| WNT3A | P56704 | ARHGEF26-AS1-204 | ENST00000491862 | 2598 nt | TSL 1 (best) BASIC | 14.76 | □□□□□ -0.05 | | |
| WNT3A | P56704 | NEU2-201 | ENST00000233840 | 1143 nt | APPRIS P1 TSL 1 (best) BASIC | 14.76 | □□□□□ -0.05 | | |
| WNT3A | P56704 | ROPN1-202 | ENST00000405845 | 1007 nt | APPRIS P1 TSL 1 (best) BASIC | 14.76 | □□□□□ -0.05 | | |
| WNT3A | P56704 | FAM21FP-201 | ENST00000426241 | 1131 nt | BASIC | 14.76 | □□□□□ -0.05 | | |
| WNT3A | P56704 | GAS5-209 | ENST00000430245 | 723 nt | TSL 3 BASIC | 14.76 | □□□□□ -0.05 | | |
| WNT3A | P56704 | AL157407.1-201 | ENST00000435784 | 904 nt | BASIC | 14.76 | □□□□□ -0.05 | | |
| WNT3A | P56704 | KLF2P1-201 | ENST00000447438 | 1042 nt | BASIC | 14.76 | □□□□□ -0.05 | | |
| WNT3A | P56704 | BNIP3P42-201 | ENST00000454982 | 569 nt | BASIC | 14.76 | □□□□□ -0.05 | | |
| WNT3A | P56704 | AC080188.2-201 | ENST00000508985 | 552 nt | TSL 4 BASIC | 14.76 | □□□□□ -0.05 | | |
| WNT3A | P56704 | AC113192.2-201 | ENST00000525320 | 308 nt | TSL 3 BASIC | 14.76 | □□□□□ -0.05 | | |
| WNT3A | P56704 | AC025154.1-201 | ENST00000552806 | 560 nt | TSL 5 BASIC | 14.76 | □□□□□ -0.05 | | |
| WNT3A | P56704 | TXNL4A-212 | ENST00000592957 | 546 nt | TSL 3 BASIC | 14.76 | □□□□□ -0.05 | | |
| WNT3A | P56704 | AC010328.2-201 | ENST00000597698 | 1111 nt | BASIC | 14.76 | □□□□□ -0.05 | | |
| WNT3A | P56704 | BNIP3P29-201 | ENST00000598302 | 571 nt | BASIC | 14.76 | □□□□□ -0.05 | | |
| WNT3A | P56704 | AC011447.5-201 | ENST00000616168 | 564 nt | BASIC | 14.76 | □□□□□ -0.05 | | |
| WNT3A | P56704 | HOXB4-201 | ENST00000332503 | 3757 nt | APPRIS P1 TSL 1 (best) BASIC | 14.76 | □□□□□ -0.05 | | |
| WNT3A | P56704 | CYB561D1-204 | ENST00000420578 | 3326 nt | APPRIS P3 TSL 1 (best) BASIC | 14.76 | □□□□□ -0.05 | | |
| WNT3A | P56704 | TAGLN2-202 | ENST00000368096 | 1603 nt | TSL 1 (best) BASIC | 14.76 | □□□□□ -0.05 | | |
| WNT3A | P56704 | TINF2-215 | ENST00000626689 | 1643 nt | APPRIS ALT2 TSL 5 BASIC | 14.76 | □□□□□ -0.05 | | |
| WNT3A | P56704 | CPN2-202 | ENST00000429275 | 2008 nt | APPRIS P1 TSL 5 BASIC | 14.76 | □□□□□ -0.05 | | |
| WNT3A | P56704 | ATP5F1-202 | ENST00000369722 | 3156 nt | APPRIS P1 TSL 1 (best) BASIC | 14.76 | □□□□□ -0.05 | | |
| WNT3A | P56704 | LIMK2-203 | ENST00000340552 | 2789 nt | TSL 1 (best) BASIC | 14.76 | □□□□□ -0.05 | | |
| WNT3A | P56704 | FUK-202 | ENST00000378912 | 3925 nt | TSL 2 BASIC | 14.76 | □□□□□ -0.05 | | |
| WNT3A | P56704 | DUS2-201 | ENST00000358896 | 1933 nt | APPRIS P1 TSL 2 BASIC | 14.76 | □□□□□ -0.05 | | |
| WNT3A | P56704 | ILF2-205 | ENST00000615950 | 1906 nt | TSL 2 BASIC | 14.76 | □□□□□ -0.05 | | |
| WNT3A | P56704 | ST20-AS1-201 | ENST00000560255 | 4223 nt | BASIC | 14.76 | □□□□□ -0.05 | | |
| WNT3A | P56704 | TPD52L2-202 | ENST00000346249 | 2297 nt | APPRIS ALT1 TSL 1 (best) BASIC | 14.76 | □□□□□ -0.05 | | |
| WNT3A | P56704 | KIAA0930-203 | ENST00000391627 | 2623 nt | TSL 1 (best) BASIC | 14.76 | □□□□□ -0.05 | | |
| WNT3A | P56704 | ANOS1-201 | ENST00000262648 | 6314 nt | APPRIS P1 TSL 1 (best) BASIC | 14.76 | □□□□□ -0.05 | | |
| WNT3A | P56704 | SCML4-201 | ENST00000369020 | 1491 nt | APPRIS P1 TSL 5 BASIC | 14.76 | □□□□□ -0.05 | | |
| WNT3A | P56704 | ELOVL1-201 | ENST00000372458 | 1477 nt | APPRIS P1 TSL 1 (best) BASIC | 14.76 | □□□□□ -0.05 | | |
| WNT3A | P56704 | STK33-203 | ENST00000396672 | 2558 nt | APPRIS P1 TSL 2 BASIC | 14.76 | □□□□□ -0.05 | | |
| WNT3A | P56704 | MOCS3-201 | ENST00000244051 | 5106 nt | APPRIS P1 BASIC | 14.76 | □□□□□ -0.05 | | |
| WNT3A | P56704 | LHX6-207 | ENST00000541397 | 2942 nt | TSL 2 BASIC | 14.76 | □□□□□ -0.05 | | |
| WNT3A | P56704 | ZNF256-201 | ENST00000282308 | 2172 nt | APPRIS P1 TSL 1 (best) BASIC | 14.75 | □□□□□ -0.05 | | |
| WNT3A | P56704 | CCNF-202 | ENST00000397066 | 4283 nt | APPRIS P1 TSL 1 (best) BASIC | 14.75 | □□□□□ -0.05 | | |
| WNT3A | P56704 | ZFP90-209 | ENST00000570495 | 4636 nt | APPRIS P1 TSL 1 (best) BASIC | 14.75 | □□□□□ -0.05 | | |
| WNT3A | P56704 | LINC01671-201 | ENST00000419628 | 1775 nt | TSL 1 (best) BASIC | 14.75 | □□□□□ -0.05 | | |
| WNT3A | P56704 | DDC-AS1-201 | ENST00000454521 | 1776 nt | TSL 2 BASIC | 14.75 | □□□□□ -0.05 | | |
| WNT3A | P56704 | MPP2-214 | ENST00000523501 | 2121 nt | APPRIS P1 TSL 2 BASIC | 14.75 | □□□□□ -0.05 | | |
| WNT3A | P56704 | SMOC2-201 | ENST00000354536 | 3150 nt | TSL 1 (best) BASIC | 14.75 | □□□□□ -0.05 | | |
| WNT3A | P56704 | SORCS2-201 | ENST00000329016 | 5582 nt | APPRIS ALT2 TSL 5 BASIC | 14.75 | □□□□□ -0.05 | | |
| WNT3A | P56704 | CDH1-213 | ENST00000612417 | 2068 nt | TSL 5 BASIC | 14.75 | □□□□□ -0.05 | | |
| WNT3A | P56704 | FAS-202 | ENST00000352159 | 1722 nt | TSL 5 BASIC | 14.75 | □□□□□ -0.05 | | |
| WNT3A | P56704 | PAX7-202 | ENST00000400661 | 1700 nt | TSL 1 (best) BASIC | 14.75 | □□□□□ -0.05 | | |
| WNT3A | P56704 | NMNAT3-203 | ENST00000413939 | 1711 nt | TSL 2 BASIC | 14.75 | □□□□□ -0.05 | | |
| WNT3A | P56704 | SEZ6L-209 | ENST00000529632 | 6534 nt | APPRIS ALT2 TSL 1 (best) BASIC | 14.75 | □□□□□ -0.05 | | |
| WNT3A | P56704 | TCOF1-202 | ENST00000377797 | 5095 nt | APPRIS ALT2 TSL 5 BASIC | 14.75 | □□□□□ -0.05 | | |
| WNT3A | P56704 | PYROXD2-201 | ENST00000370575 | 2028 nt | APPRIS P1 TSL 1 (best) BASIC | 14.75 | □□□□□ -0.05 | | |
| WNT3A | P56704 | ALG1-204 | ENST00000588623 | 2671 nt | TSL 1 (best) BASIC | 14.75 | □□□□□ -0.05 | | |
| WNT3A | P56704 | LTBP3-221 | ENST00000532932 | 3327 nt | TSL 2 BASIC | 14.75 | □□□□□ -0.05 | | |
| WNT3A | P56704 | PSMD8-209 | ENST00000602911 | 1330 nt | TSL 1 (best) BASIC | 14.75 | □□□□□ -0.05 | | |
| WNT3A | P56704 | PPL-201 | ENST00000345988 | 6238 nt | APPRIS P2 TSL 1 (best) BASIC | 14.75 | □□□□□ -0.05 | | |
| WNT3A | P56704 | UPK3A-201 | ENST00000216211 | 1051 nt | APPRIS P3 TSL 1 (best) BASIC | 14.75 | □□□□□ -0.05 | | |
| WNT3A | P56704 | SPAG11A-201 | ENST00000326558 | 612 nt | TSL 1 (best) BASIC | 14.75 | □□□□□ -0.05 | | |
| WNT3A | P56704 | SMIM11A-203 | ENST00000399299 | 1033 nt | TSL 1 (best) BASIC | 14.75 | □□□□□ -0.05 | | |
| WNT3A | P56704 | PSTK-202 | ENST00000405485 | 1047 nt | APPRIS P2 TSL 2 BASIC | 14.75 | □□□□□ -0.05 | | |
| WNT3A | P56704 | AL450998.2-201 | ENST00000418525 | 639 nt | TSL 3 BASIC | 14.75 | □□□□□ -0.05 | | |
| WNT3A | P56704 | AL354877.1-201 | ENST00000424412 | 413 nt | BASIC | 14.75 | □□□□□ -0.05 | | |
| WNT3A | P56704 | EPDR1-203 | ENST00000425345 | 947 nt | APPRIS ALT2 TSL 1 (best) BASIC | 14.75 | □□□□□ -0.05 | | |
| WNT3A | P56704 | SGK2-207 | ENST00000426287 | 1182 nt | TSL 1 (best) BASIC | 14.75 | □□□□□ -0.05 | | |
| WNT3A | P56704 | AC092800.1-201 | ENST00000449492 | 579 nt | TSL 2 BASIC | 14.75 | □□□□□ -0.05 | | |
| WNT3A | P56704 | GDNF-AS1-201 | ENST00000503382 | 604 nt | TSL 1 (best) BASIC | 14.75 | □□□□□ -0.05 | | |
| WNT3A | P56704 | RNA5SP412-201 | ENST00000516234 | 123 nt | BASIC | 14.75 | □□□□□ -0.05 | | |
| WNT3A | P56704 | RCN1-210 | ENST00000532942 | 1191 nt | APPRIS ALT2 TSL 2 BASIC | 14.75 | □□□□□ -0.05 | | |
| WNT3A | P56704 | EEF1AKMT3-204 | ENST00000551420 | 836 nt | TSL 2 BASIC | 14.75 | □□□□□ -0.05 | | |
| WNT3A | P56704 | C14orf132-204 | ENST00000556728 | 774 nt | APPRIS P1 TSL 2 BASIC | 14.75 | □□□□□ -0.05 | | |
| WNT3A | P56704 | AC100827.2-201 | ENST00000563214 | 1194 nt | BASIC | 14.75 | □□□□□ -0.05 | | |
| WNT3A | P56704 | AC007342.4-201 | ENST00000566383 | 584 nt | TSL 4 BASIC | 14.75 | □□□□□ -0.05 | | |
| WNT3A | P56704 | TXNDC17-202 | ENST00000570330 | 459 nt | TSL 2 BASIC | 14.75 | □□□□□ -0.05 | | |
| WNT3A | P56704 | OCEL1-213 | ENST00000601529 | 942 nt | TSL 3 BASIC | 14.75 | □□□□□ -0.05 | | |
| WNT3A | P56704 | ZNF347-208 | ENST00000601804 | 496 nt | TSL 4 BASIC | 14.75 | □□□□□ -0.05 | | |
| WNT3A | P56704 | LCN8-205 | ENST00000612714 | 638 nt | APPRIS ALT2 TSL 1 (best) BASIC | 14.75 | □□□□□ -0.05 | | |
| WNT3A | P56704 | AL162426.1-201 | ENST00000624141 | 743 nt | BASIC | 14.75 | □□□□□ -0.05 | | |
| WNT3A | P56704 | MAPKBP1-215 | ENST00000514566 | 5394 nt | TSL 1 (best) BASIC | 14.75 | □□□□□ -0.05 | | |
