Protein–RNA interactions for Protein: O95628

CNOT4, CCR4-NOT transcription complex subunit 4, humanhuman

Known RBP Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4O95628 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
CNOT4O95628 FAM198B-201ENST00000296530 4985 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CNOT4O95628 FZR1-201ENST00000313639 1215 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
CNOT4O95628 LSM10-201ENST00000315732 850 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CNOT4O95628 FGF14-202ENST00000376143 744 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CNOT4O95628 C9orf24-203ENST00000379126 496 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
CNOT4O95628 AK6-201ENST00000380818 1183 ntTSL 2 BASIC13.07□□□□□ -0.32
CNOT4O95628 AL391361.3-201ENST00000420601 379 ntTSL 2 BASIC13.07□□□□□ -0.32
CNOT4O95628 PTPA-218ENST00000435132 618 ntTSL 2 BASIC13.07□□□□□ -0.32
CNOT4O95628 AC092800.1-201ENST00000449492 579 ntTSL 2 BASIC13.07□□□□□ -0.32
CNOT4O95628 SPATA24-205ENST00000509959 641 ntTSL 5 BASIC13.07□□□□□ -0.32
CNOT4O95628 IFITM1-204ENST00000528780 730 ntAPPRIS P1 TSL 3 BASIC13.07□□□□□ -0.32
CNOT4O95628 AC025154.1-201ENST00000552806 560 ntTSL 5 BASIC13.07□□□□□ -0.32
CNOT4O95628 MIR4683-201ENST00000579659 81 ntBASIC13.07□□□□□ -0.32
CNOT4O95628 AC104982.3-201ENST00000581995 514 ntBASIC13.07□□□□□ -0.32
CNOT4O95628 NAT9-222ENST00000583476 583 ntTSL 3 BASIC13.07□□□□□ -0.32
CNOT4O95628 AC005695.3-201ENST00000614522 232 ntBASIC13.07□□□□□ -0.32
CNOT4O95628 COL8A2-201ENST00000303143 4447 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
CNOT4O95628 ABHD18-206ENST00000611882 1493 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
CNOT4O95628 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC13.07□□□□□ -0.32
CNOT4O95628 TMEM87B-201ENST00000283206 5212 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
CNOT4O95628 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
CNOT4O95628 AC020910.5-201ENST00000623668 1865 ntBASIC13.07□□□□□ -0.32
CNOT4O95628 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CNOT4O95628 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CNOT4O95628 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CNOT4O95628 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC13.07□□□□□ -0.32
CNOT4O95628 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC13.07□□□□□ -0.32
CNOT4O95628 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC13.07□□□□□ -0.32
CNOT4O95628 KLHL21-201ENST00000377658 4487 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CNOT4O95628 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
CNOT4O95628 AC139749.1-202ENST00000617529 3139 ntBASIC13.07□□□□□ -0.32
CNOT4O95628 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC13.07□□□□□ -0.32
CNOT4O95628 SF1-209ENST00000433274 2317 ntTSL 2 BASIC13.07□□□□□ -0.32
CNOT4O95628 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
CNOT4O95628 MAPK4-201ENST00000400384 4770 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CNOT4O95628 ECSIT-209ENST00000591104 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
CNOT4O95628 MRPL37P1-201ENST00000592451 1337 ntBASIC13.07□□□□□ -0.32
CNOT4O95628 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
CNOT4O95628 FAM13B-201ENST00000033079 5465 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
CNOT4O95628 GRIN2C-201ENST00000293190 4261 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
CNOT4O95628 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CNOT4O95628 RGMA-203ENST00000542321 3038 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
CNOT4O95628 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
CNOT4O95628 CENPO-202ENST00000380834 4386 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
CNOT4O95628 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
CNOT4O95628 SPIN3-207ENST00000638386 4461 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
CNOT4O95628 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CNOT4O95628 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
CNOT4O95628 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC13.06□□□□□ -0.32
CNOT4O95628 ZEB1-AS1-208ENST00000607166 2503 ntBASIC13.06□□□□□ -0.32
CNOT4O95628 MLLT11-201ENST00000368921 4075 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CNOT4O95628 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
CNOT4O95628 NCOR2-202ENST00000404121 7175 ntTSL 5 BASIC13.06□□□□□ -0.32
CNOT4O95628 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
CNOT4O95628 MPLKIP-201ENST00000306984 7668 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CNOT4O95628 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC13.06□□□□□ -0.32
CNOT4O95628 AFDN-211ENST00000447894 5475 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
CNOT4O95628 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
CNOT4O95628 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CNOT4O95628 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CNOT4O95628 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CNOT4O95628 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
CNOT4O95628 GPAT2-202ENST00000434632 3061 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
CNOT4O95628 STAB1-201ENST00000321725 7928 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CNOT4O95628 NEU2-201ENST00000233840 1143 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CNOT4O95628 TMEM52-203ENST00000378602 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
CNOT4O95628 BLCAP-204ENST00000397135 685 ntAPPRIS P1 TSL 4 BASIC13.06□□□□□ -0.32
CNOT4O95628 LIMS1-206ENST00000414829 439 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
CNOT4O95628 AL021707.3-201ENST00000418803 527 ntTSL 5 BASIC13.06□□□□□ -0.32
CNOT4O95628 FGF13-204ENST00000436198 1165 ntTSL 2 BASIC13.06□□□□□ -0.32
CNOT4O95628 AL160290.2-201ENST00000448347 831 ntTSL 3 BASIC13.06□□□□□ -0.32
CNOT4O95628 LIMS3-205ENST00000487150 782 ntTSL 3 BASIC13.06□□□□□ -0.32
CNOT4O95628 PRSS30P-204ENST00000489864 650 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
CNOT4O95628 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC13.06□□□□□ -0.32
CNOT4O95628 HNRNPA1P36-201ENST00000521313 955 ntBASIC13.06□□□□□ -0.32
CNOT4O95628 AC113192.2-201ENST00000525320 308 ntTSL 3 BASIC13.06□□□□□ -0.32
CNOT4O95628 TBC1D16-203ENST00000570373 961 ntTSL 5 BASIC13.06□□□□□ -0.32
CNOT4O95628 PRCD-210ENST00000592014 462 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CNOT4O95628 IFITM3-204ENST00000602735 713 ntAPPRIS ALT1 TSL 5 BASIC13.06□□□□□ -0.32
CNOT4O95628 ARHGEF7-201ENST00000218789 5233 ntTSL 5 BASIC13.06□□□□□ -0.32
CNOT4O95628 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CNOT4O95628 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
CNOT4O95628 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
CNOT4O95628 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC13.06□□□□□ -0.32
CNOT4O95628 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC13.06□□□□□ -0.32
CNOT4O95628 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CNOT4O95628 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CNOT4O95628 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC13.06□□□□□ -0.32
CNOT4O95628 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC13.06□□□□□ -0.32
CNOT4O95628 DMBT1P1-203ENST00000636837 4628 ntBASIC13.06□□□□□ -0.32
CNOT4O95628 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CNOT4O95628 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CNOT4O95628 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CNOT4O95628 UROD-201ENST00000246337 1300 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CNOT4O95628 ARHGAP27-203ENST00000428638 4242 ntAPPRIS P2 TSL 5 BASIC13.06□□□□□ -0.32
CNOT4O95628 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC13.06□□□□□ -0.32
CNOT4O95628 AC092135.3-201ENST00000624151 1846 ntBASIC13.06□□□□□ -0.32
CNOT4O95628 AC009093.2-202ENST00000620513 2079 ntBASIC13.06□□□□□ -0.32
CNOT4O95628 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms