Protein–RNA interactions for Protein: P41238

APOBEC1, C->U-editing enzyme APOBEC-1, humanhuman

Known RBP Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC1P41238 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
APOBEC1P41238 COL4A2-AS2-201ENST00000458403 1522 ntTSL 2 BASIC13.22□□□□□ -0.29
APOBEC1P41238 SPO11-203ENST00000371263 1834 ntAPPRIS P4 TSL 1 (best) BASIC13.22□□□□□ -0.29
APOBEC1P41238 CD3EAP-202ENST00000589804 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
APOBEC1P41238 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
APOBEC1P41238 ALDH3A1-201ENST00000225740 1779 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
APOBEC1P41238 ZFP36-203ENST00000597629 1786 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
APOBEC1P41238 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
APOBEC1P41238 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
APOBEC1P41238 DOK1-202ENST00000340004 1722 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
APOBEC1P41238 GRK6P1-201ENST00000400595 1711 ntBASIC13.22□□□□□ -0.29
APOBEC1P41238 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC13.22□□□□□ -0.29
APOBEC1P41238 SNAP47-203ENST00000366760 1446 ntAPPRIS ALT2 TSL 2 BASIC13.22□□□□□ -0.29
APOBEC1P41238 MKRN2-201ENST00000170447 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
APOBEC1P41238 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
APOBEC1P41238 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC13.21□□□□□ -0.29
APOBEC1P41238 TEX44-201ENST00000313965 1383 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
APOBEC1P41238 UNC13A-202ENST00000519716 9838 ntAPPRIS P2 TSL 5 BASIC13.21□□□□□ -0.29
APOBEC1P41238 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
APOBEC1P41238 NTM-205ENST00000425719 1607 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
APOBEC1P41238 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC13.21□□□□□ -0.29
APOBEC1P41238 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
APOBEC1P41238 RUNX1T1-251ENST00000615601 7372 ntAPPRIS ALT1 TSL 5 BASIC13.21□□□□□ -0.29
APOBEC1P41238 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC13.21□□□□□ -0.29
APOBEC1P41238 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC13.21□□□□□ -0.29
APOBEC1P41238 ANXA9-201ENST00000368947 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
APOBEC1P41238 DAAM2-201ENST00000274867 6194 ntAPPRIS ALT1 TSL 1 (best) BASIC13.21□□□□□ -0.29
APOBEC1P41238 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.29
APOBEC1P41238 EDN2-201ENST00000372587 1241 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
APOBEC1P41238 APOC3-202ENST00000375345 604 ntTSL 5 BASIC13.21□□□□□ -0.29
APOBEC1P41238 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC13.21□□□□□ -0.29
APOBEC1P41238 LIMS1-206ENST00000414829 439 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
APOBEC1P41238 PRKG1-AS1-201ENST00000420193 971 ntTSL 3 BASIC13.21□□□□□ -0.29
APOBEC1P41238 AL645933.1-201ENST00000440087 609 ntBASIC13.21□□□□□ -0.29
APOBEC1P41238 HSPB1P2-201ENST00000448722 546 ntBASIC13.21□□□□□ -0.29
APOBEC1P41238 AL139010.1-202ENST00000452528 1041 ntTSL 2 BASIC13.21□□□□□ -0.29
APOBEC1P41238 TUBB8P8-201ENST00000458717 1058 ntBASIC13.21□□□□□ -0.29
APOBEC1P41238 LIMS3-205ENST00000487150 782 ntTSL 3 BASIC13.21□□□□□ -0.29
APOBEC1P41238 CCDC153-204ENST00000503566 1295 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
APOBEC1P41238 PUDP-206ENST00000540122 825 ntTSL 2 BASIC13.21□□□□□ -0.29
APOBEC1P41238 AL583810.1-201ENST00000553344 1045 ntBASIC13.21□□□□□ -0.29
APOBEC1P41238 AC010491.1-202ENST00000567048 528 ntTSL 2 BASIC13.21□□□□□ -0.29
APOBEC1P41238 RANGRF-205ENST00000580434 749 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
APOBEC1P41238 NAT9-212ENST00000581136 1011 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.29
APOBEC1P41238 ANKS3-227ENST00000592711 580 ntTSL 4 BASIC13.21□□□□□ -0.29
APOBEC1P41238 AL354740.1-203ENST00000593917 424 ntTSL 3 BASIC13.21□□□□□ -0.29
APOBEC1P41238 AC011495.3-201ENST00000596472 427 ntTSL 2 BASIC13.21□□□□□ -0.29
APOBEC1P41238 PLA2G4C-AS1-201ENST00000596552 568 ntTSL 3 BASIC13.21□□□□□ -0.29
APOBEC1P41238 ZNF586-206ENST00000599802 581 ntTSL 3 BASIC13.21□□□□□ -0.29
APOBEC1P41238 DIO1-215ENST00000610607 796 ntTSL 5 BASIC13.21□□□□□ -0.29
APOBEC1P41238 Six3os1_5.1-201ENST00000611000 271 ntBASIC13.21□□□□□ -0.29
APOBEC1P41238 IGHV1OR21-1-201ENST00000622028 353 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
APOBEC1P41238 TMBIM7P-202ENST00000641474 1516 ntBASIC13.21□□□□□ -0.29
APOBEC1P41238 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC13.21□□□□□ -0.29
APOBEC1P41238 ZNF655-201ENST00000252713 2535 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
APOBEC1P41238 FAM47E-STBD1-204ENST00000515604 3029 ntAPPRIS P2 TSL 2 BASIC13.21□□□□□ -0.29
APOBEC1P41238 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
APOBEC1P41238 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
APOBEC1P41238 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
APOBEC1P41238 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.29
APOBEC1P41238 PEX5L-215ENST00000485199 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
APOBEC1P41238 TRIM71-201ENST00000383763 8685 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
APOBEC1P41238 AC027601.5-201ENST00000624065 2482 ntBASIC13.21□□□□□ -0.29
APOBEC1P41238 RCHY1-202ENST00000380840 1735 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
APOBEC1P41238 AC020910.6-201ENST00000623084 1459 ntBASIC13.21□□□□□ -0.3
APOBEC1P41238 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC13.21□□□□□ -0.3
APOBEC1P41238 IGF2BP2-202ENST00000382199 3688 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.3
APOBEC1P41238 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
APOBEC1P41238 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
APOBEC1P41238 LRP5L-202ENST00000402859 1661 ntAPPRIS P2 TSL 5 BASIC13.21□□□□□ -0.3
APOBEC1P41238 MBTD1-201ENST00000376381 1420 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
APOBEC1P41238 FGGY-203ENST00000371212 1640 ntTSL 2 BASIC13.21□□□□□ -0.3
APOBEC1P41238 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
APOBEC1P41238 PDE8B-203ENST00000340978 3426 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
APOBEC1P41238 ELP1-201ENST00000374647 5905 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
APOBEC1P41238 UBXN11-206ENST00000374222 2043 ntAPPRIS P4 TSL 5 BASIC13.2□□□□□ -0.3
APOBEC1P41238 ZBED8-202ENST00000523213 2484 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
APOBEC1P41238 TUBB1P2-201ENST00000422712 1306 ntBASIC13.2□□□□□ -0.3
APOBEC1P41238 TUBB1P1-201ENST00000503144 1300 ntBASIC13.2□□□□□ -0.3
APOBEC1P41238 LINC00327-203ENST00000576696 1308 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
APOBEC1P41238 AL008718.2-201ENST00000609206 1313 ntBASIC13.2□□□□□ -0.3
APOBEC1P41238 ALDOA-203ENST00000395248 2447 ntTSL 5 BASIC13.2□□□□□ -0.3
APOBEC1P41238 NXPH3-202ENST00000513748 1530 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
APOBEC1P41238 PLXNB1-204ENST00000456774 5859 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
APOBEC1P41238 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
APOBEC1P41238 UBE2I-201ENST00000325437 2832 ntAPPRIS P1 TSL 3 BASIC13.2□□□□□ -0.3
APOBEC1P41238 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
APOBEC1P41238 HLA-DPA1-242ENST00000419277 1704 ntAPPRIS P2 BASIC13.2□□□□□ -0.3
APOBEC1P41238 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC13.2□□□□□ -0.3
APOBEC1P41238 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
APOBEC1P41238 SFMBT1-201ENST00000394752 4548 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
APOBEC1P41238 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
APOBEC1P41238 NEU2-201ENST00000233840 1143 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
APOBEC1P41238 KLK1-201ENST00000301420 866 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
APOBEC1P41238 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
APOBEC1P41238 ETV2-201ENST00000379023 926 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
APOBEC1P41238 AL365277.1-206ENST00000417869 487 ntTSL 3 BASIC13.2□□□□□ -0.3
APOBEC1P41238 LINC01665-201ENST00000422917 1241 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
APOBEC1P41238 AP000350.4-201ENST00000433835 788 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
APOBEC1P41238 AL365277.1-204ENST00000450157 599 ntTSL 3 BASIC13.2□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms