Protein–RNA interactions for Protein: P55290

CDH13, Cadherin-13, humanhuman

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13P55290 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CDH13P55290 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
CDH13P55290 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CDH13P55290 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
CDH13P55290 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
CDH13P55290 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
CDH13P55290 ACTG1P3-201ENST00000431775 1114 ntBASIC14.34□□□□□ -0.11
CDH13P55290 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CDH13P55290 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
CDH13P55290 ETV4-203ENST00000538265 2147 ntTSL 2 BASIC14.34□□□□□ -0.11
CDH13P55290 PTP4A1P2-201ENST00000546033 454 ntBASIC14.34□□□□□ -0.11
CDH13P55290 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CDH13P55290 SORD2P-201ENST00000558556 1069 ntBASIC14.34□□□□□ -0.11
CDH13P55290 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC14.34□□□□□ -0.11
CDH13P55290 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CDH13P55290 MIR5189-201ENST00000577370 114 ntBASIC14.34□□□□□ -0.11
CDH13P55290 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC14.34□□□□□ -0.11
CDH13P55290 RFX2-222ENST00000592546 2578 ntAPPRIS ALT1 TSL 2 BASIC14.34□□□□□ -0.11
CDH13P55290 SMAD2-212ENST00000591214 1714 ntTSL 2 BASIC14.34□□□□□ -0.11
CDH13P55290 CICP17-201ENST00000418553 2377 ntBASIC14.34□□□□□ -0.11
CDH13P55290 GPAT4-201ENST00000396987 6298 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CDH13P55290 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
CDH13P55290 RMDN1-201ENST00000406452 3063 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CDH13P55290 GMCL1-201ENST00000282570 4191 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CDH13P55290 ESPN-201ENST00000377828 3531 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
CDH13P55290 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
CDH13P55290 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CDH13P55290 EBP-205ENST00000495186 1775 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CDH13P55290 FBXO3-203ENST00000526785 5798 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CDH13P55290 LINC01305-201ENST00000420866 3123 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CDH13P55290 AC107918.4-201ENST00000641966 3141 ntBASIC14.34□□□□□ -0.11
CDH13P55290 PLPPR1-201ENST00000374874 2495 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CDH13P55290 ANO10-205ENST00000414522 2450 ntTSL 2 BASIC14.34□□□□□ -0.11
CDH13P55290 HSD17B4-222ENST00000515320 2494 ntTSL 2 BASIC14.34□□□□□ -0.11
CDH13P55290 PLXNB1-204ENST00000456774 5859 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
CDH13P55290 AL157996.1-201ENST00000624684 2299 ntBASIC14.34□□□□□ -0.11
CDH13P55290 ARHGEF10-207ENST00000520359 5472 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
CDH13P55290 DDC-213ENST00000617822 1809 ntTSL 3 BASIC14.34□□□□□ -0.11
CDH13P55290 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CDH13P55290 SYNGR1-203ENST00000328933 4391 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CDH13P55290 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
CDH13P55290 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC14.33□□□□□ -0.11
CDH13P55290 ELOA2-202ENST00000620522 1641 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.11
CDH13P55290 PARP3-203ENST00000431474 2360 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.11
CDH13P55290 HIST3H2BB-201ENST00000620438 2364 ntAPPRIS P1 BASIC14.33□□□□□ -0.11
CDH13P55290 AL358216.1-201ENST00000451601 1657 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
CDH13P55290 SLFNL1-204ENST00000372613 2654 ntTSL 2 BASIC14.33□□□□□ -0.12
CDH13P55290 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CDH13P55290 GPER1-203ENST00000397092 2971 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
CDH13P55290 MINDY2-203ENST00000559228 9238 ntAPPRIS P3 TSL 2 BASIC14.33□□□□□ -0.12
