Protein–RNA interactions for Protein: P58304

VSX2, Visual system homeobox 2, humanhuman

Predicted RBP Predictions only

Length 361 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSX2P58304 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
VSX2P58304 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC14.02□□□□□ -0.16
VSX2P58304 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC14.02□□□□□ -0.16
VSX2P58304 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
VSX2P58304 KIFC3-207ENST00000543930 3018 ntTSL 2 BASIC14.02□□□□□ -0.16
VSX2P58304 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
VSX2P58304 APBB1-221ENST00000609360 2642 ntAPPRIS ALT1 TSL 5 BASIC14.02□□□□□ -0.16
VSX2P58304 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
VSX2P58304 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.16
VSX2P58304 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
VSX2P58304 SLC38A5-213ENST00000620913 1993 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
VSX2P58304 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
VSX2P58304 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
VSX2P58304 LINC02076-201ENST00000577684 1871 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
VSX2P58304 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC14.02□□□□□ -0.16
VSX2P58304 TMEM9-204ENST00000367334 1529 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
VSX2P58304 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
VSX2P58304 TPRKB-202ENST00000318190 819 ntTSL 5 BASIC14.02□□□□□ -0.17
VSX2P58304 TSPO-201ENST00000329563 955 ntAPPRIS P1 TSL 3 BASIC14.02□□□□□ -0.17
VSX2P58304 RBM8A-201ENST00000369307 796 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
VSX2P58304 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
VSX2P58304 PSME1-202ENST00000382708 1136 ntTSL 2 BASIC14.02□□□□□ -0.17
VSX2P58304 HNRNPA1P27-201ENST00000412087 955 ntBASIC14.02□□□□□ -0.17
VSX2P58304 PTPA-215ENST00000432124 567 ntTSL 4 BASIC14.02□□□□□ -0.17
VSX2P58304 NKAIN1P1-201ENST00000435754 582 ntBASIC14.02□□□□□ -0.17
VSX2P58304 AC012507.1-201ENST00000454890 600 ntTSL 4 BASIC14.02□□□□□ -0.17
VSX2P58304 RPL18P13-201ENST00000478088 569 ntBASIC14.02□□□□□ -0.17
VSX2P58304 AC005740.2-201ENST00000511085 419 ntBASIC14.02□□□□□ -0.17
VSX2P58304 FAM86B1-218ENST00000534520 808 ntTSL 2 BASIC14.02□□□□□ -0.17
VSX2P58304 ACYP1-206ENST00000555694 565 ntAPPRIS P1 TSL 3 BASIC14.02□□□□□ -0.17
VSX2P58304 TSPO-206ENST00000583777 636 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
VSX2P58304 AC008805.1-201ENST00000590892 364 ntBASIC14.02□□□□□ -0.17
VSX2P58304 NCR1-206ENST00000598576 996 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
VSX2P58304 BNIP3P13-201ENST00000599968 566 ntBASIC14.02□□□□□ -0.17
VSX2P58304 AC022748.3-201ENST00000621828 275 ntBASIC14.02□□□□□ -0.17
VSX2P58304 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
VSX2P58304 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
VSX2P58304 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC14.02□□□□□ -0.17
VSX2P58304 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC14.02□□□□□ -0.17
VSX2P58304 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
VSX2P58304 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC14.02□□□□□ -0.17
VSX2P58304 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
VSX2P58304 KYAT1-205ENST00000436267 2487 ntTSL 2 BASIC14.02□□□□□ -0.17
VSX2P58304 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.17
VSX2P58304 PTENP1-202ENST00000532280 3996 ntBASIC14.02□□□□□ -0.17
VSX2P58304 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC14.02□□□□□ -0.17
VSX2P58304 LINC01250-201ENST00000457478 2344 ntTSL 2 BASIC14.02□□□□□ -0.17
VSX2P58304 SNPH-203ENST00000614659 5354 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
VSX2P58304 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
VSX2P58304 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
VSX2P58304 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
