Protein–RNA interactions for Protein: O95096

NKX2-2, Homeobox protein Nkx-2.2, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-2O95096 PRMT7-202ENST00000441236 2204 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
NKX2-2O95096 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
NKX2-2O95096 NT5C3A-213ENST00000610140 1670 ntAPPRIS ALT1 TSL 1 (best) BASIC13.44□□□□□ -0.26
NKX2-2O95096 AC144522.1-201ENST00000625111 1658 ntBASIC13.44□□□□□ -0.26
NKX2-2O95096 PRIMPOL-211ENST00000515774 2007 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
NKX2-2O95096 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC13.44□□□□□ -0.26
NKX2-2O95096 CNOT3-201ENST00000221232 2852 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
NKX2-2O95096 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC13.44□□□□□ -0.26
NKX2-2O95096 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC13.44□□□□□ -0.26
NKX2-2O95096 GGACT-201ENST00000376250 2804 ntAPPRIS P1 TSL 3 BASIC13.44□□□□□ -0.26
NKX2-2O95096 AC109466.1-209ENST00000486913 1618 ntTSL 2 BASIC13.44□□□□□ -0.26
NKX2-2O95096 MRPL34-201ENST00000252602 968 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
NKX2-2O95096 ETV2-201ENST00000379023 926 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
NKX2-2O95096 BX284668.5-201ENST00000422124 406 ntTSL 2 BASIC13.44□□□□□ -0.26
NKX2-2O95096 RARG-203ENST00000425354 2959 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
NKX2-2O95096 RNF144A-AS1-203ENST00000426122 579 ntTSL 4 BASIC13.44□□□□□ -0.26
NKX2-2O95096 KLK4-202ENST00000431178 481 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
NKX2-2O95096 TUBB8P8-201ENST00000458717 1058 ntBASIC13.44□□□□□ -0.26
NKX2-2O95096 FAM86HP-204ENST00000513466 959 ntBASIC13.44□□□□□ -0.26
NKX2-2O95096 AC011773.1-201ENST00000520129 468 ntTSL 5 BASIC13.44□□□□□ -0.26
NKX2-2O95096 OSGIN2-203ENST00000520659 801 ntTSL 2 BASIC13.44□□□□□ -0.26
NKX2-2O95096 SNHG9-201ENST00000531523 275 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
NKX2-2O95096 AL583810.1-201ENST00000553344 1045 ntBASIC13.44□□□□□ -0.26
NKX2-2O95096 AL160314.3-201ENST00000556041 767 ntBASIC13.44□□□□□ -0.26
NKX2-2O95096 AP002360.2-202ENST00000572035 738 ntTSL 3 BASIC13.44□□□□□ -0.26
NKX2-2O95096 CRHR1-208ENST00000577353 1206 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
NKX2-2O95096 AC129510.1-201ENST00000579979 555 ntTSL 3 BASIC13.44□□□□□ -0.26
NKX2-2O95096 DRG2-220ENST00000583355 891 ntTSL 3 BASIC13.44□□□□□ -0.26
NKX2-2O95096 AC005962.1-201ENST00000584100 773 ntBASIC13.44□□□□□ -0.26
NKX2-2O95096 AC008403.1-201ENST00000595676 443 ntAPPRIS P1 TSL 2 BASIC13.44□□□□□ -0.26
NKX2-2O95096 AC008537.4-201ENST00000595728 1103 ntTSL 5 BASIC13.44□□□□□ -0.26
NKX2-2O95096 AC011495.3-201ENST00000596472 427 ntTSL 2 BASIC13.44□□□□□ -0.26
NKX2-2O95096 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
NKX2-2O95096 MAGEA4-202ENST00000360243 1773 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
NKX2-2O95096 MAGEA4-203ENST00000370335 1773 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
NKX2-2O95096 MAGEA4-204ENST00000370340 1773 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
NKX2-2O95096 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC13.44□□□□□ -0.26
NKX2-2O95096 MAN1B1-202ENST00000371589 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
NKX2-2O95096 RNF167-201ENST00000262482 1915 ntAPPRIS P3 TSL 2 BASIC13.44□□□□□ -0.26
NKX2-2O95096 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC13.44□□□□□ -0.26
NKX2-2O95096 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
NKX2-2O95096 TRMT1-217ENST00000592062 2579 ntAPPRIS P3 TSL 5 BASIC13.44□□□□□ -0.26
NKX2-2O95096 CEP135-202ENST00000422247 2092 ntTSL 2 BASIC13.44□□□□□ -0.26
NKX2-2O95096 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
NKX2-2O95096 CDK3-201ENST00000425876 1582 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
NKX2-2O95096 CDK3-202ENST00000448471 1570 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
NKX2-2O95096 NRP2-205ENST00000412873 2730 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
NKX2-2O95096 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
NKX2-2O95096 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC13.44□□□□□ -0.26
NKX2-2O95096 ENDOD1-201ENST00000278505 4687 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
NKX2-2O95096 BAIAP2-220ENST00000575712 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
NKX2-2O95096 KCNT1-207ENST00000487664 3845 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
NKX2-2O95096 KIR3DL2-201ENST00000270442 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
NKX2-2O95096 AL589669.1-201ENST00000639829 1506 ntTSL 5 BASIC13.44□□□□□ -0.26
NKX2-2O95096 TATDN3-201ENST00000366973 2321 ntAPPRIS ALT1 TSL 1 (best) BASIC13.44□□□□□ -0.26
NKX2-2O95096 AFAP1L1-205ENST00000515000 2319 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
NKX2-2O95096 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
NKX2-2O95096 MAP2K1-201ENST00000307102 3410 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
NKX2-2O95096 MPZL1-203ENST00000392121 3421 ntTSL 2 BASIC13.44□□□□□ -0.26
NKX2-2O95096 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC13.43□□□□□ -0.26
NKX2-2O95096 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
NKX2-2O95096 AP4M1-201ENST00000359593 1817 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
NKX2-2O95096 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC13.43□□□□□ -0.26
NKX2-2O95096 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC13.43□□□□□ -0.26
NKX2-2O95096 DDC-213ENST00000617822 1809 ntTSL 3 BASIC13.43□□□□□ -0.26
NKX2-2O95096 PPIL6-202ENST00000424445 4031 ntTSL 5 BASIC13.43□□□□□ -0.26
NKX2-2O95096 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC13.43□□□□□ -0.26
NKX2-2O95096 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC13.43□□□□□ -0.26
NKX2-2O95096 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
NKX2-2O95096 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC13.43□□□□□ -0.26
NKX2-2O95096 FAM76A-203ENST00000373949 2273 ntTSL 2 BASIC13.43□□□□□ -0.26
NKX2-2O95096 PPIL2-202ENST00000398831 2574 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
NKX2-2O95096 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC13.43□□□□□ -0.26
NKX2-2O95096 CCT7-201ENST00000258091 1916 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
NKX2-2O95096 CYB5D2-201ENST00000301391 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
NKX2-2O95096 DBNDD1-203ENST00000392973 2689 ntTSL 2 BASIC13.43□□□□□ -0.26
NKX2-2O95096 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
NKX2-2O95096 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
NKX2-2O95096 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
NKX2-2O95096 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
NKX2-2O95096 XPNPEP1-201ENST00000322238 2467 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
NKX2-2O95096 KRTAP19-5-201ENST00000334151 461 ntAPPRIS P1 BASIC13.43□□□□□ -0.26
NKX2-2O95096 IL6R-201ENST00000344086 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
NKX2-2O95096 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
NKX2-2O95096 EDN2-201ENST00000372587 1241 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
NKX2-2O95096 PRTFDC1-202ENST00000376376 741 ntTSL 2 BASIC13.43□□□□□ -0.26
NKX2-2O95096 SLC18A1-203ENST00000381608 1419 ntTSL 5 BASIC13.43□□□□□ -0.26
NKX2-2O95096 CD8B-204ENST00000393759 1096 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
NKX2-2O95096 ANKRD13B-201ENST00000394859 3214 ntAPPRIS P1 TSL 2 BASIC13.43□□□□□ -0.26
NKX2-2O95096 MIR663B-201ENST00000408361 115 ntBASIC13.43□□□□□ -0.26
NKX2-2O95096 BTBD6P1-201ENST00000412176 1267 ntBASIC13.43□□□□□ -0.26
NKX2-2O95096 AL009181.1-201ENST00000418471 1085 ntTSL 5 BASIC13.43□□□□□ -0.26
NKX2-2O95096 AL451065.1-201ENST00000428958 238 ntTSL 5 BASIC13.43□□□□□ -0.26
NKX2-2O95096 GOLGA2P4-201ENST00000441462 777 ntBASIC13.43□□□□□ -0.26
NKX2-2O95096 RPL13AP20-201ENST00000459725 609 ntBASIC13.43□□□□□ -0.26
NKX2-2O95096 ATP6V0CP2-201ENST00000469409 207 ntBASIC13.43□□□□□ -0.26
NKX2-2O95096 AC006122.1-201ENST00000493323 440 ntBASIC13.43□□□□□ -0.26
NKX2-2O95096 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC13.43□□□□□ -0.26
NKX2-2O95096 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC13.43□□□□□ -0.26
NKX2-2O95096 AC139099.3-201ENST00000572850 472 ntTSL 5 BASIC13.43□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 37 ms