Protein–RNA interactions for Protein: P49458

SRP9, Signal recognition particle 9 kDa protein, humanhuman

Known RBP Predictions only

Length 86 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP9P49458 RNF216-202ENST00000389902 3293 ntAPPRIS P4 TSL 1 (best) BASIC13.07□□□□□ -0.32
SRP9P49458 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC13.07□□□□□ -0.32
SRP9P49458 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC13.07□□□□□ -0.32
SRP9P49458 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC13.07□□□□□ -0.32
SRP9P49458 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
SRP9P49458 NUP98-204ENST00000397004 3923 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
SRP9P49458 RPS6KC1-208ENST00000614059 4188 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
SRP9P49458 CAND2-201ENST00000295989 4429 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
SRP9P49458 ATCAY-201ENST00000450849 5070 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
SRP9P49458 MOB3C-203ENST00000371940 5725 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
SRP9P49458 C7orf65-201ENST00000408988 2911 ntTSL 2 BASIC13.06□□□□□ -0.32
SRP9P49458 LMX1B-202ENST00000373474 5797 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
SRP9P49458 LINC01792-201ENST00000452787 2050 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
SRP9P49458 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
SRP9P49458 ADAM17-204ENST00000618923 1881 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
SRP9P49458 INE2-201ENST00000630399 1874 ntBASIC13.06□□□□□ -0.32
SRP9P49458 ANKRD20A19P-202ENST00000442969 2796 ntTSL 2 BASIC13.06□□□□□ -0.32
SRP9P49458 C19orf66-202ENST00000397881 2140 ntAPPRIS ALT2 TSL 2 BASIC13.06□□□□□ -0.32
SRP9P49458 AC015712.6-201ENST00000431060 5068 ntTSL 2 BASIC13.06□□□□□ -0.32
SRP9P49458 AP1G2-201ENST00000308724 3298 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
SRP9P49458 DDX31-202ENST00000372153 3285 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
SRP9P49458 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
SRP9P49458 IL3RA-201ENST00000331035 1706 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
SRP9P49458 ABCA2-203ENST00000371605 8151 ntAPPRIS ALT2 TSL 2 BASIC13.06□□□□□ -0.32
SRP9P49458 PLXNB1-204ENST00000456774 5859 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
SRP9P49458 AC004241.5-201ENST00000623870 2448 ntBASIC13.06□□□□□ -0.32
SRP9P49458 PCM1-201ENST00000325083 6820 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
SRP9P49458 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
SRP9P49458 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
SRP9P49458 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
SRP9P49458 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
SRP9P49458 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
SRP9P49458 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
SRP9P49458 APOA1-205ENST00000375329 927 ntTSL 2 BASIC13.06□□□□□ -0.32
SRP9P49458 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
SRP9P49458 PTPA-220ENST00000436883 532 ntTSL 4 BASIC13.06□□□□□ -0.32
SRP9P49458 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC13.06□□□□□ -0.32
SRP9P49458 GUSBP11-206ENST00000455485 3816 ntTSL 2 BASIC13.06□□□□□ -0.32
SRP9P49458 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
SRP9P49458 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC13.06□□□□□ -0.32
SRP9P49458 AP001582.1-201ENST00000525856 295 ntBASIC13.06□□□□□ -0.32
SRP9P49458 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC13.06□□□□□ -0.32
SRP9P49458 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC13.06□□□□□ -0.32
SRP9P49458 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC13.06□□□□□ -0.32
SRP9P49458 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC13.06□□□□□ -0.32
SRP9P49458 LINC02084-201ENST00000606069 1096 ntBASIC13.06□□□□□ -0.32
SRP9P49458 CECR7-204ENST00000609932 568 ntTSL 2 BASIC13.06□□□□□ -0.32
SRP9P49458 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC13.06□□□□□ -0.32
SRP9P49458 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC13.06□□□□□ -0.32
SRP9P49458 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
SRP9P49458 GABRB3-219ENST00000636466 4509 ntTSL 5 BASIC13.06□□□□□ -0.32
SRP9P49458 PIGT-203ENST00000372689 1971 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
SRP9P49458 KCNV1-201ENST00000297404 2927 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
SRP9P49458 ARAP3-201ENST00000239440 5250 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
SRP9P49458 AATBC-201ENST00000400385 4598 ntTSL 2 BASIC13.06□□□□□ -0.32
SRP9P49458 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
SRP9P49458 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
SRP9P49458 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
SRP9P49458 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
SRP9P49458 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
SRP9P49458 GIPR-205ENST00000590918 3289 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
SRP9P49458 SNCAIP-203ENST00000379538 2588 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
SRP9P49458 HSD17B4-215ENST00000510025 2589 ntTSL 2 BASIC13.06□□□□□ -0.32
SRP9P49458 GJB4-201ENST00000339480 2840 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
SRP9P49458 PVR-205ENST00000425690 3325 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
SRP9P49458 WIZ-202ENST00000389282 4067 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
SRP9P49458 ANK1-202ENST00000289734 8297 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
SRP9P49458 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC13.06□□□□□ -0.32
SRP9P49458 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
SRP9P49458 ALAS1-204ENST00000469224 2125 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
SRP9P49458 KLHL21-201ENST00000377658 4487 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
SRP9P49458 AC023794.5-201ENST00000564380 2157 ntBASIC13.05□□□□□ -0.32
SRP9P49458 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC13.05□□□□□ -0.32
SRP9P49458 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
SRP9P49458 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
SRP9P49458 PCDHB16-201ENST00000609684 5001 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
SRP9P49458 CU639417.3-201ENST00000624240 1404 ntBASIC13.05□□□□□ -0.32
SRP9P49458 UQCC1-204ENST00000374384 2201 ntTSL 2 BASIC13.05□□□□□ -0.32
SRP9P49458 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC13.05□□□□□ -0.32
SRP9P49458 RMDN1-201ENST00000406452 3063 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
SRP9P49458 CLCN7-203ENST00000448525 4151 ntTSL 2 BASIC13.05□□□□□ -0.32
SRP9P49458 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
SRP9P49458 AC131212.3-201ENST00000624087 4219 ntBASIC13.05□□□□□ -0.32
SRP9P49458 ZKSCAN2-201ENST00000328086 7523 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
SRP9P49458 HACD2-201ENST00000383657 4257 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
SRP9P49458 ABCC6P1-201ENST00000546162 2943 ntTSL 2 BASIC13.05□□□□□ -0.32
SRP9P49458 AC011899.2-202ENST00000438047 4302 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
SRP9P49458 AC090505.1-201ENST00000430515 1834 ntBASIC13.05□□□□□ -0.32
SRP9P49458 AP001062.1-201ENST00000448927 4354 ntTSL 2 BASIC13.05□□□□□ -0.32
SRP9P49458 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC13.05□□□□□ -0.32
SRP9P49458 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
SRP9P49458 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
SRP9P49458 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
SRP9P49458 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
SRP9P49458 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
SRP9P49458 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC13.05□□□□□ -0.32
SRP9P49458 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC13.05□□□□□ -0.32
SRP9P49458 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
SRP9P49458 GLI4-203ENST00000517468 963 ntTSL 5 BASIC13.05□□□□□ -0.32
SRP9P49458 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC13.05□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 58.5 ms