Protein–RNA interactions for Protein: P09486

SPARC, SPARC, humanhuman

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPARCP09486 PDE4A-209ENST00000592685 2707 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
SPARCP09486 FBXL16-201ENST00000324361 3411 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
SPARCP09486 CAND2-204ENST00000456430 4573 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
SPARCP09486 MED22-209ENST00000610888 3867 ntAPPRIS ALT1 TSL 1 (best) BASIC13.1□□□□□ -0.31
SPARCP09486 ILDR1-205ENST00000462014 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
SPARCP09486 ABCC10-204ENST00000372530 5033 ntAPPRIS ALT2 TSL 2 BASIC13.1□□□□□ -0.31
SPARCP09486 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
SPARCP09486 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC13.09□□□□□ -0.31
SPARCP09486 ADAM15-203ENST00000356955 2949 ntAPPRIS P4 TSL 1 (best) BASIC13.09□□□□□ -0.31
SPARCP09486 REV3L-207ENST00000435970 10943 ntTSL 2 BASIC13.09□□□□□ -0.31
SPARCP09486 ZKSCAN4-201ENST00000377294 2375 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
SPARCP09486 LAT2-205ENST00000460943 2527 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
SPARCP09486 PEX5-207ENST00000455147 2689 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
SPARCP09486 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
SPARCP09486 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
SPARCP09486 ILK-201ENST00000299421 1802 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
SPARCP09486 AC215219.1-201ENST00000400706 1817 ntBASIC13.09□□□□□ -0.31
SPARCP09486 AC010247.2-201ENST00000559786 1955 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
SPARCP09486 ZFP36L1-201ENST00000336440 3026 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
SPARCP09486 AP3M2-201ENST00000174653 3661 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
SPARCP09486 TSPAN12-201ENST00000222747 2798 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
SPARCP09486 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
SPARCP09486 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
SPARCP09486 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
SPARCP09486 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
SPARCP09486 TOMM40L-201ENST00000367987 2636 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
SPARCP09486 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC13.09□□□□□ -0.31
SPARCP09486 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
SPARCP09486 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
SPARCP09486 APBB1IP-202ENST00000376236 2771 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
SPARCP09486 MIR661-201ENST00000384842 89 ntBASIC13.09□□□□□ -0.31
SPARCP09486 GRM7-203ENST00000389336 2901 ntAPPRIS ALT1 TSL 1 (best) BASIC13.09□□□□□ -0.31
SPARCP09486 HSDL2-202ENST00000398805 3350 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
SPARCP09486 AC236430.1-201ENST00000402231 743 ntBASIC13.09□□□□□ -0.31
SPARCP09486 GOLGA6L11P-201ENST00000417252 1298 ntBASIC13.09□□□□□ -0.31
SPARCP09486 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC13.09□□□□□ -0.31
SPARCP09486 KYAT1-205ENST00000436267 2487 ntTSL 2 BASIC13.09□□□□□ -0.31
SPARCP09486 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC13.09□□□□□ -0.31
SPARCP09486 AC245100.3-201ENST00000441281 285 ntBASIC13.09□□□□□ -0.31
SPARCP09486 Z82198.1-201ENST00000447396 437 ntTSL 3 BASIC13.09□□□□□ -0.31
SPARCP09486 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
SPARCP09486 GCOM2-201ENST00000509133 1104 ntBASIC13.09□□□□□ -0.31
SPARCP09486 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC13.09□□□□□ -0.31
SPARCP09486 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC13.09□□□□□ -0.31
SPARCP09486 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC13.09□□□□□ -0.31
SPARCP09486 CEP295NL-205ENST00000619342 1866 ntTSL 5 BASIC13.09□□□□□ -0.31
SPARCP09486 AC011498.7-201ENST00000624986 2027 ntBASIC13.09□□□□□ -0.31
SPARCP09486 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
SPARCP09486 RIPOR1-204ENST00000428437 4152 ntAPPRIS ALT2 TSL 2 BASIC13.09□□□□□ -0.31
SPARCP09486 WNT7A-201ENST00000285018 4041 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
SPARCP09486 GPC6-201ENST00000377047 6467 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
SPARCP09486 ELAVL1-201ENST00000407627 6015 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
SPARCP09486 ARHGEF17-201ENST00000263674 7853 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
SPARCP09486 TP73-211ENST00000604074 4806 ntTSL 5 BASIC13.09□□□□□ -0.31
SPARCP09486 ADCY3-202ENST00000405392 4397 ntAPPRIS ALT1 TSL 1 (best) BASIC13.09□□□□□ -0.31
SPARCP09486 PLCXD2-201ENST00000393934 2063 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
SPARCP09486 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
SPARCP09486 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
SPARCP09486 MEFV-201ENST00000219596 3499 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
SPARCP09486 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
SPARCP09486 AC020910.6-201ENST00000623084 1459 ntBASIC13.09□□□□□ -0.31
SPARCP09486 MSRB3-202ENST00000355192 4289 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
SPARCP09486 SLC29A4-203ENST00000406453 2734 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
SPARCP09486 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
SPARCP09486 CLUHP2-201ENST00000426660 1303 ntBASIC13.09□□□□□ -0.31
SPARCP09486 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
SPARCP09486 RTN4-202ENST00000337526 4790 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
SPARCP09486 DHRS4-AS1-204ENST00000555045 1848 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
SPARCP09486 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC13.08□□□□□ -0.31
SPARCP09486 RUFY1-202ENST00000393438 2454 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.31
SPARCP09486 USP19-202ENST00000398888 4559 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.31
SPARCP09486 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
SPARCP09486 ZBTB11-201ENST00000312938 6020 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
SPARCP09486 SAR1A-204ENST00000373241 2996 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
SPARCP09486 CYP4B1-201ENST00000271153 2171 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.31
SPARCP09486 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.31
SPARCP09486 SP8-203ENST00000617581 3496 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.31
SPARCP09486 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC13.08□□□□□ -0.31
SPARCP09486 SPAST-201ENST00000315285 5117 ntAPPRIS P4 TSL 1 (best) BASIC13.08□□□□□ -0.32
SPARCP09486 AC020910.5-201ENST00000623668 1865 ntBASIC13.08□□□□□ -0.32
SPARCP09486 VPS26B-201ENST00000281187 3691 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
SPARCP09486 LOXL3-202ENST00000393937 2398 ntTSL 5 BASIC13.08□□□□□ -0.32
SPARCP09486 MIR193BHG-211ENST00000641433 5365 ntBASIC13.08□□□□□ -0.32
SPARCP09486 HAGLR-202ENST00000416928 4235 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
SPARCP09486 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.32
SPARCP09486 ITPR2-202ENST00000381340 11405 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
SPARCP09486 SMARCA5-201ENST00000283131 7923 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
SPARCP09486 AC093520.1-201ENST00000567545 1767 ntTSL 5 BASIC13.08□□□□□ -0.32
SPARCP09486 LRRC8D-201ENST00000337338 3950 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.32
SPARCP09486 RASSF3-204ENST00000542104 3492 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
SPARCP09486 PELP1-212ENST00000574876 3465 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
SPARCP09486 MEX3B-202ENST00000558133 4333 ntBASIC13.08□□□□□ -0.32
SPARCP09486 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
SPARCP09486 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
SPARCP09486 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
SPARCP09486 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
SPARCP09486 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC13.08□□□□□ -0.32
SPARCP09486 RN7SKP230-201ENST00000365642 335 ntBASIC13.08□□□□□ -0.32
SPARCP09486 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC13.08□□□□□ -0.32
SPARCP09486 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms