Protein–RNA interactions for Protein: P17677

GAP43, Neuromodulin, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GAP43P17677 AC011365.2-201ENST00000520041 810 ntTSL 5 BASIC16.07■□□□□ 0.16
GAP43P17677 CFL1-212ENST00000531413 636 ntTSL 3 BASIC16.07■□□□□ 0.16
GAP43P17677 C15orf40-211ENST00000565712 559 ntTSL 3 BASIC16.07■□□□□ 0.16
GAP43P17677 DERL2-202ENST00000570848 657 ntTSL 5 BASIC16.07■□□□□ 0.16
GAP43P17677 AC135178.3-201ENST00000583963 531 ntTSL 4 BASIC16.07■□□□□ 0.16
GAP43P17677 THAP4-206ENST00000612200 969 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
GAP43P17677 MUC1-226ENST00000614519 1093 ntTSL 2 BASIC16.07■□□□□ 0.16
GAP43P17677 AP000346.4-201ENST00000614827 381 ntBASIC16.07■□□□□ 0.16
GAP43P17677 FP565260.5-201ENST00000623188 479 ntTSL 3 BASIC16.07■□□□□ 0.16
GAP43P17677 TUBB8P4-201ENST00000511806 1324 ntBASIC16.07■□□□□ 0.16
GAP43P17677 HSFX2-201ENST00000598963 1365 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
GAP43P17677 TMEM9-204ENST00000367334 1529 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
GAP43P17677 RCC1-201ENST00000373831 1577 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
GAP43P17677 AC109466.1-209ENST00000486913 1618 ntTSL 2 BASIC16.07■□□□□ 0.16
GAP43P17677 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC16.07■□□□□ 0.16
GAP43P17677 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
GAP43P17677 GTF3C2-214ENST00000622534 1858 ntTSL 5 BASIC16.07■□□□□ 0.16
GAP43P17677 MUTYH-210ENST00000450313 1929 ntTSL 5 BASIC16.07■□□□□ 0.16
GAP43P17677 CDYL-205ENST00000449732 2139 ntTSL 2 BASIC16.07■□□□□ 0.16
GAP43P17677 PRKAG2-215ENST00000492843 2699 ntTSL 5 BASIC16.07■□□□□ 0.16
GAP43P17677 NAA60-202ENST00000407558 2735 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
GAP43P17677 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
GAP43P17677 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
GAP43P17677 MOCS3-201ENST00000244051 5106 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
GAP43P17677 SETD1B-203ENST00000604567 5969 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
GAP43P17677 BRD1-205ENST00000457780 4997 ntTSL 5 BASIC16.06■□□□□ 0.16
GAP43P17677 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
GAP43P17677 SEZ6-203ENST00000360295 4306 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
GAP43P17677 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
GAP43P17677 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
GAP43P17677 C5orf66-206ENST00000624272 2479 ntTSL 2 BASIC16.06■□□□□ 0.16
GAP43P17677 SC5D-202ENST00000392789 2258 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
GAP43P17677 C7orf72-201ENST00000297001 2028 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
GAP43P17677 FAM149A-203ENST00000389354 1815 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
GAP43P17677 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC16.06■□□□□ 0.16
GAP43P17677 C2-205ENST00000418949 1658 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
GAP43P17677 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
GAP43P17677 TMEM200C-202ENST00000581347 10638 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
GAP43P17677 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC16.06■□□□□ 0.16
GAP43P17677 CCDC197-206ENST00000640978 1429 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
GAP43P17677 Metazoa_SRP.6-201ENST00000366384 298 ntBASIC16.06■□□□□ 0.16
GAP43P17677 MRPL55-214ENST00000366741 603 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
GAP43P17677 MRPL55-218ENST00000366747 603 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
GAP43P17677 AL009181.1-201ENST00000418471 1085 ntTSL 5 BASIC16.06■□□□□ 0.16
GAP43P17677 ZNF529-AS1-201ENST00000448373 1004 ntTSL 2 BASIC16.06■□□□□ 0.16
GAP43P17677 ZNF789-204ENST00000448667 1055 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
GAP43P17677 TMEM225B-203ENST00000453227 1041 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
GAP43P17677 FAM167A-AS1-202ENST00000533578 1222 ntTSL 2 BASIC16.06■□□□□ 0.16
