Protein–RNA interactions for Protein: P78413

IRX4, Iroquois-class homeodomain protein IRX-4, humanhuman

Predictions only

Length 519 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRX4P78413 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
IRX4P78413 ACTR2-205ENST00000542850 1429 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
IRX4P78413 SEMA3F-202ENST00000413852 3212 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
IRX4P78413 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
IRX4P78413 NCKIPSD-204ENST00000416649 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.05
IRX4P78413 TNIP1-214ENST00000522226 2238 ntAPPRIS P3 TSL 2 BASIC15.33■□□□□ 0.05
IRX4P78413 ABCG1-205ENST00000398449 2998 ntAPPRIS ALT1 TSL 1 (best) BASIC15.33■□□□□ 0.05
IRX4P78413 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
IRX4P78413 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.05
IRX4P78413 TNS2-202ENST00000314276 4944 ntAPPRIS P4 TSL 1 (best) BASIC15.33■□□□□ 0.05
IRX4P78413 CDK17-201ENST00000261211 4157 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
IRX4P78413 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC15.33■□□□□ 0.05
IRX4P78413 SLC25A21-AS1-201ENST00000556667 1924 ntBASIC15.33■□□□□ 0.05
IRX4P78413 BX640514.1-201ENST00000583223 1918 ntBASIC15.33■□□□□ 0.05
IRX4P78413 MAGI1-218ENST00000621418 6225 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
IRX4P78413 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC15.33■□□□□ 0.05
IRX4P78413 MLXIPL-203ENST00000354613 3215 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
IRX4P78413 USP49-203ENST00000394253 9034 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
IRX4P78413 NLRX1-204ENST00000409991 3716 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
IRX4P78413 MRPL34-201ENST00000252602 968 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
IRX4P78413 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC15.33■□□□□ 0.04
IRX4P78413 FXNP2-201ENST00000411625 547 ntBASIC15.33■□□□□ 0.04
IRX4P78413 AC012506.3-201ENST00000415245 892 ntTSL 3 BASIC15.33■□□□□ 0.04
IRX4P78413 HINT2P1-201ENST00000419438 481 ntBASIC15.33■□□□□ 0.04
IRX4P78413 AL451065.1-201ENST00000428958 238 ntTSL 5 BASIC15.33■□□□□ 0.04
IRX4P78413 TMEM107-203ENST00000431792 455 ntTSL 3 BASIC15.33■□□□□ 0.04
IRX4P78413 BX324167.1-201ENST00000451118 805 ntTSL 5 BASIC15.33■□□□□ 0.04
IRX4P78413 AC129492.3-201ENST00000498285 460 ntAPPRIS P1 TSL 4 BASIC15.33■□□□□ 0.04
IRX4P78413 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC15.33■□□□□ 0.04
IRX4P78413 AC110285.1-205ENST00000572301 559 ntTSL 3 BASIC15.33■□□□□ 0.04
IRX4P78413 AC015910.1-201ENST00000579400 975 ntBASIC15.33■□□□□ 0.04
IRX4P78413 CYGB-203ENST00000589145 788 ntTSL 3 BASIC15.33■□□□□ 0.04
IRX4P78413 TUBB3-215ENST00000625617 570 ntTSL 4 BASIC15.33■□□□□ 0.04
IRX4P78413 AC006453.4-201ENST00000636949 1252 ntBASIC15.33■□□□□ 0.04
IRX4P78413 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
IRX4P78413 POMT1-204ENST00000402686 3038 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
IRX4P78413 MAPK14-202ENST00000229795 4319 ntAPPRIS ALT1 TSL 1 (best) BASIC15.33■□□□□ 0.04
IRX4P78413 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
IRX4P78413 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
IRX4P78413 PCMTD2-207ENST00000609372 1321 ntTSL 4 BASIC15.33■□□□□ 0.04
IRX4P78413 HSFX2-201ENST00000598963 1365 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
IRX4P78413 RIC8B-202ENST00000392837 5135 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
IRX4P78413 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
IRX4P78413 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC15.33■□□□□ 0.04
IRX4P78413 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
IRX4P78413 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC15.33■□□□□ 0.04
IRX4P78413 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC15.33■□□□□ 0.04
IRX4P78413 SLC22A12-203ENST00000377572 2887 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
