Protein–RNA interactions for Protein: O95503

CBX6, Chromobox protein homolog 6, humanhuman

Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX6O95503 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
CBX6O95503 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC14.67□□□□□ -0.06
CBX6O95503 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CBX6O95503 API5-203ENST00000455725 2257 ntTSL 2 BASIC14.67□□□□□ -0.06
CBX6O95503 PELP1-201ENST00000301396 3673 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
CBX6O95503 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC14.67□□□□□ -0.06
CBX6O95503 LINC00987-201ENST00000427111 2472 ntTSL 2 BASIC14.67□□□□□ -0.06
CBX6O95503 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CBX6O95503 AFAP1-203ENST00000382543 2590 ntAPPRIS ALT1 TSL 5 BASIC14.67□□□□□ -0.06
CBX6O95503 TFEB-205ENST00000394283 2595 ntTSL 2 BASIC14.67□□□□□ -0.06
CBX6O95503 SNX19-201ENST00000265909 6535 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CBX6O95503 FAM213A-205ENST00000606162 5859 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CBX6O95503 PP14571-202ENST00000404891 2017 ntTSL 2 BASIC14.67□□□□□ -0.06
CBX6O95503 MMP14-201ENST00000311852 3732 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CBX6O95503 LGALS2-201ENST00000215886 591 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CBX6O95503 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CBX6O95503 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CBX6O95503 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
CBX6O95503 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC14.67□□□□□ -0.06
CBX6O95503 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
CBX6O95503 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
CBX6O95503 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
CBX6O95503 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC14.67□□□□□ -0.06
CBX6O95503 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC14.67□□□□□ -0.06
CBX6O95503 AL356489.1-201ENST00000449144 1144 ntTSL 3 BASIC14.67□□□□□ -0.06
CBX6O95503 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CBX6O95503 ELK1P1-201ENST00000485699 580 ntBASIC14.67□□□□□ -0.06
CBX6O95503 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC14.67□□□□□ -0.06
CBX6O95503 SDHAP3-202ENST00000515467 728 ntBASIC14.67□□□□□ -0.06
CBX6O95503 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
CBX6O95503 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC14.67□□□□□ -0.06
CBX6O95503 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC14.67□□□□□ -0.06
CBX6O95503 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC14.67□□□□□ -0.06
CBX6O95503 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC14.67□□□□□ -0.06
CBX6O95503 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CBX6O95503 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC14.67□□□□□ -0.06
CBX6O95503 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
CBX6O95503 AC004461.2-201ENST00000629517 803 ntBASIC14.67□□□□□ -0.06
CBX6O95503 AL033527.4-201ENST00000641026 673 ntBASIC14.67□□□□□ -0.06
CBX6O95503 AL033527.5-202ENST00000641632 1098 ntBASIC14.67□□□□□ -0.06
CBX6O95503 CHIT1-202ENST00000367229 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CBX6O95503 OSBPL2-201ENST00000313733 4009 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CBX6O95503 KRT8P12-202ENST00000472924 1397 ntBASIC14.67□□□□□ -0.06
CBX6O95503 TCOF1-202ENST00000377797 5095 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
CBX6O95503 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC14.67□□□□□ -0.06
CBX6O95503 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CBX6O95503 MAPKBP1-215ENST00000514566 5394 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CBX6O95503 ST7L-202ENST00000358039 4528 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CBX6O95503 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CBX6O95503 BPI-201ENST00000262865 1874 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CBX6O95503 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC14.67□□□□□ -0.06
CBX6O95503 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CBX6O95503 POLD1-214ENST00000613923 3542 ntTSL 5 BASIC14.67□□□□□ -0.06
CBX6O95503 SPATA20-227ENST00000634597 2587 ntAPPRIS ALT1 TSL 5 BASIC14.67□□□□□ -0.06
CBX6O95503 SYDE1-201ENST00000342784 3264 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
CBX6O95503 E2F7-201ENST00000322886 5740 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CBX6O95503 RABEPK-201ENST00000259460 1313 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CBX6O95503 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CBX6O95503 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC14.66□□□□□ -0.06
CBX6O95503 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC14.66□□□□□ -0.06
CBX6O95503 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC14.66□□□□□ -0.06
CBX6O95503 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CBX6O95503 HFE-202ENST00000317896 1922 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CBX6O95503 STRADA-243ENST00000640086 1925 ntTSL 5 BASIC14.66□□□□□ -0.06
CBX6O95503 TRMT10B-202ENST00000377753 2027 ntTSL 2 BASIC14.66□□□□□ -0.06
CBX6O95503 RPN2-202ENST00000373622 2348 ntTSL 2 BASIC14.66□□□□□ -0.06
CBX6O95503 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
CBX6O95503 TNIP3-201ENST00000057513 2416 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
CBX6O95503 SNHG28-201ENST00000368102 2501 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
CBX6O95503 PHF2-203ENST00000610682 2921 ntTSL 5 BASIC14.66□□□□□ -0.06
CBX6O95503 FAM219A-207ENST00000379089 3624 ntAPPRIS ALT1 TSL 3 BASIC14.66□□□□□ -0.06
CBX6O95503 STK17B-201ENST00000263955 5287 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CBX6O95503 OTP-201ENST00000306422 3669 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CBX6O95503 INMT-201ENST00000013222 2559 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
CBX6O95503 ATL2-210ENST00000452935 2199 ntTSL 2 BASIC14.66□□□□□ -0.06
CBX6O95503 GOSR2-235ENST00000640269 2190 ntTSL 5 BASIC14.66□□□□□ -0.06
CBX6O95503 SIGLEC9-201ENST00000250360 1690 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
CBX6O95503 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC14.66□□□□□ -0.06
CBX6O95503 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC14.66□□□□□ -0.06
CBX6O95503 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC14.66□□□□□ -0.06
CBX6O95503 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CBX6O95503 SELENON-202ENST00000361547 4334 ntAPPRIS P4 TSL 1 (best) BASIC14.66□□□□□ -0.06
CBX6O95503 BLVRB-201ENST00000263368 873 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CBX6O95503 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CBX6O95503 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CBX6O95503 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CBX6O95503 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
CBX6O95503 ATP5J-205ENST00000400094 589 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
CBX6O95503 AC074338.1-201ENST00000416825 156 ntBASIC14.66□□□□□ -0.06
CBX6O95503 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC14.66□□□□□ -0.06
CBX6O95503 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC14.66□□□□□ -0.06
CBX6O95503 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC14.66□□□□□ -0.06
CBX6O95503 AC119751.2-201ENST00000504529 210 ntBASIC14.66□□□□□ -0.06
CBX6O95503 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC14.66□□□□□ -0.06
CBX6O95503 AC123567.1-201ENST00000548294 1261 ntBASIC14.66□□□□□ -0.06
CBX6O95503 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CBX6O95503 AC023310.3-201ENST00000557027 670 ntBASIC14.66□□□□□ -0.06
CBX6O95503 AC100756.1-201ENST00000562736 682 ntBASIC14.66□□□□□ -0.06
CBX6O95503 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC14.66□□□□□ -0.06
CBX6O95503 AC138749.3-201ENST00000567691 622 ntBASIC14.66□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 103.3 ms