GAP43P17677 AC000032.1-201ENST00000562538 491 ntTSL 2 BASIC16.06■□□□□ 0.16
GAP43P17677 TMEM208-207ENST00000563953 887 ntTSL 2 BASIC16.06■□□□□ 0.16
GAP43P17677 ACAP1-208ENST00000574499 412 ntTSL 2 BASIC16.06■□□□□ 0.16
GAP43P17677 AC104982.3-201ENST00000581995 514 ntBASIC16.06■□□□□ 0.16
GAP43P17677 AL008721.1-201ENST00000609964 604 ntBASIC16.06■□□□□ 0.16
GAP43P17677 AC005695.3-201ENST00000614522 232 ntBASIC16.06■□□□□ 0.16
GAP43P17677 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
GAP43P17677 SHCBP1-201ENST00000303383 3461 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
GAP43P17677 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC16.06■□□□□ 0.16
GAP43P17677 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC16.06■□□□□ 0.16
GAP43P17677 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
GAP43P17677 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
GAP43P17677 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
GAP43P17677 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
GAP43P17677 KBTBD4-202ENST00000430070 2372 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
GAP43P17677 FRMD3-201ENST00000304195 5297 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
GAP43P17677 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
GAP43P17677 SLC26A8-201ENST00000355574 3463 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
GAP43P17677 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
GAP43P17677 CASC2-202ENST00000426021 3232 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
GAP43P17677 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
GAP43P17677 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC16.05■□□□□ 0.16
GAP43P17677 KLHL33-203ENST00000637228 5404 ntTSL 5 BASIC16.05■□□□□ 0.16
GAP43P17677 C12orf73-201ENST00000378090 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
GAP43P17677 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
GAP43P17677 GPX3-201ENST00000388825 1636 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
GAP43P17677 ILDR1-205ENST00000462014 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
GAP43P17677 TUBA3D-201ENST00000321253 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
GAP43P17677 WIZ-203ENST00000545156 4466 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
GAP43P17677 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
GAP43P17677 SLCO2B1-203ENST00000428359 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
GAP43P17677 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC16.05■□□□□ 0.16
GAP43P17677 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
GAP43P17677 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
GAP43P17677 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
GAP43P17677 RPS3-201ENST00000278572 907 ntTSL 3 BASIC16.05■□□□□ 0.16
GAP43P17677 CALCA-201ENST00000331587 843 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
GAP43P17677 RPF1-202ENST00000370656 724 ntTSL 2 BASIC16.05■□□□□ 0.16
GAP43P17677 ZNF248-202ENST00000374648 1286 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
GAP43P17677 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC16.05■□□□□ 0.16
GAP43P17677 SMS-201ENST00000379404 1174 ntTSL 3 BASIC16.05■□□□□ 0.16
GAP43P17677 RNF144A-AS1-203ENST00000426122 579 ntTSL 4 BASIC16.05■□□□□ 0.16
GAP43P17677 KLC4-205ENST00000458460 1251 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
GAP43P17677 RPL18P13-201ENST00000478088 569 ntBASIC16.05■□□□□ 0.16
GAP43P17677 HMGCLL1-208ENST00000508459 884 ntTSL 2 BASIC16.05■□□□□ 0.16
GAP43P17677 LINC01848-201ENST00000523446 518 ntTSL 3 BASIC16.05■□□□□ 0.16
GAP43P17677 FAM8A2P-201ENST00000528813 1142 ntBASIC16.05■□□□□ 0.16
GAP43P17677 PPP1R32-205ENST00000538185 1107 ntTSL 2 BASIC16.05■□□□□ 0.16
GAP43P17677 NAA40-206ENST00000542163 1035 ntTSL 2 BASIC16.05■□□□□ 0.16
GAP43P17677 AC124068.2-202ENST00000562356 612 ntTSL 3 BASIC16.05■□□□□ 0.16
GAP43P17677 AC124068.2-201ENST00000569473 1109 ntBASIC16.05■□□□□ 0.16
GAP43P17677 BNIP3P13-201ENST00000599968 566 ntBASIC16.05■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 259.5 ms