IRX4P78413 G3BP2-202ENST00000359707 4883 ntAPPRIS P4 TSL 1 (best) BASIC15.33■□□□□ 0.04
IRX4P78413 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC15.33■□□□□ 0.04
IRX4P78413 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
IRX4P78413 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
IRX4P78413 OS9-204ENST00000389146 2091 ntTSL 2 BASIC15.32■□□□□ 0.04
IRX4P78413 E2F7-201ENST00000322886 5740 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
IRX4P78413 MOB3C-203ENST00000371940 5725 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
IRX4P78413 RBPMS-202ENST00000320203 3110 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
IRX4P78413 PBXIP1-202ENST00000368463 3212 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
IRX4P78413 HNRNPUL1-205ENST00000593587 2725 ntTSL 2 BASIC15.32■□□□□ 0.04
IRX4P78413 NOC2L-201ENST00000327044 2790 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
IRX4P78413 CAPN1-224ENST00000533129 2792 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
IRX4P78413 IRAK4-212ENST00000551736 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
IRX4P78413 AL365199.1-201ENST00000421320 1714 ntTSL 2 BASIC15.32■□□□□ 0.04
IRX4P78413 ATE1-202ENST00000369040 4803 ntTSL 2 BASIC15.32■□□□□ 0.04
IRX4P78413 KIFC3-207ENST00000543930 3018 ntTSL 2 BASIC15.32■□□□□ 0.04
IRX4P78413 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
IRX4P78413 AC027601.5-201ENST00000624065 2482 ntBASIC15.32■□□□□ 0.04
IRX4P78413 FOXD4L5-201ENST00000377420 3109 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
IRX4P78413 AC005899.8-201ENST00000625127 3153 ntTSL 5 BASIC15.32■□□□□ 0.04
IRX4P78413 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
IRX4P78413 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
IRX4P78413 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
IRX4P78413 CSH2-201ENST00000336844 1173 ntTSL 2 BASIC15.32■□□□□ 0.04
IRX4P78413 CSH2-202ENST00000345366 598 ntTSL 5 BASIC15.32■□□□□ 0.04
IRX4P78413 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
IRX4P78413 OSM-202ENST00000403389 1000 ntAPPRIS ALT2 TSL 3 BASIC15.32■□□□□ 0.04
IRX4P78413 MEMO1-204ENST00000407893 682 ntTSL 5 BASIC15.32■□□□□ 0.04
IRX4P78413 GHSR-202ENST00000427970 912 ntBASIC15.32■□□□□ 0.04
IRX4P78413 AP001790.1-201ENST00000511947 570 ntTSL 4 BASIC15.32■□□□□ 0.04
IRX4P78413 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
IRX4P78413 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC15.32■□□□□ 0.04
IRX4P78413 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC15.32■□□□□ 0.04
IRX4P78413 ANGPTL8-203ENST00000591200 504 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
IRX4P78413 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
IRX4P78413 KRT8P35-201ENST00000483942 1338 ntBASIC15.32■□□□□ 0.04
IRX4P78413 ITGAM-202ENST00000544665 4718 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
IRX4P78413 AC018735.1-201ENST00000437208 1502 ntBASIC15.32■□□□□ 0.04
IRX4P78413 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
IRX4P78413 FBXO8-202ENST00000503293 1546 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
IRX4P78413 SF1-209ENST00000433274 2317 ntTSL 2 BASIC15.32■□□□□ 0.04
IRX4P78413 DENND3-211ENST00000519811 5482 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
IRX4P78413 FUK-202ENST00000378912 3925 ntTSL 2 BASIC15.32■□□□□ 0.04
IRX4P78413 KATNA1-201ENST00000335643 1564 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
IRX4P78413 GRIP2-204ENST00000619221 7977 ntAPPRIS P5 TSL 5 BASIC15.32■□□□□ 0.04
IRX4P78413 TSPAN18-207ENST00000520358 3316 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
IRX4P78413 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
IRX4P78413 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC15.31■□□□□ 0.04
IRX4P78413 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
IRX4P78413 CBFA2T3-201ENST00000268679 4477 ntAPPRIS P4 TSL 1 (best) BASIC15.31■□□□□ 0.04
IRX4P78413 AC041040.2-201ENST00000622926 2899 ntBASIC15.31■□□□□ 0.04
IRX4P78413 C8orf49-201ENST00000525043 1968 ntBASIC15.31■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 42.5 ms