Protein–RNA interactions for Protein: O95196

CSPG5, Chondroitin sulfate proteoglycan 5, humanhuman

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5O95196 LCK-206ENST00000373564 2137 ntTSL 5 BASIC15.73■□□□□ 0.11
CSPG5O95196 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CSPG5O95196 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CSPG5O95196 AC239800.3-201ENST00000424684 5243 ntTSL 5 BASIC15.72■□□□□ 0.11
CSPG5O95196 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC15.72■□□□□ 0.11
CSPG5O95196 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CSPG5O95196 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CSPG5O95196 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC15.72■□□□□ 0.11
CSPG5O95196 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC15.72■□□□□ 0.11
CSPG5O95196 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CSPG5O95196 ARV1-201ENST00000310256 1335 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CSPG5O95196 PAX5-214ENST00000523241 1342 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CSPG5O95196 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CSPG5O95196 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CSPG5O95196 SEZ6-203ENST00000360295 4306 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
CSPG5O95196 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CSPG5O95196 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
CSPG5O95196 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CSPG5O95196 DCHS1-201ENST00000299441 10765 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CSPG5O95196 AL009178.2-201ENST00000597278 2719 ntBASIC15.72■□□□□ 0.11
CSPG5O95196 UBR5-212ENST00000521922 9008 ntAPPRIS ALT1 TSL 5 BASIC15.72■□□□□ 0.11
CSPG5O95196 SLC25A20-202ENST00000430379 1576 ntTSL 3 BASIC15.72■□□□□ 0.11
CSPG5O95196 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CSPG5O95196 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CSPG5O95196 RPS9-204ENST00000391753 709 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CSPG5O95196 CHCHD2-201ENST00000395422 901 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CSPG5O95196 AL591242.1-203ENST00000434329 374 ntTSL 3 BASIC15.72■□□□□ 0.11
CSPG5O95196 HLA-DQB2-232ENST00000437316 1214 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
CSPG5O95196 AL080250.1-201ENST00000438676 445 ntTSL 5 BASIC15.72■□□□□ 0.11
CSPG5O95196 PPFIBP1-204ENST00000535047 875 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CSPG5O95196 ERVK13-1-204ENST00000566343 567 ntTSL 4 BASIC15.72■□□□□ 0.11
CSPG5O95196 GFER-204ENST00000567719 483 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CSPG5O95196 RPL17P45-201ENST00000586289 509 ntBASIC15.72■□□□□ 0.11
CSPG5O95196 AC011462.2-201ENST00000598887 344 ntTSL 5 BASIC15.72■□□□□ 0.11
CSPG5O95196 ZNF350-AS1-202ENST00000600253 577 ntTSL 4 BASIC15.72■□□□□ 0.11
CSPG5O95196 GMFG-209ENST00000600322 622 ntTSL 5 BASIC15.72■□□□□ 0.11
CSPG5O95196 DDX5-235ENST00000630471 473 ntTSL 4 BASIC15.72■□□□□ 0.11
CSPG5O95196 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CSPG5O95196 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CSPG5O95196 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CSPG5O95196 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CSPG5O95196 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC15.72■□□□□ 0.11
CSPG5O95196 LILRP1-201ENST00000444199 1370 ntBASIC15.72■□□□□ 0.11
CSPG5O95196 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
CSPG5O95196 ZNF333-209ENST00000601134 1392 ntTSL 5 BASIC15.72■□□□□ 0.11
CSPG5O95196 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CSPG5O95196 SETD1B-203ENST00000604567 5969 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
CSPG5O95196 LINC01165-201ENST00000445190 1623 ntBASIC15.72■□□□□ 0.11
CSPG5O95196 ARHGEF5-201ENST00000056217 5544 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
CSPG5O95196 OSBPL1A-201ENST00000319481 4195 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CSPG5O95196 AC012508.2-201ENST00000567613 1472 ntBASIC15.71■□□□□ 0.11
CSPG5O95196 AC003102.2-201ENST00000589195 1469 ntBASIC15.71■□□□□ 0.11
CSPG5O95196 AMHR2-201ENST00000257863 1863 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
CSPG5O95196 C16orf45-209ENST00000566490 1854 ntTSL 5 BASIC15.71■□□□□ 0.11
CSPG5O95196 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CSPG5O95196 VAPA-202ENST00000400000 6815 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CSPG5O95196 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
CSPG5O95196 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
CSPG5O95196 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
CSPG5O95196 AP000845.1-201ENST00000581677 2131 ntBASIC15.71■□□□□ 0.11
CSPG5O95196 HS3ST5-201ENST00000312719 3901 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
CSPG5O95196 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
CSPG5O95196 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
CSPG5O95196 SVOPL-201ENST00000288513 1413 ntTSL 2 BASIC15.71■□□□□ 0.11
CSPG5O95196 SEPT7-202ENST00000399034 4399 ntTSL 5 BASIC15.71■□□□□ 0.11
CSPG5O95196 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CSPG5O95196 ALCAM-201ENST00000306107 4701 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CSPG5O95196 KIAA1161-201ENST00000297625 6398 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CSPG5O95196 GEMIN7-202ENST00000391951 716 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
CSPG5O95196 MIR4435-2HG-204ENST00000419736 777 ntTSL 3 BASIC15.71■□□□□ 0.11
CSPG5O95196 AL391361.3-201ENST00000420601 379 ntTSL 2 BASIC15.71■□□□□ 0.11
CSPG5O95196 LINC00431-201ENST00000440735 1189 ntTSL 5 BASIC15.71■□□□□ 0.11
CSPG5O95196 AC018463.1-201ENST00000456674 917 ntBASIC15.71■□□□□ 0.11
CSPG5O95196 FAM104A-206ENST00000583024 417 ntTSL 3 BASIC15.71■□□□□ 0.11
CSPG5O95196 IRF3-225ENST00000600022 882 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CSPG5O95196 AC027601.3-201ENST00000622907 509 ntBASIC15.71■□□□□ 0.11
CSPG5O95196 API5-202ENST00000420461 2009 ntTSL 2 BASIC15.71■□□□□ 0.11
CSPG5O95196 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC15.71■□□□□ 0.11
CSPG5O95196 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CSPG5O95196 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CSPG5O95196 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
CSPG5O95196 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
CSPG5O95196 SNRPN-203ENST00000400097 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CSPG5O95196 FAM168A-204ENST00000450446 1364 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CSPG5O95196 AC023090.2-201ENST00000625182 2110 ntBASIC15.71■□□□□ 0.11
CSPG5O95196 KDM6B-201ENST00000254846 6713 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
CSPG5O95196 NLRX1-204ENST00000409991 3716 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CSPG5O95196 SLC6A5-202ENST00000525748 7084 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CSPG5O95196 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
CSPG5O95196 CACNA1G-208ENST00000442258 7226 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.1
CSPG5O95196 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC15.71■□□□□ 0.1
CSPG5O95196 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CSPG5O95196 EIF4G3-204ENST00000374935 5567 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
CSPG5O95196 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CSPG5O95196 AC245100.1-201ENST00000452996 1331 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CSPG5O95196 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC15.7■□□□□ 0.1
CSPG5O95196 PRKY-203ENST00000528056 7218 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CSPG5O95196 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CSPG5O95196 THBS2-206ENST00000617924 5280 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CSPG5O95196 SMAD2-202ENST00000356825 10445 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 57.5 ms