Protein–RNA interactions for Protein: P55854

SUMO3, Small ubiquitin-related modifier 3, humanhuman

Predicted RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3P55854 ROPN1-207ENST00000484329 566 ntTSL 3 BASIC13.19□□□□□ -0.3
SUMO3P55854 HLA-J-204ENST00000495278 958 ntBASIC13.19□□□□□ -0.3
SUMO3P55854 PRSS30P-205ENST00000506153 699 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
SUMO3P55854 AC022217.1-201ENST00000521069 738 ntBASIC13.19□□□□□ -0.3
SUMO3P55854 AP000438.1-201ENST00000543624 749 ntTSL 3 BASIC13.19□□□□□ -0.3
SUMO3P55854 AC120498.1-201ENST00000563593 476 ntTSL 4 BASIC13.19□□□□□ -0.3
SUMO3P55854 AC079336.1-201ENST00000583156 420 ntTSL 3 BASIC13.19□□□□□ -0.3
SUMO3P55854 MRPL34-203ENST00000595444 863 ntAPPRIS ALT2 TSL 3 BASIC13.19□□□□□ -0.3
SUMO3P55854 AC090386.2-201ENST00000623010 1039 ntBASIC13.19□□□□□ -0.3
SUMO3P55854 AC004706.3-207ENST00000634823 977 ntTSL 5 BASIC13.19□□□□□ -0.3
SUMO3P55854 AC004923.1-202ENST00000642106 209 ntBASIC13.19□□□□□ -0.3
SUMO3P55854 SLC6A20-202ENST00000358525 5423 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
SUMO3P55854 GPX3-201ENST00000388825 1636 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
SUMO3P55854 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
SUMO3P55854 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC13.19□□□□□ -0.3
SUMO3P55854 SLC38A5-213ENST00000620913 1993 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
SUMO3P55854 AC016397.2-201ENST00000624848 1985 ntBASIC13.19□□□□□ -0.3
SUMO3P55854 KCP-203ENST00000610776 5108 ntTSL 5 BASIC13.19□□□□□ -0.3
SUMO3P55854 PCDH10-203ENST00000618019 4574 ntAPPRIS ALT2 BASIC13.19□□□□□ -0.3
SUMO3P55854 GNAO1-202ENST00000262494 5767 ntAPPRIS ALT1 TSL 1 (best) BASIC13.19□□□□□ -0.3
SUMO3P55854 INTS11-248ENST00000545578 2263 ntTSL 2 BASIC13.19□□□□□ -0.3
SUMO3P55854 CYP4F23P-201ENST00000593402 1579 ntBASIC13.19□□□□□ -0.3
SUMO3P55854 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC13.19□□□□□ -0.3
SUMO3P55854 STX1B-201ENST00000215095 4697 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
SUMO3P55854 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC13.19□□□□□ -0.3
SUMO3P55854 HSPA8P5-201ENST00000456928 2069 ntBASIC13.19□□□□□ -0.3
SUMO3P55854 C12orf73-201ENST00000378090 1738 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
SUMO3P55854 AC004899.1-201ENST00000424687 1714 ntBASIC13.19□□□□□ -0.3
SUMO3P55854 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC13.19□□□□□ -0.3
SUMO3P55854 FAM90A7P-201ENST00000382628 1395 ntBASIC13.19□□□□□ -0.3
SUMO3P55854 FAM90A23P-201ENST00000400136 1395 ntBASIC13.19□□□□□ -0.3
SUMO3P55854 SLCO2B1-217ENST00000532236 2593 ntAPPRIS ALT2 TSL 2 BASIC13.19□□□□□ -0.3
SUMO3P55854 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC13.19□□□□□ -0.3
SUMO3P55854 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SUMO3P55854 AGAP9-201ENST00000452145 2387 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SUMO3P55854 ESS2-201ENST00000252137 5392 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SUMO3P55854 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SUMO3P55854 MYH11-201ENST00000300036 6029 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
SUMO3P55854 SDCBP2-AS1-201ENST00000446423 1811 ntTSL 2 BASIC13.18□□□□□ -0.3
SUMO3P55854 CTSW-204ENST00000528419 1341 ntTSL 2 BASIC13.18□□□□□ -0.3
SUMO3P55854 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SUMO3P55854 HARS2-201ENST00000230771 2483 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SUMO3P55854 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
SUMO3P55854 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC13.18□□□□□ -0.3
SUMO3P55854 SLC51A-201ENST00000296327 1463 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SUMO3P55854 SPATA16-201ENST00000351008 2106 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SUMO3P55854 CCDC180-210ENST00000529487 5242 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SUMO3P55854 WDR59-201ENST00000262144 5898 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