| WNT3A | P56704 | SNPH-203 | ENST00000614659 | 5354 nt | APPRIS ALT2 TSL 1 (best) BASIC | 14.75 | □□□□□ -0.05 | | |
| WNT3A | P56704 | MEOX2-201 | ENST00000262041 | 2500 nt | APPRIS P1 TSL 1 (best) BASIC | 14.75 | □□□□□ -0.05 | | |
| WNT3A | P56704 | MAP2K1-201 | ENST00000307102 | 3410 nt | APPRIS P1 TSL 1 (best) BASIC | 14.75 | □□□□□ -0.05 | | |
| WNT3A | P56704 | AL139260.2-201 | ENST00000622355 | 2171 nt | TSL 2 BASIC | 14.75 | □□□□□ -0.05 | | |
| WNT3A | P56704 | B3GNT7-201 | ENST00000287590 | 3706 nt | APPRIS P1 TSL 1 (best) BASIC | 14.75 | □□□□□ -0.05 | | |
| WNT3A | P56704 | SC5D-201 | ENST00000264027 | 2456 nt | APPRIS P1 TSL 1 (best) BASIC | 14.75 | □□□□□ -0.05 | | |
| WNT3A | P56704 | NXF1-213 | ENST00000532297 | 2795 nt | APPRIS P1 TSL 5 BASIC | 14.75 | □□□□□ -0.05 | | |
| WNT3A | P56704 | ZSCAN32-215 | ENST00000618425 | 2788 nt | TSL 2 BASIC | 14.75 | □□□□□ -0.05 | | |
| WNT3A | P56704 | AC015818.8-201 | ENST00000587907 | 1519 nt | BASIC | 14.75 | □□□□□ -0.05 | | |
| WNT3A | P56704 | NAALADL1-202 | ENST00000355721 | 2100 nt | TSL 5 BASIC | 14.75 | □□□□□ -0.05 | | |
| WNT3A | P56704 | TLE3-203 | ENST00000451782 | 2356 nt | APPRIS ALT1 TSL 5 BASIC | 14.75 | □□□□□ -0.05 | | |
| WNT3A | P56704 | SPRY1-208 | ENST00000622283 | 2352 nt | APPRIS P1 TSL 2 BASIC | 14.75 | □□□□□ -0.05 | | |
| WNT3A | P56704 | LINC01010-201 | ENST00000431422 | 2069 nt | TSL 2 BASIC | 14.75 | □□□□□ -0.05 | | |
| WNT3A | P56704 | GPSM3-209 | ENST00000487761 | 1460 nt | TSL 5 BASIC | 14.75 | □□□□□ -0.05 | | |
| WNT3A | P56704 | KIF1C-201 | ENST00000320785 | 7919 nt | APPRIS P1 TSL 1 (best) BASIC | 14.75 | □□□□□ -0.05 | | |
| WNT3A | P56704 | C7orf72-201 | ENST00000297001 | 2028 nt | APPRIS P1 TSL 5 BASIC | 14.75 | □□□□□ -0.05 | | |
| WNT3A | P56704 | SYT9-201 | ENST00000318881 | 3955 nt | APPRIS P1 TSL 1 (best) BASIC | 14.75 | □□□□□ -0.05 | | |
| WNT3A | P56704 | CLEC12A-AS1-201 | ENST00000420905 | 3956 nt | TSL 2 BASIC | 14.75 | □□□□□ -0.05 | | |
| WNT3A | P56704 | MED12L-203 | ENST00000422248 | 2757 nt | APPRIS ALT2 TSL 2 BASIC | 14.74 | □□□□□ -0.05 | | |
| WNT3A | P56704 | RNF170-209 | ENST00000534961 | 4116 nt | APPRIS P1 TSL 1 (best) BASIC | 14.74 | □□□□□ -0.05 | | |
| WNT3A | P56704 | MKNK1-204 | ENST00000371946 | 2719 nt | TSL 1 (best) BASIC | 14.74 | □□□□□ -0.05 | | |
| WNT3A | P56704 | RNF150-201 | ENST00000306799 | 4535 nt | TSL 1 (best) BASIC | 14.74 | □□□□□ -0.05 | | |
| WNT3A | P56704 | ZBED1-203 | ENST00000381223 | 4510 nt | APPRIS P1 TSL 2 BASIC | 14.74 | □□□□□ -0.05 | | |
| WNT3A | P56704 | AL008718.2-201 | ENST00000609206 | 1313 nt | BASIC | 14.74 | □□□□□ -0.05 | | |
| WNT3A | P56704 | ADI1-201 | ENST00000327435 | 2391 nt | APPRIS P1 TSL 1 (best) BASIC | 14.74 | □□□□□ -0.05 | | |