Protein–RNA interactions for Protein: P55283

CDH4, Cadherin-4, humanhuman

Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4P55283 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CDH4P55283 OPN4-202ENST00000372071 2401 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CDH4P55283 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC14.88□□□□□ -0.03
CDH4P55283 NCKAP5L-201ENST00000335999 4900 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
CDH4P55283 CLCNKA-201ENST00000331433 2475 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
CDH4P55283 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC14.88□□□□□ -0.03
CDH4P55283 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CDH4P55283 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC14.88□□□□□ -0.03
CDH4P55283 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CDH4P55283 LAP3P2-201ENST00000454686 1454 ntBASIC14.88□□□□□ -0.03
CDH4P55283 FGGY-203ENST00000371212 1640 ntTSL 2 BASIC14.88□□□□□ -0.03
CDH4P55283 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CDH4P55283 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
CDH4P55283 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
CDH4P55283 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC14.87□□□□□ -0.03
CDH4P55283 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CDH4P55283 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CDH4P55283 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CDH4P55283 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CDH4P55283 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
CDH4P55283 AC015656.1-201ENST00000624209 3578 ntBASIC14.87□□□□□ -0.03
CDH4P55283 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
CDH4P55283 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC14.87□□□□□ -0.03
CDH4P55283 ST7L-202ENST00000358039 4528 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CDH4P55283 LAP3-210ENST00000606142 1876 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CDH4P55283 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CDH4P55283 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC14.87□□□□□ -0.03
CDH4P55283 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CDH4P55283 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
CDH4P55283 ANXA6-202ENST00000377751 1430 ntTSL 2 BASIC14.87□□□□□ -0.03
CDH4P55283 ARF5-201ENST00000000233 1103 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CDH4P55283 RAB36-202ENST00000341989 936 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CDH4P55283 CRYBA4-201ENST00000354760 811 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CDH4P55283 FCGR1B-203ENST00000369384 1044 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CDH4P55283 BLCAP-204ENST00000397135 685 ntAPPRIS P1 TSL 4 BASIC14.87□□□□□ -0.03
CDH4P55283 MEMO1-204ENST00000407893 682 ntTSL 5 BASIC14.87□□□□□ -0.03
CDH4P55283 CYP46A4P-201ENST00000414953 267 ntBASIC14.87□□□□□ -0.03
CDH4P55283 LINC01352-201ENST00000431347 962 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CDH4P55283 AC093484.1-201ENST00000441875 477 ntTSL 5 BASIC14.87□□□□□ -0.03
CDH4P55283 SPTLC1P5-201ENST00000450718 252 ntBASIC14.87□□□□□ -0.03
CDH4P55283 AC082651.1-201ENST00000478468 832 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CDH4P55283 HMGCLL1-208ENST00000508459 884 ntTSL 2 BASIC14.87□□□□□ -0.03
CDH4P55283 ADM-202ENST00000524948 584 ntTSL 2 BASIC14.87□□□□□ -0.03
CDH4P55283 CNGA4-202ENST00000533426 936 ntTSL 2 BASIC14.87□□□□□ -0.03
CDH4P55283 ANP32A-210ENST00000560303 724 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
CDH4P55283 AC009065.3-201ENST00000562027 627 ntTSL 5 BASIC14.87□□□□□ -0.03
CDH4P55283 FAM236A-201ENST00000593662 453 ntAPPRIS ALT2 TSL 2 BASIC14.87□□□□□ -0.03
CDH4P55283 FAM236B-201ENST00000596535 465 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
CDH4P55283 AC090386.2-201ENST00000623010 1039 ntBASIC14.87□□□□□ -0.03
CDH4P55283 ADH5-213ENST00000626055 1299 ntTSL 5 BASIC14.87□□□□□ -0.03
CDH4P55283 AC009975.2-202ENST00000634539 854 ntTSL 5 BASIC14.87□□□□□ -0.03
CDH4P55283 TSC2-203ENST00000382538 5264 ntAPPRIS ALT2 TSL 2 BASIC14.87□□□□□ -0.03
CDH4P55283 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC14.87□□□□□ -0.03
CDH4P55283 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
CDH4P55283 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC14.87□□□□□ -0.03
CDH4P55283 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC14.87□□□□□ -0.03
CDH4P55283 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CDH4P55283 KRT8P21-201ENST00000430398 1491 ntBASIC14.87□□□□□ -0.03
CDH4P55283 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CDH4P55283 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CDH4P55283 AC011899.2-202ENST00000438047 4302 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CDH4P55283 AC097376.2-205ENST00000610159 5334 ntBASIC14.87□□□□□ -0.03
CDH4P55283 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC14.87□□□□□ -0.03
CDH4P55283 KCNN3-202ENST00000358505 1658 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CDH4P55283 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
CDH4P55283 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
CDH4P55283 NCBP2-206ENST00000447325 2216 ntTSL 2 BASIC14.86□□□□□ -0.03
CDH4P55283 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CDH4P55283 FBXL21-202ENST00000467490 1742 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CDH4P55283 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CDH4P55283 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
CDH4P55283 ELL-201ENST00000262809 4027 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CDH4P55283 AC082651.3-201ENST00000474667 1947 ntTSL 2 BASIC14.86□□□□□ -0.03
CDH4P55283 BX640514.1-201ENST00000583223 1918 ntBASIC14.86□□□□□ -0.03
CDH4P55283 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
CDH4P55283 RALGPS2-204ENST00000367635 5834 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CDH4P55283 ZNF516-201ENST00000443185 8118 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CDH4P55283 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC14.86□□□□□ -0.03
CDH4P55283 SNRPN-203ENST00000400097 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CDH4P55283 PCBP2-215ENST00000549863 1619 ntTSL 5 BASIC14.86□□□□□ -0.03
CDH4P55283 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CDH4P55283 ABHD4-201ENST00000216327 716 ntTSL 5 BASIC14.86□□□□□ -0.03
CDH4P55283 NPFF-201ENST00000267017 592 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CDH4P55283 EDF1-202ENST00000371648 809 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CDH4P55283 NME6-203ENST00000415644 849 ntTSL 2 BASIC14.86□□□□□ -0.03
CDH4P55283 AL357558.1-201ENST00000416646 456 ntTSL 2 BASIC14.86□□□□□ -0.03
CDH4P55283 KRTAP19-9P-201ENST00000421795 191 ntBASIC14.86□□□□□ -0.03
CDH4P55283 RNF144A-AS1-203ENST00000426122 579 ntTSL 4 BASIC14.86□□□□□ -0.03
CDH4P55283 FKBP11-202ENST00000444214 630 ntTSL 2 BASIC14.86□□□□□ -0.03
CDH4P55283 AC239802.2-201ENST00000532137 554 ntTSL 4 BASIC14.86□□□□□ -0.03
CDH4P55283 RERG-205ENST00000537647 935 ntTSL 2 BASIC14.86□□□□□ -0.03
CDH4P55283 MSRB3-209ENST00000540804 884 ntTSL 2 BASIC14.86□□□□□ -0.03
CDH4P55283 AL356756.1-201ENST00000550941 551 ntTSL 3 BASIC14.86□□□□□ -0.03
CDH4P55283 AP005264.1-201ENST00000586226 733 ntTSL 3 BASIC14.86□□□□□ -0.03
CDH4P55283 PYY-202ENST00000592796 580 ntAPPRIS ALT1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CDH4P55283 AC063977.3-201ENST00000597569 547 ntTSL 4 BASIC14.86□□□□□ -0.03
CDH4P55283 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CDH4P55283 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CDH4P55283 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC14.86□□□□□ -0.03
CDH4P55283 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 57.6 ms