Protein–RNA interactions for Protein: P18074

ERCC2, TFIIH basal transcription factor complex helicase XPD subunit, humanhuman

Predictions only

Length 760 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2P18074 LRP5L-202ENST00000402859 1661 ntAPPRIS P2 TSL 5 BASIC15.03■□□□□ -0
ERCC2P18074 SLC26A8-201ENST00000355574 3463 ntAPPRIS P1 TSL 2 BASIC15.02■□□□□ -0
ERCC2P18074 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC15.02■□□□□ -0
ERCC2P18074 CDYL-205ENST00000449732 2139 ntTSL 2 BASIC15.02■□□□□ -0
ERCC2P18074 MAX-219ENST00000618858 2141 ntTSL 1 (best) BASIC15.02■□□□□ -0
ERCC2P18074 TMEM117-207ENST00000551577 2643 ntTSL 1 (best) BASIC15.02■□□□□ -0
ERCC2P18074 AC011899.2-202ENST00000438047 4302 ntTSL 1 (best) BASIC15.02■□□□□ -0
ERCC2P18074 SLC18A1-203ENST00000381608 1419 ntTSL 5 BASIC15.02■□□□□ -0
ERCC2P18074 KDM2B-201ENST00000377069 5224 ntAPPRIS ALT2 TSL 2 BASIC15.02■□□□□ -0
ERCC2P18074 AP003392.4-202ENST00000526453 1359 ntTSL 2 BASIC15.02■□□□□ -0
ERCC2P18074 GCLM-204ENST00000615724 3008 ntTSL 1 (best) BASIC15.02■□□□□ -0
ERCC2P18074 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
ERCC2P18074 KLK3-216ENST00000617027 1341 ntTSL 1 (best) BASIC15.02■□□□□ -0
ERCC2P18074 AC064801.2-201ENST00000625052 1303 ntBASIC15.02■□□□□ -0
ERCC2P18074 SH3BGR-201ENST00000333634 1251 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
ERCC2P18074 BTBD6P1-201ENST00000412176 1267 ntBASIC15.02■□□□□ -0
ERCC2P18074 AL451065.1-201ENST00000428958 238 ntTSL 5 BASIC15.02■□□□□ -0
ERCC2P18074 LINC01762-204ENST00000434879 436 ntTSL 2 BASIC15.02■□□□□ -0
ERCC2P18074 RPL35A-205ENST00000448864 549 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
ERCC2P18074 AC006487.1-201ENST00000514506 1221 ntTSL 2 BASIC15.02■□□□□ -0
ERCC2P18074 PAX5-211ENST00000522003 1019 ntTSL 1 (best) BASIC15.02■□□□□ -0
ERCC2P18074 CFL1-212ENST00000531413 636 ntTSL 3 BASIC15.02■□□□□ -0
ERCC2P18074 AP003385.5-201ENST00000533876 555 ntTSL 4 BASIC15.02■□□□□ -0
ERCC2P18074 RIT1-205ENST00000539040 919 ntTSL 2 BASIC15.02■□□□□ -0
ERCC2P18074 AL583722.2-201ENST00000557223 663 ntTSL 3 BASIC15.02■□□□□ -0
ERCC2P18074 RANGRF-205ENST00000580434 749 ntTSL 1 (best) BASIC15.02■□□□□ -0
ERCC2P18074 AC079336.1-201ENST00000583156 420 ntTSL 3 BASIC15.02■□□□□ -0
ERCC2P18074 AC008403.1-201ENST00000595676 443 ntAPPRIS P1 TSL 2 BASIC15.02■□□□□ -0
ERCC2P18074 KLK3-211ENST00000597483 810 ntTSL 2 BASIC15.02■□□□□ -0
ERCC2P18074 KLK11-210ENST00000600362 759 ntTSL 3 BASIC15.02■□□□□ -0
ERCC2P18074 AL096828.3-201ENST00000615354 462 ntBASIC15.02■□□□□ -0
ERCC2P18074 LINC00595-217ENST00000635545 549 ntTSL 4 BASIC15.02■□□□□ -0
ERCC2P18074 ALAS2-202ENST00000335854 1795 ntTSL 2 BASIC15.02□□□□□ -0.01
ERCC2P18074 WNT9B-202ENST00000393461 2654 ntTSL 2 BASIC15.02□□□□□ -0.01
ERCC2P18074 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC15.02□□□□□ -0.01
ERCC2P18074 CRHR2-202ENST00000348438 1600 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
ERCC2P18074 NTM-205ENST00000425719 1607 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
ERCC2P18074 ACSM1-201ENST00000307493 2051 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
ERCC2P18074 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
ERCC2P18074 CSF1-201ENST00000329608 4210 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
ERCC2P18074 CNOT3-201ENST00000221232 2852 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
ERCC2P18074 MLXIPL-201ENST00000313375 3278 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
ERCC2P18074 MLXIPL-206ENST00000434326 3252 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
ERCC2P18074 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC15.02□□□□□ -0.01
ERCC2P18074 PRKD1-202ENST00000415220 3189 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
ERCC2P18074 WDR83-201ENST00000418543 1457 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
ERCC2P18074 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC15.01□□□□□ -0.01
ERCC2P18074 TRIM23-202ENST00000274327 1829 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
ERCC2P18074 AP4M1-201ENST00000359593 1817 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
ERCC2P18074 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
ERCC2P18074 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC15.01□□□□□ -0.01
ERCC2P18074 CYP26A1-202ENST00000371531 2245 ntTSL 2 BASIC15.01□□□□□ -0.01
ERCC2P18074 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
ERCC2P18074 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
ERCC2P18074 RARG-203ENST00000425354 2959 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
ERCC2P18074 STK33-203ENST00000396672 2558 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
ERCC2P18074 DDC-AS1-201ENST00000454521 1776 ntTSL 2 BASIC15.01□□□□□ -0.01
ERCC2P18074 LRIF1-202ENST00000485275 1796 ntAPPRIS ALT2 TSL 2 BASIC15.01□□□□□ -0.01
ERCC2P18074 CCDC50-201ENST00000392455 8429 ntAPPRIS ALT1 TSL 1 (best) BASIC15.01□□□□□ -0.01
ERCC2P18074 RCHY1-202ENST00000380840 1735 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
ERCC2P18074 SMAD2-212ENST00000591214 1714 ntTSL 2 BASIC15.01□□□□□ -0.01
ERCC2P18074 FAM219A-209ENST00000445726 3644 ntAPPRIS ALT1 TSL 2 BASIC15.01□□□□□ -0.01
ERCC2P18074 CXorf40B-202ENST00000370404 1316 ntAPPRIS P2 TSL 2 BASIC15.01□□□□□ -0.01
ERCC2P18074 GABRA1-201ENST00000023897 2083 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
ERCC2P18074 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC15.01□□□□□ -0.01
ERCC2P18074 CPN2-202ENST00000429275 2008 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
ERCC2P18074 TLE3-203ENST00000451782 2356 ntAPPRIS ALT1 TSL 5 BASIC15.01□□□□□ -0.01
ERCC2P18074 FAM24B-202ENST00000368898 745 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
ERCC2P18074 SYNGR1-204ENST00000381535 1295 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
ERCC2P18074 ZFAND2B-203ENST00000409206 1159 ntTSL 2 BASIC15.01□□□□□ -0.01
ERCC2P18074 AL021707.3-201ENST00000418803 527 ntTSL 5 BASIC15.01□□□□□ -0.01
ERCC2P18074 FAM58BP-201ENST00000439056 645 ntBASIC15.01□□□□□ -0.01
ERCC2P18074 RPS2P32-201ENST00000439199 892 ntBASIC15.01□□□□□ -0.01
ERCC2P18074 AC012441.2-201ENST00000444843 739 ntBASIC15.01□□□□□ -0.01
ERCC2P18074 ZNF789-204ENST00000448667 1055 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
ERCC2P18074 TMEM225B-203ENST00000453227 1041 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
ERCC2P18074 RBM8B-201ENST00000555532 525 ntBASIC15.01□□□□□ -0.01
ERCC2P18074 AC000032.1-201ENST00000562538 491 ntTSL 2 BASIC15.01□□□□□ -0.01
ERCC2P18074 AC005730.2-201ENST00000564549 1184 ntBASIC15.01□□□□□ -0.01
ERCC2P18074 AC003070.2-201ENST00000589730 386 ntTSL 3 BASIC15.01□□□□□ -0.01
ERCC2P18074 AC011495.3-201ENST00000596472 427 ntTSL 2 BASIC15.01□□□□□ -0.01
ERCC2P18074 PLA2G4C-AS1-201ENST00000596552 568 ntTSL 3 BASIC15.01□□□□□ -0.01
ERCC2P18074 ZNF586-206ENST00000599802 581 ntTSL 3 BASIC15.01□□□□□ -0.01
ERCC2P18074 AL008721.1-201ENST00000609964 604 ntBASIC15.01□□□□□ -0.01
ERCC2P18074 TINF2-215ENST00000626689 1643 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
ERCC2P18074 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
ERCC2P18074 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
ERCC2P18074 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
ERCC2P18074 SC5D-202ENST00000392789 2258 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
ERCC2P18074 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC15.01□□□□□ -0.01
ERCC2P18074 RSPRY1-202ENST00000537866 3586 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
ERCC2P18074 PNPLA6-202ENST00000414982 4522 ntTSL 2 BASIC15.01□□□□□ -0.01
ERCC2P18074 PXDNL-201ENST00000356297 4805 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
ERCC2P18074 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
ERCC2P18074 ZNF251-201ENST00000292562 2807 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
ERCC2P18074 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
ERCC2P18074 MPP2-214ENST00000523501 2121 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
ERCC2P18074 AL928921.2-201ENST00000641325 2442 ntBASIC15.01□□□□□ -0.01
ERCC2P18074 GOLGA8VP-201ENST00000559009 1798 ntBASIC15.01□□□□□ -0.01
ERCC2P18074 SPRY1-208ENST00000622283 2352 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms