Protein–RNA interactions for Protein: P54277

PMS1, PMS1 protein homolog 1, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1P54277 ZNF720-210ENST00000534369 791 ntTSL 3 BASIC16.06■□□□□ 0.16
PMS1P54277 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC16.06■□□□□ 0.16
PMS1P54277 EML4-203ENST00000402711 3568 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
PMS1P54277 AGO3-201ENST00000246314 3211 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
PMS1P54277 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
PMS1P54277 RFX2-222ENST00000592546 2578 ntAPPRIS ALT1 TSL 2 BASIC16.06■□□□□ 0.16
PMS1P54277 PARP3-203ENST00000431474 2360 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
PMS1P54277 RNF183-206ENST00000478815 2312 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
PMS1P54277 AP3M2-201ENST00000174653 3661 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
PMS1P54277 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
PMS1P54277 PCMTD2-204ENST00000369758 3212 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
PMS1P54277 NBAT1-201ENST00000566912 1940 ntTSL 2 BASIC16.06■□□□□ 0.16
PMS1P54277 LIG1-202ENST00000427526 3027 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
PMS1P54277 FANCA-213ENST00000563673 1694 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
PMS1P54277 SLFNL1-204ENST00000372613 2654 ntTSL 2 BASIC16.05■□□□□ 0.16
PMS1P54277 MRVI1-204ENST00000527509 2686 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
PMS1P54277 RCC1-201ENST00000373831 1577 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
PMS1P54277 MARVELD2-203ENST00000436532 1563 ntTSL 5 BASIC16.05■□□□□ 0.16
PMS1P54277 FBXO8-202ENST00000503293 1546 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
PMS1P54277 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC16.05■□□□□ 0.16
PMS1P54277 ZNF100-201ENST00000305570 2283 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
PMS1P54277 TGOLN2-204ENST00000409015 2276 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
PMS1P54277 PFDN5-202ENST00000334478 586 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PMS1P54277 CSAG1-202ENST00000370287 875 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
PMS1P54277 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC16.05■□□□□ 0.16
PMS1P54277 MRPL23-204ENST00000397297 613 ntTSL 2 BASIC16.05■□□□□ 0.16
PMS1P54277 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC16.05■□□□□ 0.16
PMS1P54277 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC16.05■□□□□ 0.16
PMS1P54277 CNN2P10-201ENST00000443067 918 ntBASIC16.05■□□□□ 0.16
PMS1P54277 HIST2H2BB-201ENST00000449108 381 ntBASIC16.05■□□□□ 0.16
PMS1P54277 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC16.05■□□□□ 0.16
PMS1P54277 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC16.05■□□□□ 0.16
PMS1P54277 AP000812.2-201ENST00000538934 718 ntBASIC16.05■□□□□ 0.16
PMS1P54277 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC16.05■□□□□ 0.16
PMS1P54277 AC145343.1-201ENST00000579629 650 ntTSL 3 BASIC16.05■□□□□ 0.16
PMS1P54277 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC16.05■□□□□ 0.16
PMS1P54277 AC105233.6-201ENST00000642093 218 ntBASIC16.05■□□□□ 0.16
PMS1P54277 TPM3P9-201ENST00000424846 2920 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
PMS1P54277 SVIL-AS1-204ENST00000427063 2025 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
PMS1P54277 FAAP100-201ENST00000327787 3627 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PMS1P54277 ERC1-219ENST00000546231 4390 ntTSL 5 BASIC16.05■□□□□ 0.16
PMS1P54277 EPN2-210ENST00000571254 1883 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
PMS1P54277 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PMS1P54277 AC027288.3-202ENST00000550268 1820 ntTSL 2 BASIC16.05■□□□□ 0.16
PMS1P54277 CHRNA3-201ENST00000326828 3202 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PMS1P54277 XKR9-203ENST00000520030 1799 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PMS1P54277 TUNAR-201ENST00000503525 3197 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PMS1P54277 SHC1P1-201ENST00000425230 1745 ntBASIC16.05■□□□□ 0.16
PMS1P54277 LRSAM1-204ENST00000373324 3044 ntTSL 2 BASIC16.05■□□□□ 0.16
PMS1P54277 ABCC6P1-201ENST00000546162 2943 ntTSL 2 BASIC16.05■□□□□ 0.16
PMS1P54277 YWHAQ-201ENST00000238081 2208 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PMS1P54277 AL162231.1-201ENST00000421828 1525 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
PMS1P54277 SPTLC2-201ENST00000216484 8170 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PMS1P54277 ANKMY1-208ENST00000405002 3304 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
PMS1P54277 MED15-204ENST00000406969 3210 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
PMS1P54277 ATG13-215ENST00000529655 2566 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
PMS1P54277 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PMS1P54277 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
PMS1P54277 MFSD11-211ENST00000588460 3612 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
PMS1P54277 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
PMS1P54277 SIRT2-202ENST00000358931 1912 ntTSL 5 BASIC16.04■□□□□ 0.16
PMS1P54277 CFAP52-202ENST00000396219 1912 ntTSL 2 BASIC16.04■□□□□ 0.16
PMS1P54277 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC16.04■□□□□ 0.16
PMS1P54277 PLCD1-204ENST00000463876 2963 ntAPPRIS ALT1 TSL 2 BASIC16.04■□□□□ 0.16
PMS1P54277 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
PMS1P54277 HIST3H2BB-201ENST00000620438 2364 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
PMS1P54277 HSDL2-202ENST00000398805 3350 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PMS1P54277 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PMS1P54277 ACSL1-201ENST00000281455 3832 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
PMS1P54277 LBX2-201ENST00000341396 886 ntTSL 3 BASIC16.04■□□□□ 0.16
PMS1P54277 MIR326-201ENST00000362220 95 ntBASIC16.04■□□□□ 0.16
PMS1P54277 DUSP23-202ENST00000368108 694 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PMS1P54277 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
PMS1P54277 AL354893.2-201ENST00000423075 529 ntTSL 5 BASIC16.04■□□□□ 0.16
PMS1P54277 AC026954.1-201ENST00000429771 1293 ntBASIC16.04■□□□□ 0.16
PMS1P54277 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC16.04■□□□□ 0.16
PMS1P54277 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
PMS1P54277 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
PMS1P54277 AHRR-211ENST00000515206 462 ntTSL 5 BASIC16.04■□□□□ 0.16
PMS1P54277 IGHVIII-5-2-201ENST00000522505 261 ntBASIC16.04■□□□□ 0.16
PMS1P54277 MANEAL-204ENST00000525897 1294 ntTSL 2 BASIC16.04■□□□□ 0.16
PMS1P54277 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC16.04■□□□□ 0.16
PMS1P54277 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC16.04■□□□□ 0.16
PMS1P54277 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC16.04■□□□□ 0.16
PMS1P54277 AC005586.2-201ENST00000563946 837 ntBASIC16.04■□□□□ 0.16
PMS1P54277 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC16.04■□□□□ 0.16
PMS1P54277 ORC6-206ENST00000568364 888 ntTSL 5 BASIC16.04■□□□□ 0.16
PMS1P54277 ZACNP1-201ENST00000612259 710 ntBASIC16.04■□□□□ 0.16
PMS1P54277 AL136301.1-201ENST00000615830 422 ntBASIC16.04■□□□□ 0.16
PMS1P54277 CYP1B1-AS1-221ENST00000627172 995 ntTSL 5 BASIC16.04■□□□□ 0.16
PMS1P54277 PRDM4-201ENST00000228437 4210 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
PMS1P54277 OPA1-204ENST00000361828 6381 ntAPPRIS ALT1 TSL 5 BASIC16.04■□□□□ 0.16
PMS1P54277 NFATC4-207ENST00000553469 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
PMS1P54277 FAM213A-203ENST00000372187 1647 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PMS1P54277 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PMS1P54277 SEZ6L-206ENST00000404234 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
PMS1P54277 TLE1-203ENST00000376499 3893 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PMS1P54277 FAM124B-201ENST00000243806 2030 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
PMS1P54277 CDK3-201ENST00000425876 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PMS1P54277 CDK3-202ENST00000448471 1570 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 126.5 ms