Protein–RNA interactions for Protein: P06727

APOA4, Apolipoprotein A-IV, humanhuman

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOA4P06727 KRT90P-201ENST00000549264 1064 ntBASIC14.7□□□□□ -0.06
APOA4P06727 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC14.7□□□□□ -0.06
APOA4P06727 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC14.7□□□□□ -0.06
APOA4P06727 ORC6-206ENST00000568364 888 ntTSL 5 BASIC14.7□□□□□ -0.06
APOA4P06727 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC14.7□□□□□ -0.06
APOA4P06727 AC244669.2-201ENST00000612320 853 ntBASIC14.7□□□□□ -0.06
APOA4P06727 AL162274.1-201ENST00000617191 1098 ntBASIC14.7□□□□□ -0.06
APOA4P06727 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
APOA4P06727 AC138951.2-201ENST00000623455 1161 ntBASIC14.7□□□□□ -0.06
APOA4P06727 NEAT1-201ENST00000499732 1811 ntTSL 2 BASIC14.7□□□□□ -0.06
APOA4P06727 CERS6-202ENST00000392687 6851 ntAPPRIS ALT1 TSL 1 (best) BASIC14.7□□□□□ -0.06
APOA4P06727 B3GAT1-203ENST00000524765 5737 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
APOA4P06727 IL20RA-201ENST00000316649 3485 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
APOA4P06727 ANKRD18A-201ENST00000399703 4041 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
APOA4P06727 PSMD9-207ENST00000541212 2784 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
APOA4P06727 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
APOA4P06727 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
APOA4P06727 CDYL2-203ENST00000562812 2086 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
APOA4P06727 CDYL2-204ENST00000563890 2086 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
APOA4P06727 CDYL2-205ENST00000566173 2086 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
APOA4P06727 CDH16-209ENST00000570262 2604 ntTSL 5 BASIC14.7□□□□□ -0.06
APOA4P06727 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
APOA4P06727 SC5D-201ENST00000264027 2456 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
APOA4P06727 TBC1D1-214ENST00000508802 4119 ntTSL 2 BASIC14.7□□□□□ -0.06
APOA4P06727 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
APOA4P06727 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
APOA4P06727 ABCG1-205ENST00000398449 2998 ntAPPRIS ALT1 TSL 1 (best) BASIC14.7□□□□□ -0.06
APOA4P06727 AC015712.6-201ENST00000431060 5068 ntTSL 2 BASIC14.69□□□□□ -0.06
APOA4P06727 AFDN-211ENST00000447894 5475 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
APOA4P06727 THBD-201ENST00000377103 4109 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
APOA4P06727 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
APOA4P06727 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
APOA4P06727 KDR-201ENST00000263923 5831 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
APOA4P06727 PRDM4-201ENST00000228437 4210 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
APOA4P06727 ZNF782-205ENST00000481138 4213 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
APOA4P06727 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC14.69□□□□□ -0.06
APOA4P06727 MAP2K1-201ENST00000307102 3410 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
APOA4P06727 CRCP-203ENST00000395326 3009 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
APOA4P06727 NRDC-201ENST00000352171 3691 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
APOA4P06727 UBTF-205ENST00000526094 2459 ntTSL 5 BASIC14.69□□□□□ -0.06
APOA4P06727 AMIGO2-201ENST00000266581 3763 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
APOA4P06727 SAR1A-204ENST00000373241 2996 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
APOA4P06727 AC012617.1-204ENST00000586340 2305 ntBASIC14.69□□□□□ -0.06
APOA4P06727 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
APOA4P06727 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
APOA4P06727 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
APOA4P06727 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
APOA4P06727 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
APOA4P06727 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC14.69□□□□□ -0.06
APOA4P06727 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
APOA4P06727 CD8B2-202ENST00000417670 633 ntBASIC14.69□□□□□ -0.06
APOA4P06727 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
APOA4P06727 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
APOA4P06727 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
APOA4P06727 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
APOA4P06727 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
APOA4P06727 NAA50-208ENST00000497255 789 ntTSL 5 BASIC14.69□□□□□ -0.06
APOA4P06727 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC14.69□□□□□ -0.06
APOA4P06727 KRT17P8-201ENST00000540749 863 ntBASIC14.69□□□□□ -0.06
APOA4P06727 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC14.69□□□□□ -0.06
APOA4P06727 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC14.69□□□□□ -0.06
APOA4P06727 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
APOA4P06727 AC138696.2-201ENST00000607376 223 ntBASIC14.69□□□□□ -0.06
APOA4P06727 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
APOA4P06727 ALDH3A1-201ENST00000225740 1779 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
APOA4P06727 FXYD6-207ENST00000527717 1799 ntAPPRIS P2 TSL 2 BASIC14.69□□□□□ -0.06
APOA4P06727 ELK4-202ENST00000357992 10239 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
APOA4P06727 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
APOA4P06727 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
APOA4P06727 ANKRD30BP2-201ENST00000435744 1610 ntBASIC14.69□□□□□ -0.06
APOA4P06727 AGAP9-201ENST00000452145 2387 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
APOA4P06727 ELN-203ENST00000320492 2991 ntAPPRIS ALT2 TSL 2 BASIC14.69□□□□□ -0.06
APOA4P06727 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
APOA4P06727 GNPNAT1-203ENST00000554230 2238 ntTSL 5 BASIC14.69□□□□□ -0.06
APOA4P06727 RAPH1-202ENST00000319170 9808 ntAPPRIS P4 TSL 1 (best) BASIC14.69□□□□□ -0.06
APOA4P06727 AC005324.3-201ENST00000455584 5514 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
APOA4P06727 MLLT10-201ENST00000307729 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
APOA4P06727 DNASE1L1-206ENST00000393638 2665 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
APOA4P06727 FHOD3-201ENST00000257209 4967 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
APOA4P06727 CDK20-202ENST00000336654 2176 ntTSL 2 BASIC14.68□□□□□ -0.06
APOA4P06727 CILP2-202ENST00000586018 4234 ntAPPRIS ALT1 TSL 2 BASIC14.68□□□□□ -0.06
APOA4P06727 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
APOA4P06727 MFAP4-202ENST00000395592 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
APOA4P06727 SRSF2-203ENST00000392485 2885 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
APOA4P06727 IQCE-216ENST00000611775 2289 ntAPPRIS ALT2 TSL 2 BASIC14.68□□□□□ -0.06
APOA4P06727 CSF2RB-202ENST00000403662 4863 ntAPPRIS P2 TSL 5 BASIC14.68□□□□□ -0.06
APOA4P06727 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC14.68□□□□□ -0.06
APOA4P06727 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC14.68□□□□□ -0.06
APOA4P06727 PCDHA11-201ENST00000398640 6115 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
APOA4P06727 NFATC4-207ENST00000553469 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
APOA4P06727 ALOX15-201ENST00000293761 2677 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
APOA4P06727 PIGT-203ENST00000372689 1971 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
APOA4P06727 ANGPTL8-201ENST00000252453 872 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
APOA4P06727 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
APOA4P06727 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
APOA4P06727 ARSEP1-201ENST00000420443 635 ntBASIC14.68□□□□□ -0.06
APOA4P06727 CNN2P8-201ENST00000421872 913 ntBASIC14.68□□□□□ -0.06
APOA4P06727 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
APOA4P06727 FAM8A4P-201ENST00000435433 1213 ntBASIC14.68□□□□□ -0.06
APOA4P06727 Z82198.1-201ENST00000447396 437 ntTSL 3 BASIC14.68□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 95.3 ms