Protein–RNA interactions for Protein: P05114

HMGN1, Non-histone chromosomal protein HMG-14, humanhuman

Predictions only

Length 100 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P05114 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
HMGN1P05114 AC139712.1-201ENST00000378256 1875 ntBASIC13.31□□□□□ -0.28
HMGN1P05114 PASK-204ENST00000405260 4942 ntAPPRIS P3 TSL 5 BASIC13.31□□□□□ -0.28
HMGN1P05114 SEMA4B-201ENST00000332496 3781 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
HMGN1P05114 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
HMGN1P05114 LRP5L-202ENST00000402859 1661 ntAPPRIS P2 TSL 5 BASIC13.31□□□□□ -0.28
HMGN1P05114 ZNF34-201ENST00000343459 1901 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
HMGN1P05114 ZNF34-202ENST00000429371 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
HMGN1P05114 EMC10-201ENST00000334976 9446 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
HMGN1P05114 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
HMGN1P05114 AC020915.4-201ENST00000597230 2708 ntTSL 2 BASIC13.31□□□□□ -0.28
HMGN1P05114 LARP4-201ENST00000293618 6296 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
HMGN1P05114 CDIP1-205ENST00000563332 2774 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
HMGN1P05114 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
HMGN1P05114 SHPK-201ENST00000225519 3838 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
HMGN1P05114 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
HMGN1P05114 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
HMGN1P05114 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
HMGN1P05114 ACTBP8-201ENST00000403258 1108 ntBASIC13.31□□□□□ -0.28
HMGN1P05114 OSM-203ENST00000403463 464 ntTSL 3 BASIC13.31□□□□□ -0.28
HMGN1P05114 HLA-DRB6-201ENST00000411500 1235 ntBASIC13.31□□□□□ -0.28
HMGN1P05114 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC13.31□□□□□ -0.28
HMGN1P05114 AC055876.3-201ENST00000431496 288 ntBASIC13.31□□□□□ -0.28
HMGN1P05114 FO681548.1-201ENST00000455617 1132 ntBASIC13.31□□□□□ -0.28
HMGN1P05114 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC13.31□□□□□ -0.28
HMGN1P05114 KRT18P25-201ENST00000508931 1278 ntBASIC13.31□□□□□ -0.28
HMGN1P05114 FADS2-205ENST00000517839 469 ntTSL 3 BASIC13.31□□□□□ -0.28
HMGN1P05114 REEP4-207ENST00000523293 913 ntTSL 3 BASIC13.31□□□□□ -0.28
HMGN1P05114 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC13.31□□□□□ -0.28
HMGN1P05114 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
HMGN1P05114 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
HMGN1P05114 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC13.31□□□□□ -0.28
HMGN1P05114 AC099568.2-201ENST00000609194 695 ntBASIC13.31□□□□□ -0.28
HMGN1P05114 AC138649.4-201ENST00000612222 287 ntBASIC13.31□□□□□ -0.28
HMGN1P05114 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC13.31□□□□□ -0.28
HMGN1P05114 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC13.31□□□□□ -0.28
HMGN1P05114 STK33-203ENST00000396672 2558 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
HMGN1P05114 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
HMGN1P05114 RPS6KA4-201ENST00000334205 3119 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
HMGN1P05114 ALDH1A3-202ENST00000346623 3104 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
HMGN1P05114 TMEM87A-201ENST00000307216 1598 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
HMGN1P05114 AC105206.1-202ENST00000314927 2368 ntBASIC13.31□□□□□ -0.28
HMGN1P05114 HAGLR-202ENST00000416928 4235 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
HMGN1P05114 PPM1M-201ENST00000296487 2429 ntTSL 2 BASIC13.31□□□□□ -0.28
HMGN1P05114 ATL2-210ENST00000452935 2199 ntTSL 2 BASIC13.31□□□□□ -0.28
HMGN1P05114 STK32B-201ENST00000282908 3582 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
HMGN1P05114 BAIAP3-201ENST00000324385 4678 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
HMGN1P05114 ASB3-201ENST00000263634 2214 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
HMGN1P05114 RIPOR1-204ENST00000428437 4152 ntAPPRIS ALT2 TSL 2 BASIC13.31□□□□□ -0.28
HMGN1P05114 TMEM184B-202ENST00000361906 3611 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
HMGN1P05114 FRMD4B-201ENST00000398540 5060 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
HMGN1P05114 PASK-201ENST00000234040 4572 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
HMGN1P05114 MANBA-202ENST00000505239 2577 ntTSL 2 BASIC13.3□□□□□ -0.28
HMGN1P05114 THAP2-201ENST00000308086 5719 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
HMGN1P05114 JAKMIP3-201ENST00000298622 6626 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
HMGN1P05114 MEAF6-203ENST00000373074 2005 ntTSL 2 BASIC13.3□□□□□ -0.28
HMGN1P05114 RIPOR3-202ENST00000327979 4377 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
HMGN1P05114 VCP-201ENST00000358901 4370 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
HMGN1P05114 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
HMGN1P05114 KHSRPP1-201ENST00000427983 1768 ntBASIC13.3□□□□□ -0.28
HMGN1P05114 LINC02048-201ENST00000440556 1771 ntTSL 5 BASIC13.3□□□□□ -0.28
HMGN1P05114 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
HMGN1P05114 ARMCX1-201ENST00000372829 2141 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
HMGN1P05114 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
HMGN1P05114 ANKRD36BP2-202ENST00000421951 1899 ntTSL 3 BASIC13.3□□□□□ -0.28
HMGN1P05114 PATL2-208ENST00000560780 1863 ntAPPRIS ALT2 TSL 2 BASIC13.3□□□□□ -0.28
HMGN1P05114 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
HMGN1P05114 GTF2I-215ENST00000614986 4415 ntAPPRIS ALT1 TSL 1 (best) BASIC13.3□□□□□ -0.28
HMGN1P05114 GTF2I-221ENST00000621734 4412 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
HMGN1P05114 PRKCSH-212ENST00000591462 2209 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
HMGN1P05114 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
HMGN1P05114 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
HMGN1P05114 ACKR1-201ENST00000368121 1240 ntBASIC13.3□□□□□ -0.28
HMGN1P05114 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
HMGN1P05114 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC13.3□□□□□ -0.28
HMGN1P05114 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
HMGN1P05114 AC093004.1-201ENST00000508850 424 ntBASIC13.3□□□□□ -0.28
HMGN1P05114 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC13.3□□□□□ -0.28
HMGN1P05114 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC13.3□□□□□ -0.28
HMGN1P05114 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC13.3□□□□□ -0.28
HMGN1P05114 DUX4L27-201ENST00000554796 1261 ntBASIC13.3□□□□□ -0.28
HMGN1P05114 AC124283.3-201ENST00000570869 594 ntBASIC13.3□□□□□ -0.28
HMGN1P05114 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC13.3□□□□□ -0.28
HMGN1P05114 NUTM2G-201ENST00000354649 2851 ntAPPRIS P3 TSL 5 BASIC13.3□□□□□ -0.28
HMGN1P05114 SF3A1-201ENST00000215793 5143 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
HMGN1P05114 PRSS16-203ENST00000421826 1949 ntTSL 2 BASIC13.3□□□□□ -0.28
HMGN1P05114 PPCDC-201ENST00000342932 2250 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
HMGN1P05114 ACP7-201ENST00000331256 2966 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
HMGN1P05114 CROT-203ENST00000419147 2959 ntTSL 2 BASIC13.3□□□□□ -0.28
HMGN1P05114 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
HMGN1P05114 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
HMGN1P05114 TUBB8P4-201ENST00000511806 1324 ntBASIC13.3□□□□□ -0.28
HMGN1P05114 SIRT5-203ENST00000379262 2339 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
HMGN1P05114 APBB1-203ENST00000389906 2684 ntAPPRIS ALT1 TSL 5 BASIC13.3□□□□□ -0.28
HMGN1P05114 SLC6A5-202ENST00000525748 7084 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
HMGN1P05114 TNS2-203ENST00000379902 4737 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
HMGN1P05114 TRIT1-214ENST00000537440 2026 ntTSL 5 BASIC13.3□□□□□ -0.28
HMGN1P05114 MAP3K3-203ENST00000577395 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC13.3□□□□□ -0.28
HMGN1P05114 CA12-201ENST00000178638 6413 ntAPPRIS P4 TSL 1 (best) BASIC13.3□□□□□ -0.28
HMGN1P05114 AL731571.1-201ENST00000617058 5428 ntBASIC13.3□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 60.4 ms