VSX2P58304 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
VSX2P58304 TMEM200C-202ENST00000581347 10638 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
VSX2P58304 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC14.01□□□□□ -0.17
VSX2P58304 KIF3C-201ENST00000264712 5344 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
VSX2P58304 SERPING1-204ENST00000378324 1751 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
VSX2P58304 ADCY6-201ENST00000307885 6464 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
VSX2P58304 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
VSX2P58304 YTHDF3-216ENST00000623280 5193 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
VSX2P58304 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
VSX2P58304 CRHR2-202ENST00000348438 1600 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
VSX2P58304 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC14.01□□□□□ -0.17
VSX2P58304 POM121-202ENST00000395270 7011 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
VSX2P58304 AL590440.2-201ENST00000641973 1595 ntBASIC14.01□□□□□ -0.17
VSX2P58304 PDHB-206ENST00000474765 1503 ntTSL 5 BASIC14.01□□□□□ -0.17
VSX2P58304 ELAVL1-205ENST00000596459 1473 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
VSX2P58304 ZNF664-202ENST00000392404 4262 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
VSX2P58304 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
VSX2P58304 RANBP1-208ENST00000430524 1389 ntTSL 3 BASIC14.01□□□□□ -0.17
VSX2P58304 KRT8P28-201ENST00000433288 1390 ntBASIC14.01□□□□□ -0.17
VSX2P58304 RDX-218ENST00000544551 4117 ntTSL 2 BASIC14.01□□□□□ -0.17
VSX2P58304 DSEL-201ENST00000310045 9531 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
VSX2P58304 PLLP-205ENST00000613167 7578 ntTSL 5 BASIC14.01□□□□□ -0.17
VSX2P58304 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
VSX2P58304 GSTT2B-201ENST00000290765 1099 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
VSX2P58304 GTSF1-201ENST00000305879 804 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
VSX2P58304 RPL35-201ENST00000348462 455 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
VSX2P58304 C1orf53-201ENST00000367393 588 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
VSX2P58304 NUDT1-206ENST00000397049 714 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
VSX2P58304 LIMS1-206ENST00000414829 439 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
VSX2P58304 MIR663AHG-201ENST00000427348 1213 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
VSX2P58304 AC104073.2-201ENST00000453737 312 ntBASIC14.01□□□□□ -0.17
VSX2P58304 PGAP2-214ENST00000465307 1100 ntTSL 2 BASIC14.01□□□□□ -0.17
VSX2P58304 LIMS3-205ENST00000487150 782 ntTSL 3 BASIC14.01□□□□□ -0.17
VSX2P58304 AC106794.1-201ENST00000506935 792 ntBASIC14.01□□□□□ -0.17
VSX2P58304 ZNF385A-213ENST00000551771 1111 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
VSX2P58304 BLOC1S1-205ENST00000551926 531 ntTSL 5 BASIC14.01□□□□□ -0.17
VSX2P58304 LINC02332-201ENST00000557232 386 ntTSL 3 BASIC14.01□□□□□ -0.17
VSX2P58304 RN7SL163P-201ENST00000583100 276 ntBASIC14.01□□□□□ -0.17
VSX2P58304 AC068790.8-201ENST00000618862 504 ntAPPRIS P1 TSL 3 BASIC14.01□□□□□ -0.17
VSX2P58304 AC007191.1-201ENST00000623179 2995 ntBASIC14.01□□□□□ -0.17
VSX2P58304 RPL35-206ENST00000629845 340 ntTSL 5 BASIC14.01□□□□□ -0.17
VSX2P58304 PCBP2-OT1-201ENST00000634357 590 ntBASIC14.01□□□□□ -0.17
VSX2P58304 Z98259.2-201ENST00000641583 609 ntBASIC14.01□□□□□ -0.17
VSX2P58304 AC004923.1-202ENST00000642106 209 ntBASIC14.01□□□□□ -0.17
VSX2P58304 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
VSX2P58304 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
VSX2P58304 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC14.01□□□□□ -0.17
VSX2P58304 COCH-203ENST00000460581 2688 ntTSL 2 BASIC14.01□□□□□ -0.17
VSX2P58304 AL669831.1-201ENST00000506640 6432 ntTSL 5 BASIC14.01□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 82.5 ms