Protein–RNA interactions for Protein: P42898

MTHFR, Methylenetetrahydrofolate reductase, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFRP42898 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
MTHFRP42898 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
MTHFRP42898 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
MTHFRP42898 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
MTHFRP42898 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
MTHFRP42898 CTSL-201ENST00000340342 1436 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
MTHFRP42898 LINC01815-202ENST00000641468 1409 ntBASIC15.26■□□□□ 0.03
MTHFRP42898 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC15.26■□□□□ 0.03
MTHFRP42898 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
MTHFRP42898 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
MTHFRP42898 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
MTHFRP42898 METTL7B-202ENST00000614691 1368 ntTSL 5 BASIC15.25■□□□□ 0.03
MTHFRP42898 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
MTHFRP42898 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
MTHFRP42898 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.03
MTHFRP42898 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
MTHFRP42898 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
MTHFRP42898 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
MTHFRP42898 THUMPD3-AS1-212ENST00000520447 1809 ntTSL 5 BASIC15.25■□□□□ 0.03
MTHFRP42898 AC007292.2-201ENST00000593524 1812 ntBASIC15.25■□□□□ 0.03
MTHFRP42898 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
MTHFRP42898 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
MTHFRP42898 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC15.25■□□□□ 0.03
MTHFRP42898 DCAF7-201ENST00000415273 1220 ntTSL 2 BASIC15.25■□□□□ 0.03
MTHFRP42898 AC092265.1-201ENST00000422638 498 ntTSL 2 BASIC15.25■□□□□ 0.03
MTHFRP42898 BCAS2P2-201ENST00000425064 674 ntBASIC15.25■□□□□ 0.03
MTHFRP42898 AC004837.1-201ENST00000446267 564 ntBASIC15.25■□□□□ 0.03
MTHFRP42898 AREG-202ENST00000502307 956 ntTSL 5 BASIC15.25■□□□□ 0.03
MTHFRP42898 AC105254.1-201ENST00000507782 621 ntTSL 4 BASIC15.25■□□□□ 0.03
MTHFRP42898 AP000911.2-201ENST00000534330 502 ntBASIC15.25■□□□□ 0.03
MTHFRP42898 EMP2-203ENST00000536829 781 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
MTHFRP42898 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC15.25■□□□□ 0.03
MTHFRP42898 AL356756.1-201ENST00000550941 551 ntTSL 3 BASIC15.25■□□□□ 0.03
MTHFRP42898 TTC28-AS1_3.1-201ENST00000615579 181 ntBASIC15.25■□□□□ 0.03
MTHFRP42898 AC138466.5-201ENST00000624002 808 ntBASIC15.25■□□□□ 0.03
MTHFRP42898 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
MTHFRP42898 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
MTHFRP42898 XKR9-203ENST00000520030 1799 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
MTHFRP42898 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.03
MTHFRP42898 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC15.25■□□□□ 0.03
MTHFRP42898 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
MTHFRP42898 ELOVL1-201ENST00000372458 1477 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
MTHFRP42898 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.03
MTHFRP42898 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
MTHFRP42898 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
MTHFRP42898 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC15.25■□□□□ 0.03
MTHFRP42898 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
MTHFRP42898 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
MTHFRP42898 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
MTHFRP42898 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
MTHFRP42898 ELP5-203ENST00000396627 1389 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
MTHFRP42898 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
MTHFRP42898 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
MTHFRP42898 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC15.24■□□□□ 0.03
MTHFRP42898 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
MTHFRP42898 RASGEF1B-202ENST00000335927 1756 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
MTHFRP42898 RGS6-217ENST00000555571 1764 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
MTHFRP42898 IL1RAP-209ENST00000422940 1957 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
MTHFRP42898 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
MTHFRP42898 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
MTHFRP42898 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
MTHFRP42898 DEFB123-201ENST00000376309 467 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
MTHFRP42898 SAPCD1-208ENST00000415669 916 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
MTHFRP42898 AC096649.1-201ENST00000449168 497 ntTSL 3 BASIC15.24■□□□□ 0.03
MTHFRP42898 AC010234.1-201ENST00000494599 870 ntBASIC15.24■□□□□ 0.03
MTHFRP42898 AC129102.1-201ENST00000535755 525 ntTSL 4 BASIC15.24■□□□□ 0.03
MTHFRP42898 AC003686.1-201ENST00000550956 1034 ntBASIC15.24■□□□□ 0.03
MTHFRP42898 AC138701.2-201ENST00000553634 226 ntBASIC15.24■□□□□ 0.03
MTHFRP42898 AL022344.2-201ENST00000568976 968 ntBASIC15.24■□□□□ 0.03
MTHFRP42898 AC011481.2-201ENST00000585408 426 ntTSL 3 BASIC15.24■□□□□ 0.03
MTHFRP42898 DBP-202ENST00000593500 712 ntTSL 2 BASIC15.24■□□□□ 0.03
MTHFRP42898 AP000322.3-201ENST00000608665 388 ntBASIC15.24■□□□□ 0.03
MTHFRP42898 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
MTHFRP42898 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC15.24■□□□□ 0.03
MTHFRP42898 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
MTHFRP42898 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
MTHFRP42898 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
MTHFRP42898 Z84468.1-201ENST00000626321 1408 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
MTHFRP42898 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
MTHFRP42898 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
MTHFRP42898 AL161772.1-201ENST00000610494 4412 ntBASIC15.24■□□□□ 0.03
MTHFRP42898 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
MTHFRP42898 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
MTHFRP42898 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC15.24■□□□□ 0.03
MTHFRP42898 AC090616.6-203ENST00000579186 1945 ntBASIC15.23■□□□□ 0.03
MTHFRP42898 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
MTHFRP42898 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC15.23■□□□□ 0.03
MTHFRP42898 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC15.23■□□□□ 0.03
MTHFRP42898 NOX5-209ENST00000530406 2289 ntAPPRIS P4 TSL 1 (best) BASIC15.23■□□□□ 0.03
MTHFRP42898 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
MTHFRP42898 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
MTHFRP42898 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
MTHFRP42898 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
MTHFRP42898 AC087481.3-201ENST00000602886 1894 ntBASIC15.23■□□□□ 0.03
MTHFRP42898 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC15.23■□□□□ 0.03
MTHFRP42898 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC15.23■□□□□ 0.03
MTHFRP42898 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC15.23■□□□□ 0.03
MTHFRP42898 TMEM176B-201ENST00000326442 1129 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
MTHFRP42898 ADARB2-AS1-201ENST00000381301 625 ntTSL 2 BASIC15.23■□□□□ 0.03
MTHFRP42898 CNRIP1-202ENST00000409559 644 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 71.1 ms