CDH13P55290 RAB11FIP1-201ENST00000287263 6253 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CDH13P55290 AC090643.2-201ENST00000623442 2029 ntBASIC14.33□□□□□ -0.12
CDH13P55290 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC14.33□□□□□ -0.12
CDH13P55290 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC14.33□□□□□ -0.12
CDH13P55290 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CDH13P55290 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CDH13P55290 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC14.33□□□□□ -0.12
CDH13P55290 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC14.33□□□□□ -0.12
CDH13P55290 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC14.33□□□□□ -0.12
CDH13P55290 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC14.33□□□□□ -0.12
CDH13P55290 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC14.33□□□□□ -0.12
CDH13P55290 AC106760.1-201ENST00000508690 800 ntBASIC14.33□□□□□ -0.12
CDH13P55290 AC068587.3-201ENST00000526613 355 ntBASIC14.33□□□□□ -0.12
CDH13P55290 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC14.33□□□□□ -0.12
CDH13P55290 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC14.33□□□□□ -0.12
CDH13P55290 MIR4745-201ENST00000577608 62 ntBASIC14.33□□□□□ -0.12
CDH13P55290 RN7SL48P-201ENST00000579283 293 ntBASIC14.33□□□□□ -0.12
CDH13P55290 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC14.33□□□□□ -0.12
CDH13P55290 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC14.33□□□□□ -0.12
CDH13P55290 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CDH13P55290 AC010319.3-201ENST00000597028 470 ntBASIC14.33□□□□□ -0.12
CDH13P55290 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
CDH13P55290 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC14.33□□□□□ -0.12
CDH13P55290 CHD1L-211ENST00000639534 1144 ntTSL 5 BASIC14.33□□□□□ -0.12
CDH13P55290 NR3C1-201ENST00000231509 3556 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CDH13P55290 OPRL1-201ENST00000336866 3321 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
CDH13P55290 ADGRB2-205ENST00000398547 4857 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
CDH13P55290 AL669831.1-201ENST00000506640 6432 ntTSL 5 BASIC14.33□□□□□ -0.12
CDH13P55290 TAF6-205ENST00000437822 2318 ntTSL 2 BASIC14.33□□□□□ -0.12
CDH13P55290 FAM86B1-203ENST00000448228 2096 ntAPPRIS P2 TSL 5 BASIC14.33□□□□□ -0.12
CDH13P55290 NEAT1-201ENST00000499732 1811 ntTSL 2 BASIC14.33□□□□□ -0.12
CDH13P55290 AC022028.2-201ENST00000474115 2619 ntTSL 2 BASIC14.33□□□□□ -0.12
CDH13P55290 AL590440.2-201ENST00000641973 1595 ntBASIC14.33□□□□□ -0.12
CDH13P55290 ZNF362-201ENST00000373428 2936 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CDH13P55290 DNM1P51-202ENST00000558801 8752 ntTSL 5 BASIC14.33□□□□□ -0.12
CDH13P55290 PKD1P6-NPIPP1-202ENST00000605794 2902 ntTSL 2 BASIC14.33□□□□□ -0.12
CDH13P55290 POMK-201ENST00000331373 1865 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
CDH13P55290 EVC2-201ENST00000310917 4828 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
CDH13P55290 TNFRSF11A-201ENST00000269485 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
CDH13P55290 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CDH13P55290 RAP1GAP-211ENST00000495204 2489 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
CDH13P55290 UBTF-205ENST00000526094 2459 ntTSL 5 BASIC14.33□□□□□ -0.12
CDH13P55290 MMAB-210ENST00000545712 4438 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CDH13P55290 PRKCSH-212ENST00000591462 2209 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
CDH13P55290 RAB37-216ENST00000613645 1653 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CDH13P55290 ABCG2-201ENST00000237612 4479 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CDH13P55290 RNF14-201ENST00000347642 4213 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
CDH13P55290 UBA5-202ENST00000356232 3705 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CDH13P55290 TIGD6-201ENST00000296736 4006 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CDH13P55290 SEMA4B-201ENST00000332496 3781 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 148 ms