Protein–RNA interactions for Protein: P25800

LMO1, Rhombotin-1, humanhuman

Predictions only

Length 156 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO1P25800 PARP3-203ENST00000431474 2360 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
LMO1P25800 ETV4-203ENST00000538265 2147 ntTSL 2 BASIC12.29□□□□□ -0.44
LMO1P25800 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
LMO1P25800 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
LMO1P25800 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
LMO1P25800 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
LMO1P25800 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
LMO1P25800 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
LMO1P25800 RBM26-203ENST00000438737 4132 ntTSL 5 BASIC12.29□□□□□ -0.44
LMO1P25800 AC012531.2-201ENST00000512206 1389 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
LMO1P25800 USP44-203ENST00000537435 2499 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
LMO1P25800 AC010547.4-201ENST00000561754 1378 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
LMO1P25800 TBC1D9B-208ENST00000519746 2755 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
LMO1P25800 ASB3-201ENST00000263634 2214 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
LMO1P25800 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
LMO1P25800 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC12.29□□□□□ -0.44
LMO1P25800 FLOT2-210ENST00000585169 2585 ntAPPRIS ALT1 TSL 5 BASIC12.28□□□□□ -0.44
LMO1P25800 SCUBE2-201ENST00000309263 3727 ntTSL 5 BASIC12.28□□□□□ -0.44
LMO1P25800 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
LMO1P25800 DDX41-208ENST00000507955 2607 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
LMO1P25800 SEPT12-201ENST00000268231 1469 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
LMO1P25800 FAM219A-203ENST00000379080 3591 ntTSL 2 BASIC12.28□□□□□ -0.44
LMO1P25800 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
LMO1P25800 CNTN1-203ENST00000547702 3033 ntTSL 2 BASIC12.28□□□□□ -0.44
LMO1P25800 AC020658.7-201ENST00000624274 2442 ntBASIC12.28□□□□□ -0.44
LMO1P25800 AC012184.2-203ENST00000443119 2110 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
LMO1P25800 NXPH3-202ENST00000513748 1530 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
LMO1P25800 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC12.28□□□□□ -0.44
LMO1P25800 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC12.28□□□□□ -0.44
LMO1P25800 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
LMO1P25800 CAMKV-202ENST00000463537 2818 ntTSL 5 BASIC12.28□□□□□ -0.44
LMO1P25800 SLC26A8-201ENST00000355574 3463 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
LMO1P25800 AGRP-201ENST00000290953 764 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
LMO1P25800 KLK11-201ENST00000319720 1198 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
LMO1P25800 PFDN5-202ENST00000334478 586 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
LMO1P25800 TNFAIP8L2-201ENST00000368910 1178 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
LMO1P25800 AC010141.1-201ENST00000411585 623 ntBASIC12.28□□□□□ -0.44
LMO1P25800 AL391361.3-201ENST00000420601 379 ntTSL 2 BASIC12.28□□□□□ -0.44
LMO1P25800 CHMP1AP1-201ENST00000445563 662 ntBASIC12.28□□□□□ -0.44
LMO1P25800 AL355994.2-201ENST00000447882 704 ntBASIC12.28□□□□□ -0.44
LMO1P25800 CICP12-201ENST00000455801 843 ntBASIC12.28□□□□□ -0.44
LMO1P25800 GPR53P-205ENST00000457298 1084 ntBASIC12.28□□□□□ -0.44
LMO1P25800 NAA50-208ENST00000497255 789 ntTSL 5 BASIC12.28□□□□□ -0.44
LMO1P25800 AHRR-211ENST00000515206 462 ntTSL 5 BASIC12.28□□□□□ -0.44
LMO1P25800 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC12.28□□□□□ -0.44
LMO1P25800 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC12.28□□□□□ -0.44
LMO1P25800 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
LMO1P25800 MIR4683-201ENST00000579659 81 ntBASIC12.28□□□□□ -0.44
LMO1P25800 CLEC11A-202ENST00000599973 1026 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
LMO1P25800 AL358472.3-201ENST00000608147 415 ntBASIC12.28□□□□□ -0.44
LMO1P25800 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC12.28□□□□□ -0.44
LMO1P25800 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC12.28□□□□□ -0.44
LMO1P25800 RHOXF1P1-202ENST00000635473 501 ntBASIC12.28□□□□□ -0.44
LMO1P25800 GPR68-204ENST00000535815 2859 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
LMO1P25800 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
LMO1P25800 RHOH-224ENST00000622175 2254 ntAPPRIS P1 TSL 4 BASIC12.28□□□□□ -0.44
LMO1P25800 AP1G2-201ENST00000308724 3298 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
LMO1P25800 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
LMO1P25800 CASP6-202ENST00000352981 1347 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
LMO1P25800 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
LMO1P25800 AHCYP2-201ENST00000430630 1300 ntBASIC12.28□□□□□ -0.44
LMO1P25800 AL109910.1-201ENST00000452071 1330 ntTSL 2 BASIC12.28□□□□□ -0.44
LMO1P25800 AC064801.2-201ENST00000625052 1303 ntBASIC12.28□□□□□ -0.44
LMO1P25800 LRP5L-202ENST00000402859 1661 ntAPPRIS P2 TSL 5 BASIC12.28□□□□□ -0.44
LMO1P25800 ZNF202-206ENST00000529691 3384 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
LMO1P25800 ZKSCAN4-201ENST00000377294 2375 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
LMO1P25800 RASGEF1C-202ENST00000393371 2395 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
LMO1P25800 ADRB2-201ENST00000305988 3443 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
LMO1P25800 LYRM1-203ENST00000412082 1399 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
LMO1P25800 TCL1A-203ENST00000554012 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
LMO1P25800 KRT36-202ENST00000393986 1707 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
LMO1P25800 CES1P1-201ENST00000421606 1704 ntBASIC12.28□□□□□ -0.44
LMO1P25800 CALCB-203ENST00000533448 2097 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
LMO1P25800 SP8-203ENST00000617581 3496 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
LMO1P25800 MKRN2-201ENST00000170447 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
LMO1P25800 BCAR1-208ENST00000542031 2846 ntAPPRIS ALT2 TSL 2 BASIC12.28□□□□□ -0.44
LMO1P25800 PCCB-215ENST00000482086 1436 ntTSL 3 BASIC12.28□□□□□ -0.44
LMO1P25800 SYBU-235ENST00000533895 3244 ntAPPRIS P4 TSL 1 (best) BASIC12.28□□□□□ -0.44
LMO1P25800 SEPT7-201ENST00000350320 4350 ntAPPRIS P5 TSL 5 BASIC12.28□□□□□ -0.44
LMO1P25800 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
LMO1P25800 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC12.27□□□□□ -0.44
LMO1P25800 PCDHB3-201ENST00000231130 3355 ntAPPRIS P1 BASIC12.27□□□□□ -0.44
LMO1P25800 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
LMO1P25800 CD48-203ENST00000613788 1500 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
LMO1P25800 CDC25B-205ENST00000439880 3096 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
LMO1P25800 ACSM2A-202ENST00000396104 2734 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
LMO1P25800 ELAC2-201ENST00000338034 3148 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
LMO1P25800 DENND1C-202ENST00000543576 2395 ntAPPRIS ALT2 TSL 2 BASIC12.27□□□□□ -0.44
LMO1P25800 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
LMO1P25800 ANKRD13B-201ENST00000394859 3214 ntAPPRIS P1 TSL 2 BASIC12.27□□□□□ -0.44
LMO1P25800 FGGY-203ENST00000371212 1640 ntTSL 2 BASIC12.27□□□□□ -0.44
LMO1P25800 CELF1-214ENST00000531165 3650 ntTSL 2 BASIC12.27□□□□□ -0.45
LMO1P25800 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
LMO1P25800 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
LMO1P25800 NAALADL1-202ENST00000355721 2100 ntTSL 5 BASIC12.27□□□□□ -0.45
LMO1P25800 SNRPC-202ENST00000374017 1054 ntTSL 2 BASIC12.27□□□□□ -0.45
LMO1P25800 ATP6V1E1-202ENST00000399796 1208 ntTSL 2 BASIC12.27□□□□□ -0.45
LMO1P25800 HLA-V-201ENST00000429037 534 ntBASIC12.27□□□□□ -0.45
LMO1P25800 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC12.27□□□□□ -0.45
LMO1P25800 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 44.4 ms