SUMO3P55854 ZNF831-201ENST00000371030 9401 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SUMO3P55854 MTMR6-201ENST00000381801 5659 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SUMO3P55854 ALDOA-203ENST00000395248 2447 ntTSL 5 BASIC13.18□□□□□ -0.3
SUMO3P55854 STK33-203ENST00000396672 2558 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
SUMO3P55854 SBF1P1-201ENST00000444527 5631 ntBASIC13.18□□□□□ -0.3
SUMO3P55854 NPFF-201ENST00000267017 592 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SUMO3P55854 CRABP1-201ENST00000299529 772 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SUMO3P55854 CALCA-201ENST00000331587 843 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
SUMO3P55854 MIR1908-201ENST00000410394 80 ntBASIC13.18□□□□□ -0.3
SUMO3P55854 KRT18P36-201ENST00000411618 1276 ntBASIC13.18□□□□□ -0.3
SUMO3P55854 AC078875.1-201ENST00000431907 724 ntBASIC13.18□□□□□ -0.3
SUMO3P55854 GTF2H2C-215ENST00000514162 610 ntTSL 5 BASIC13.18□□□□□ -0.3
SUMO3P55854 SCARNA21-201ENST00000517026 139 ntBASIC13.18□□□□□ -0.3
SUMO3P55854 AC084859.1-201ENST00000533002 670 ntTSL 4 BASIC13.18□□□□□ -0.3
SUMO3P55854 FAM86B1-218ENST00000534520 808 ntTSL 2 BASIC13.18□□□□□ -0.3
SUMO3P55854 AL132709.1-203ENST00000555103 569 ntTSL 4 BASIC13.18□□□□□ -0.3
SUMO3P55854 AC140658.4-201ENST00000561990 352 ntBASIC13.18□□□□□ -0.3
SUMO3P55854 AP003096.1-203ENST00000564469 563 ntTSL 3 BASIC13.18□□□□□ -0.3
SUMO3P55854 ASNA1-205ENST00000611688 1214 ntTSL 5 BASIC13.18□□□□□ -0.3
SUMO3P55854 AL008638.5-201ENST00000623814 1298 ntBASIC13.18□□□□□ -0.3
SUMO3P55854 PCBP2-OT1-201ENST00000634357 590 ntBASIC13.18□□□□□ -0.3
SUMO3P55854 ABBA01031663.1-201ENST00000635630 790 ntBASIC13.18□□□□□ -0.3
SUMO3P55854 TCOF1-202ENST00000377797 5095 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
SUMO3P55854 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
SUMO3P55854 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
SUMO3P55854 CDPF1-203ENST00000404583 1439 ntAPPRIS ALT1 TSL 2 BASIC13.18□□□□□ -0.3
SUMO3P55854 SHCBP1-201ENST00000303383 3461 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SUMO3P55854 ZNF655-201ENST00000252713 2535 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
SUMO3P55854 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SUMO3P55854 GRK6P1-201ENST00000400595 1711 ntBASIC13.18□□□□□ -0.3
SUMO3P55854 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SUMO3P55854 PEX5L-215ENST00000485199 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
SUMO3P55854 GMEB1-202ENST00000361872 1894 ntAPPRIS ALT1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SUMO3P55854 SGCE-202ENST00000415788 1871 ntTSL 2 BASIC13.18□□□□□ -0.3
SUMO3P55854 GABPA-202ENST00000400075 4814 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SUMO3P55854 LINC02396-202ENST00000550636 2324 ntTSL 2 BASIC13.18□□□□□ -0.3
SUMO3P55854 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC13.18□□□□□ -0.3
SUMO3P55854 NAA60-203ENST00000414063 2619 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
SUMO3P55854 ID2-203ENST00000396290 1362 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SUMO3P55854 BAIAP3-202ENST00000397488 4583 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
SUMO3P55854 HECW1-203ENST00000453890 5169 ntAPPRIS ALT2 TSL 2 BASIC13.18□□□□□ -0.3
SUMO3P55854 EVA1A-202ENST00000393913 1802 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
SUMO3P55854 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC13.18□□□□□ -0.3
SUMO3P55854 CEP164-201ENST00000278935 5630 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
SUMO3P55854 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SUMO3P55854 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
SUMO3P55854 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC13.18□□□□□ -0.3
SUMO3P55854 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
SUMO3P55854 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
SUMO3P55854 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC13.18□□□□□ -0.3
SUMO3P55854 UMODL1-203ENST00000400424 5516 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
SUMO3P55854 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC13.17□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 55.6 ms