXL12-212ENST00000592067 879 ntTSL 2 BASIC14.29□□□□□ -0.12
CDK3Q00526 IRF3-215ENST00000596822 823 ntTSL 3 BASIC14.29□□□□□ -0.12
CDK3Q00526 AC106872.11-201ENST00000605838 421 ntBASIC14.29□□□□□ -0.12
CDK3Q00526 MEG3_2.1-201ENST00000611456 105 ntBASIC14.29□□□□□ -0.12
CDK3Q00526 AL353770.1-201ENST00000614915 403 ntBASIC14.29□□□□□ -0.12
CDK3Q00526 AC090386.2-201ENST00000623010 1039 ntBASIC14.29□□□□□ -0.12
CDK3Q00526 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 87.2 ms