Protein–RNA interactions for Protein: P61619

SEC61A1, Protein transport protein Sec61 subunit alpha isoform 1, humanhuman

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1P61619 USP32P1-208ENST00000506594 1164 ntBASIC12.91□□□□□ -0.34
SEC61A1P61619 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
SEC61A1P61619 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC12.91□□□□□ -0.34
SEC61A1P61619 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
SEC61A1P61619 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
SEC61A1P61619 PIGL-212ENST00000581006 554 ntTSL 4 BASIC12.91□□□□□ -0.34
SEC61A1P61619 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC12.91□□□□□ -0.34
SEC61A1P61619 AC107373.2-201ENST00000607735 490 ntBASIC12.91□□□□□ -0.34
SEC61A1P61619 AL008721.1-201ENST00000609964 604 ntBASIC12.91□□□□□ -0.34
SEC61A1P61619 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC12.91□□□□□ -0.34
SEC61A1P61619 AL162274.1-201ENST00000617191 1098 ntBASIC12.91□□□□□ -0.34
SEC61A1P61619 RNF216-202ENST00000389902 3293 ntAPPRIS P4 TSL 1 (best) BASIC12.91□□□□□ -0.34
SEC61A1P61619 ALCAM-201ENST00000306107 4701 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
SEC61A1P61619 NLRP13-201ENST00000342929 3132 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
SEC61A1P61619 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
SEC61A1P61619 C7orf57-204ENST00000435376 1925 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
SEC61A1P61619 C7orf57-206ENST00000539619 1927 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
SEC61A1P61619 IFNA6-202ENST00000380210 1544 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
SEC61A1P61619 PPP1R3D-201ENST00000370996 3630 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
SEC61A1P61619 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC12.91□□□□□ -0.34
SEC61A1P61619 USE1-206ENST00000595101 1776 ntTSL 2 BASIC12.91□□□□□ -0.34
SEC61A1P61619 SPPL2B-209ENST00000613503 3456 ntAPPRIS P4 TSL 1 (best) BASIC12.91□□□□□ -0.34
SEC61A1P61619 RIPOR3-202ENST00000327979 4377 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
SEC61A1P61619 AC015802.6-201ENST00000640006 5654 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
SEC61A1P61619 WNK1-201ENST00000315939 10452 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
SEC61A1P61619 CHMP7-202ENST00000397677 3403 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
SEC61A1P61619 ARMCX2-201ENST00000328766 2762 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
SEC61A1P61619 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
SEC61A1P61619 DENND1C-202ENST00000543576 2395 ntAPPRIS ALT2 TSL 2 BASIC12.91□□□□□ -0.34
SEC61A1P61619 KCNAB2-219ENST00000602612 2396 ntTSL 2 BASIC12.91□□□□□ -0.34
SEC61A1P61619 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
SEC61A1P61619 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
SEC61A1P61619 MAPRE2-201ENST00000300249 4265 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
SEC61A1P61619 ZNF641-201ENST00000301042 4544 ntTSL 5 BASIC12.91□□□□□ -0.34
SEC61A1P61619 MED15-203ENST00000382974 2235 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
SEC61A1P61619 MYO16-203ENST00000357550 6779 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
SEC61A1P61619 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC12.9□□□□□ -0.34
SEC61A1P61619 CLCNKA-202ENST00000375692 2581 ntAPPRIS ALT1 TSL 1 (best) BASIC12.9□□□□□ -0.34
SEC61A1P61619 RPS6KA1-213ENST00000526792 2596 ntTSL 5 BASIC12.9□□□□□ -0.34
SEC61A1P61619 GLB1L3-201ENST00000389887 3566 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
SEC61A1P61619 MYH14-201ENST00000262269 3848 ntTSL 5 BASIC12.9□□□□□ -0.34
SEC61A1P61619 SLC35D1-201ENST00000235345 6162 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
SEC61A1P61619 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC12.9□□□□□ -0.34
SEC61A1P61619 GNAI2-201ENST00000266027 2169 ntTSL 2 BASIC12.9□□□□□ -0.34
SEC61A1P61619 MFF-204ENST00000353339 2186 ntTSL 5 BASIC12.9□□□□□ -0.34
SEC61A1P61619 PRRT2-201ENST00000300797 3002 ntTSL 2 BASIC12.9□□□□□ -0.34
SEC61A1P61619 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
SEC61A1P61619 KARS-201ENST00000302445 2005 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
SEC61A1P61619 APOB-202ENST00000399256 3128 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
SEC61A1P61619 APBB1-201ENST00000299402 2636 ntAPPRIS P3 TSL 5 BASIC12.9□□□□□ -0.34
SEC61A1P61619 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
SEC61A1P61619 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
SEC61A1P61619 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
SEC61A1P61619 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
SEC61A1P61619 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC12.9□□□□□ -0.34
SEC61A1P61619 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
SEC61A1P61619 ACA64.2-201ENST00000459014 129 ntBASIC12.9□□□□□ -0.34
SEC61A1P61619 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC12.9□□□□□ -0.34
SEC61A1P61619 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
SEC61A1P61619 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC12.9□□□□□ -0.34
SEC61A1P61619 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
SEC61A1P61619 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC12.9□□□□□ -0.34
SEC61A1P61619 RAB43P1-201ENST00000561790 589 ntBASIC12.9□□□□□ -0.34
SEC61A1P61619 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC12.9□□□□□ -0.34
SEC61A1P61619 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
SEC61A1P61619 IFT20-216ENST00000588477 774 ntTSL 5 BASIC12.9□□□□□ -0.34
SEC61A1P61619 APOC4-201ENST00000591600 348 ntTSL 3 BASIC12.9□□□□□ -0.34
SEC61A1P61619 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC12.9□□□□□ -0.34
SEC61A1P61619 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
SEC61A1P61619 AC005252.2-201ENST00000624630 1141 ntBASIC12.9□□□□□ -0.34
SEC61A1P61619 SERF2-217ENST00000630046 862 ntTSL 5 BASIC12.9□□□□□ -0.34
SEC61A1P61619 AL645728.2-202ENST00000641679 227 ntBASIC12.9□□□□□ -0.34
SEC61A1P61619 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC12.9□□□□□ -0.34
SEC61A1P61619 RALGAPA1-201ENST00000307138 7911 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
SEC61A1P61619 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
SEC61A1P61619 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
SEC61A1P61619 ADCYAP1R1-207ENST00000614107 6575 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
SEC61A1P61619 CAMKV-202ENST00000463537 2818 ntTSL 5 BASIC12.9□□□□□ -0.34
SEC61A1P61619 ADPRHL1-204ENST00000612156 9759 ntTSL 5 BASIC12.9□□□□□ -0.34
SEC61A1P61619 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
SEC61A1P61619 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC12.9□□□□□ -0.34
SEC61A1P61619 AC019294.4-201ENST00000561777 2905 ntBASIC12.9□□□□□ -0.34
SEC61A1P61619 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC12.9□□□□□ -0.34
SEC61A1P61619 RRAGB-202ENST00000374941 2061 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
SEC61A1P61619 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC12.9□□□□□ -0.34
SEC61A1P61619 AC068987.4-201ENST00000562343 2094 ntTSL 5 BASIC12.9□□□□□ -0.34
SEC61A1P61619 AL357054.3-201ENST00000607084 2055 ntTSL 5 BASIC12.9□□□□□ -0.34
SEC61A1P61619 UACA-201ENST00000322954 6939 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
SEC61A1P61619 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC12.9□□□□□ -0.34
SEC61A1P61619 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
SEC61A1P61619 FHOD3-201ENST00000257209 4967 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
SEC61A1P61619 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
SEC61A1P61619 MKNK1-203ENST00000371945 2618 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.35
SEC61A1P61619 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC12.9□□□□□ -0.35
SEC61A1P61619 LINC01873-201ENST00000428647 1679 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
SEC61A1P61619 NHSL1-202ENST00000343505 6535 ntAPPRIS P3 TSL 5 BASIC12.89□□□□□ -0.35
SEC61A1P61619 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC12.89□□□□□ -0.35
SEC61A1P61619 LINC00863-201ENST00000439559 3287 ntTSL 5 BASIC12.89□□□□□ -0.35
SEC61A1P61619 TPM3P9-201ENST00000424846 2920 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
SEC61A1P61619 GOLGA8VP-201ENST00000559009 1798 ntBASIC12.89□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 41.5 ms