Protein–RNA interactions for Protein: P07988

SFTPB, Pulmonary surfactant-associated protein B, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SFTPBP07988 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC12.82□□□□□ -0.36
SFTPBP07988 SSTR3-201ENST00000610913 4100 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SFTPBP07988 ZFHX2-205ENST00000615307 1972 ntTSL 2 BASIC12.82□□□□□ -0.36
SFTPBP07988 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SFTPBP07988 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SFTPBP07988 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SFTPBP07988 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC12.82□□□□□ -0.36
SFTPBP07988 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
SFTPBP07988 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
SFTPBP07988 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
SFTPBP07988 HNRNPA1P13-201ENST00000510646 963 ntBASIC12.82□□□□□ -0.36
SFTPBP07988 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC12.82□□□□□ -0.36
SFTPBP07988 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC12.82□□□□□ -0.36
SFTPBP07988 NEU3-203ENST00000529024 581 ntTSL 3 BASIC12.82□□□□□ -0.36
SFTPBP07988 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC12.82□□□□□ -0.36
SFTPBP07988 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC12.82□□□□□ -0.36
SFTPBP07988 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC12.82□□□□□ -0.36
SFTPBP07988 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC12.82□□□□□ -0.36
SFTPBP07988 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC12.82□□□□□ -0.36
SFTPBP07988 BX539320.1-201ENST00000623759 877 ntBASIC12.82□□□□□ -0.36
SFTPBP07988 PRSS30P-206ENST00000641773 873 ntBASIC12.82□□□□□ -0.36
SFTPBP07988 UGT3A2-201ENST00000282507 2355 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SFTPBP07988 GFRA1-201ENST00000355422 2583 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
SFTPBP07988 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SFTPBP07988 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SFTPBP07988 SAR1A-204ENST00000373241 2996 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SFTPBP07988 WDFY1-201ENST00000233055 4660 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SFTPBP07988 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
SFTPBP07988 ADAMTSL4-203ENST00000369039 4319 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
SFTPBP07988 FAM219A-203ENST00000379080 3591 ntTSL 2 BASIC12.82□□□□□ -0.36
SFTPBP07988 CYP26B1-201ENST00000001146 4732 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SFTPBP07988 SMTN-223ENST00000619644 3227 ntTSL 2 BASIC12.82□□□□□ -0.36
SFTPBP07988 NEK4-201ENST00000233027 6057 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
SFTPBP07988 NRIP3-201ENST00000309166 3809 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SFTPBP07988 IKZF1-204ENST00000349824 5757 ntTSL 5 BASIC12.82□□□□□ -0.36
SFTPBP07988 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
SFTPBP07988 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC12.81□□□□□ -0.36
SFTPBP07988 LOXL3-202ENST00000393937 2398 ntTSL 5 BASIC12.81□□□□□ -0.36
SFTPBP07988 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
SFTPBP07988 WDR77-201ENST00000235090 2576 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
SFTPBP07988 MAD1L1-204ENST00000406869 2991 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
SFTPBP07988 MYADM-203ENST00000391769 3186 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
SFTPBP07988 PITRM1-206ENST00000451104 3183 ntTSL 2 BASIC12.81□□□□□ -0.36
SFTPBP07988 PDLIM2-201ENST00000265810 4592 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
SFTPBP07988 SHPK-201ENST00000225519 3838 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
SFTPBP07988 THBS4-201ENST00000350881 3222 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
SFTPBP07988 BAG2-201ENST00000370693 6651 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
SFTPBP07988 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
SFTPBP07988 AC015802.1-201ENST00000588104 1449 ntBASIC12.81□□□□□ -0.36
SFTPBP07988 TTC28-AS1-212ENST00000433317 3080 ntTSL 5 BASIC12.81□□□□□ -0.36
SFTPBP07988 BCAR1-205ENST00000420641 2725 ntAPPRIS ALT2 TSL 2 BASIC12.81□□□□□ -0.36
SFTPBP07988 NDUFC2-201ENST00000281031 2518 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
SFTPBP07988 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
SFTPBP07988 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
SFTPBP07988 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
SFTPBP07988 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC12.81□□□□□ -0.36
SFTPBP07988 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
SFTPBP07988 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
SFTPBP07988 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC12.81□□□□□ -0.36
SFTPBP07988 TMEM14DP-201ENST00000422205 345 ntBASIC12.81□□□□□ -0.36
SFTPBP07988 NUS1P3-201ENST00000423502 862 ntBASIC12.81□□□□□ -0.36
SFTPBP07988 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC12.81□□□□□ -0.36
SFTPBP07988 U91328.1-201ENST00000437528 223 ntBASIC12.81□□□□□ -0.36
SFTPBP07988 GLI4-203ENST00000517468 963 ntTSL 5 BASIC12.81□□□□□ -0.36
SFTPBP07988 AL359711.2-201ENST00000563105 872 ntBASIC12.81□□□□□ -0.36
SFTPBP07988 AC120045.2-201ENST00000567334 178 ntBASIC12.81□□□□□ -0.36
SFTPBP07988 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC12.81□□□□□ -0.36
SFTPBP07988 INF2-209ENST00000617571 2956 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
SFTPBP07988 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC12.81□□□□□ -0.36
SFTPBP07988 RGS22-201ENST00000360863 4296 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
SFTPBP07988 TLE1-203ENST00000376499 3893 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
SFTPBP07988 AL359881.3-201ENST00000602640 1721 ntBASIC12.81□□□□□ -0.36
SFTPBP07988 POLM-203ENST00000395831 2380 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
SFTPBP07988 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
SFTPBP07988 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
SFTPBP07988 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
SFTPBP07988 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
SFTPBP07988 AL354702.1-201ENST00000442006 1960 ntBASIC12.81□□□□□ -0.36
SFTPBP07988 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC12.81□□□□□ -0.36
SFTPBP07988 MORC4-202ENST00000355610 3834 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
SFTPBP07988 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC12.81□□□□□ -0.36
SFTPBP07988 PTK7-203ENST00000345201 4071 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
SFTPBP07988 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
SFTPBP07988 SLC20A2-208ENST00000520262 2992 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
SFTPBP07988 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC12.81□□□□□ -0.36
SFTPBP07988 CYTH2-203ENST00000427476 4606 ntAPPRIS ALT1 TSL 1 (best) BASIC12.81□□□□□ -0.36
SFTPBP07988 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC12.8□□□□□ -0.36
SFTPBP07988 HNRNPH3-201ENST00000265866 2339 ntAPPRIS P4 TSL 1 (best) BASIC12.8□□□□□ -0.36
SFTPBP07988 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
SFTPBP07988 SIRPA-202ENST00000358771 3996 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
SFTPBP07988 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC12.8□□□□□ -0.36
SFTPBP07988 ESPN-201ENST00000377828 3531 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
SFTPBP07988 PRR34-201ENST00000396008 2817 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
SFTPBP07988 PHKG1-210ENST00000537360 2139 ntAPPRIS ALT1 TSL 1 (best) BASIC12.8□□□□□ -0.36
SFTPBP07988 TNS2-203ENST00000379902 4737 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
SFTPBP07988 PHTF1-203ENST00000369600 3075 ntTSL 5 BASIC12.8□□□□□ -0.36
SFTPBP07988 KRT8P14-201ENST00000414254 1442 ntBASIC12.8□□□□□ -0.36
SFTPBP07988 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
SFTPBP07988 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
SFTPBP07988 CAD-202ENST00000403525 6900 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms