Protein–RNA interactions for Protein: P22736

NR4A1, Nuclear receptor subfamily 4 group A member 1, humanhuman

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR4A1P22736 CCDC57-206ENST00000392347 3000 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
NR4A1P22736 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC13.7□□□□□ -0.22
NR4A1P22736 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
NR4A1P22736 TRHDE-AS1-201ENST00000426250 3684 ntTSL 5 BASIC13.7□□□□□ -0.22
NR4A1P22736 AC007787.1-201ENST00000588095 1583 ntBASIC13.7□□□□□ -0.22
NR4A1P22736 KRT36-202ENST00000393986 1707 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
NR4A1P22736 LETMD1-235ENST00000552739 1713 ntTSL 2 BASIC13.7□□□□□ -0.22
NR4A1P22736 PCDHGA6-202ENST00000610583 5650 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
NR4A1P22736 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
NR4A1P22736 MATN1-AS1-201ENST00000414532 3925 ntTSL 2 BASIC13.7□□□□□ -0.22
NR4A1P22736 ADK-205ENST00000539909 1866 ntTSL 2 BASIC13.7□□□□□ -0.22
NR4A1P22736 KIAA1683-201ENST00000392413 4402 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
NR4A1P22736 CBLB-204ENST00000405772 3237 ntTSL 2 BASIC13.69□□□□□ -0.22
NR4A1P22736 SLC35C2-213ENST00000543605 5740 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
NR4A1P22736 ACTN1-204ENST00000438964 3043 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
NR4A1P22736 PDE2A-218ENST00000540345 3027 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
NR4A1P22736 TCF3-201ENST00000262965 4451 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
NR4A1P22736 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC13.69□□□□□ -0.22
NR4A1P22736 GRN-214ENST00000589265 1632 ntTSL 5 BASIC13.69□□□□□ -0.22
NR4A1P22736 AP003555.1-202ENST00000511013 1755 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
NR4A1P22736 ZIK1-204ENST00000597850 4181 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
NR4A1P22736 ITGB8-201ENST00000222573 8751 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
NR4A1P22736 PNPLA6-201ENST00000221249 4617 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
NR4A1P22736 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
NR4A1P22736 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
NR4A1P22736 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC13.69□□□□□ -0.22
NR4A1P22736 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
NR4A1P22736 RASL12-203ENST00000434605 982 ntTSL 2 BASIC13.69□□□□□ -0.22
NR4A1P22736 SPTLC1P1-201ENST00000447199 261 ntBASIC13.69□□□□□ -0.22
NR4A1P22736 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC13.69□□□□□ -0.22
NR4A1P22736 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC13.69□□□□□ -0.22
NR4A1P22736 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC13.69□□□□□ -0.22
NR4A1P22736 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
NR4A1P22736 KRT8P22-201ENST00000562317 1415 ntBASIC13.69□□□□□ -0.22
NR4A1P22736 HYOU1-218ENST00000614668 1569 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
NR4A1P22736 MEG3-213ENST00000455531 4867 ntTSL 2 BASIC13.69□□□□□ -0.22
NR4A1P22736 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
NR4A1P22736 LATS1-207ENST00000543571 7517 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
NR4A1P22736 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
NR4A1P22736 CYTH1-215ENST00000591455 3286 ntAPPRIS P3 TSL 2 BASIC13.69□□□□□ -0.22
NR4A1P22736 PCDHA11-202ENST00000616325 3418 ntAPPRIS ALT2 BASIC13.69□□□□□ -0.22
NR4A1P22736 APLP2-201ENST00000263574 3727 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
NR4A1P22736 EPHA5-203ENST00000432638 3662 ntTSL 5 BASIC13.69□□□□□ -0.22
NR4A1P22736 PWWP2A-202ENST00000456329 3991 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
NR4A1P22736 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
NR4A1P22736 TESMIN-204ENST00000443940 3495 ntTSL 2 BASIC13.69□□□□□ -0.22
NR4A1P22736 KIF3A-201ENST00000378735 3266 ntAPPRIS ALT1 TSL 1 (best) BASIC13.68□□□□□ -0.22
NR4A1P22736 DISC1-221ENST00000620189 6689 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
NR4A1P22736 MFAP4-202ENST00000395592 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
NR4A1P22736 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC13.68□□□□□ -0.22
NR4A1P22736 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC13.68□□□□□ -0.22
NR4A1P22736 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC13.68□□□□□ -0.22
NR4A1P22736 KARS-201ENST00000302445 2005 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
NR4A1P22736 AFAP1-203ENST00000382543 2590 ntAPPRIS ALT1 TSL 5 BASIC13.68□□□□□ -0.22
NR4A1P22736 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
NR4A1P22736 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
NR4A1P22736 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
NR4A1P22736 BAIAP3-201ENST00000324385 4678 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
NR4A1P22736 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
NR4A1P22736 EBF3-201ENST00000355311 2993 ntAPPRIS ALT1 TSL 5 BASIC13.68□□□□□ -0.22
NR4A1P22736 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
NR4A1P22736 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
NR4A1P22736 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
NR4A1P22736 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
NR4A1P22736 AC136604.1-201ENST00000418535 575 ntBASIC13.68□□□□□ -0.22
NR4A1P22736 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC13.68□□□□□ -0.22
NR4A1P22736 TARDBPP1-201ENST00000442013 1203 ntBASIC13.68□□□□□ -0.22
NR4A1P22736 TMPRSS11CP-201ENST00000453277 683 ntBASIC13.68□□□□□ -0.22
NR4A1P22736 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
NR4A1P22736 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC13.68□□□□□ -0.22
NR4A1P22736 POLD4-211ENST00000539074 714 ntTSL 3 BASIC13.68□□□□□ -0.22
NR4A1P22736 TIMM17BP1-201ENST00000545713 516 ntBASIC13.68□□□□□ -0.22
NR4A1P22736 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC13.68□□□□□ -0.22
NR4A1P22736 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
NR4A1P22736 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC13.68□□□□□ -0.22
NR4A1P22736 SRD5A3P1-201ENST00000603021 949 ntBASIC13.68□□□□□ -0.22
NR4A1P22736 AC004233.3-201ENST00000607794 1269 ntBASIC13.68□□□□□ -0.22
NR4A1P22736 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC13.68□□□□□ -0.22
NR4A1P22736 VCP-201ENST00000358901 4370 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
NR4A1P22736 ABAT-213ENST00000567812 1959 ntTSL 2 BASIC13.68□□□□□ -0.22
NR4A1P22736 CADM1-204ENST00000536727 3520 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
NR4A1P22736 SMIM14-201ENST00000295958 6483 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
NR4A1P22736 AC090505.1-201ENST00000430515 1834 ntBASIC13.68□□□□□ -0.22
NR4A1P22736 AC068075.1-201ENST00000519714 1832 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
NR4A1P22736 HJURP-207ENST00000441687 2934 ntAPPRIS ALT2 TSL 2 BASIC13.68□□□□□ -0.22
NR4A1P22736 PTK7-205ENST00000352931 4023 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
NR4A1P22736 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC13.68□□□□□ -0.22
NR4A1P22736 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
NR4A1P22736 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
NR4A1P22736 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
NR4A1P22736 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC13.68□□□□□ -0.22
NR4A1P22736 CPT1A-202ENST00000376618 2635 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
NR4A1P22736 MBP-205ENST00000397860 4844 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
NR4A1P22736 KCTD9-201ENST00000221200 3401 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
NR4A1P22736 TATDN3-201ENST00000366973 2321 ntAPPRIS ALT1 TSL 1 (best) BASIC13.68□□□□□ -0.22
NR4A1P22736 SFI1-229ENST00000540643 4226 ntAPPRIS ALT2 TSL 2 BASIC13.68□□□□□ -0.22
NR4A1P22736 SLC38A4-201ENST00000266579 2728 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
NR4A1P22736 MDM1-203ENST00000393543 2718 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
NR4A1P22736 TRDMT1-203ENST00000377799 3527 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
NR4A1P22736 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC13.68□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms