Protein–RNA interactions for Protein: O75841

UPK1B, Uroplakin-1b, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1BO75841 RTN3-210ENST00000540798 3124 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
UPK1BO75841 AC092139.4-201ENST00000624318 2794 ntBASIC12.71□□□□□ -0.37
UPK1BO75841 SHC1P1-201ENST00000425230 1745 ntBASIC12.71□□□□□ -0.37
UPK1BO75841 ENG-201ENST00000344849 3059 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
UPK1BO75841 LAIR1-204ENST00000391743 2735 ntAPPRIS ALT2 TSL 2 BASIC12.71□□□□□ -0.37
UPK1BO75841 AC068580.3-201ENST00000449248 2015 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
UPK1BO75841 INCENP-201ENST00000278849 3698 ntAPPRIS P3 TSL 5 BASIC12.71□□□□□ -0.37
UPK1BO75841 AC015712.2-201ENST00000560351 3688 ntTSL 2 BASIC12.71□□□□□ -0.37
UPK1BO75841 CASC4-201ENST00000299957 3962 ntAPPRIS P4 TSL 1 (best) BASIC12.71□□□□□ -0.37
UPK1BO75841 ARAP3-203ENST00000508305 4927 ntTSL 2 BASIC12.71□□□□□ -0.37
UPK1BO75841 FUT8-203ENST00000360689 5166 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
UPK1BO75841 UAP1L1-201ENST00000360271 3201 ntTSL 2 BASIC12.71□□□□□ -0.37
UPK1BO75841 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
UPK1BO75841 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
UPK1BO75841 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC12.71□□□□□ -0.37
UPK1BO75841 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC12.71□□□□□ -0.37
UPK1BO75841 MOK-208ENST00000519058 917 ntTSL 2 BASIC12.71□□□□□ -0.37
UPK1BO75841 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC12.71□□□□□ -0.37
UPK1BO75841 LTBR-211ENST00000543190 785 ntTSL 3 BASIC12.71□□□□□ -0.37
UPK1BO75841 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC12.71□□□□□ -0.37
UPK1BO75841 MAX-210ENST00000555419 765 ntTSL 5 BASIC12.71□□□□□ -0.37
UPK1BO75841 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC12.71□□□□□ -0.37
UPK1BO75841 RPS15-202ENST00000585665 467 ntTSL 3 BASIC12.71□□□□□ -0.37
UPK1BO75841 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
UPK1BO75841 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
UPK1BO75841 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC12.71□□□□□ -0.37
UPK1BO75841 UHMK1-203ENST00000538489 8446 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
UPK1BO75841 STX16-NPEPL1-202ENST00000530122 3433 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
UPK1BO75841 NEU3-204ENST00000531509 2468 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
UPK1BO75841 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
UPK1BO75841 LINC02486-201ENST00000604157 3000 ntBASIC12.71□□□□□ -0.38
UPK1BO75841 C9orf47-203ENST00000375851 4837 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
UPK1BO75841 OSBPL2-203ENST00000439951 3886 ntTSL 5 BASIC12.71□□□□□ -0.38
UPK1BO75841 NMRAL2P-204ENST00000423298 1792 ntTSL 5 BASIC12.71□□□□□ -0.38
UPK1BO75841 CACNA2D1-202ENST00000356860 7563 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
UPK1BO75841 SYTL4-201ENST00000263033 2335 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.38
UPK1BO75841 RAB18-208ENST00000611151 4931 ntTSL 5 BASIC12.71□□□□□ -0.38
UPK1BO75841 SLC9A8-201ENST00000361573 6094 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
UPK1BO75841 HK2-201ENST00000290573 5772 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
UPK1BO75841 ALPK3-201ENST00000258888 10917 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
UPK1BO75841 CELSR1-201ENST00000262738 11389 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
UPK1BO75841 WHRN-201ENST00000265134 2847 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
UPK1BO75841 MYRF-202ENST00000278836 5927 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
UPK1BO75841 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
UPK1BO75841 PPT1-205ENST00000449045 1957 ntTSL 2 BASIC12.7□□□□□ -0.38
UPK1BO75841 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC12.7□□□□□ -0.38
UPK1BO75841 PGM1-202ENST00000371084 2472 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
UPK1BO75841 EPHB1-201ENST00000398015 4672 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
UPK1BO75841 RCAN2-204ENST00000405162 2457 ntTSL 5 BASIC12.7□□□□□ -0.38
UPK1BO75841 ZNF239-205ENST00000535642 1904 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
UPK1BO75841 DRD2-208ENST00000542968 2467 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
UPK1BO75841 TRIM56-201ENST00000306085 10952 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
UPK1BO75841 FLT4-212ENST00000619105 3806 ntTSL 5 BASIC12.7□□□□□ -0.38
UPK1BO75841 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
UPK1BO75841 GNPDA1-210ENST00000508177 2980 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
UPK1BO75841 DSE-201ENST00000331677 7237 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
UPK1BO75841 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC12.7□□□□□ -0.38
UPK1BO75841 NLRP2-202ENST00000339757 3422 ntAPPRIS ALT2 TSL 2 BASIC12.7□□□□□ -0.38
UPK1BO75841 TSN-201ENST00000389682 3420 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
UPK1BO75841 MAT2B-204ENST00000518095 3409 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
UPK1BO75841 PIGG-205ENST00000503111 2629 ntTSL 2 BASIC12.7□□□□□ -0.38
UPK1BO75841 ITPR2-202ENST00000381340 11405 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
UPK1BO75841 RC3H2-205ENST00000423239 3623 ntTSL 5 BASIC12.7□□□□□ -0.38
UPK1BO75841 PPP2R5E-201ENST00000337537 6659 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
UPK1BO75841 RALGAPA1-201ENST00000307138 7911 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
UPK1BO75841 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
UPK1BO75841 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
UPK1BO75841 RHOQP3-201ENST00000437982 621 ntBASIC12.7□□□□□ -0.38
UPK1BO75841 AK2P2-201ENST00000439142 405 ntBASIC12.7□□□□□ -0.38
UPK1BO75841 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC12.7□□□□□ -0.38
UPK1BO75841 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC12.7□□□□□ -0.38
UPK1BO75841 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC12.7□□□□□ -0.38
UPK1BO75841 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC12.7□□□□□ -0.38
UPK1BO75841 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC12.7□□□□□ -0.38
UPK1BO75841 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
UPK1BO75841 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC12.7□□□□□ -0.38
UPK1BO75841 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC12.7□□□□□ -0.38
UPK1BO75841 AC105339.3-201ENST00000560043 636 ntBASIC12.7□□□□□ -0.38
UPK1BO75841 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC12.7□□□□□ -0.38
UPK1BO75841 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC12.7□□□□□ -0.38
UPK1BO75841 INO80C-210ENST00000590757 595 ntTSL 2 BASIC12.7□□□□□ -0.38
UPK1BO75841 KLK3-207ENST00000595952 969 ntTSL 3 BASIC12.7□□□□□ -0.38
UPK1BO75841 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC12.7□□□□□ -0.38
UPK1BO75841 AC116407.4-201ENST00000623319 1061 ntBASIC12.7□□□□□ -0.38
UPK1BO75841 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC12.7□□□□□ -0.38
UPK1BO75841 TNNI1-201ENST00000336092 1750 ntAPPRIS P2 TSL 5 BASIC12.7□□□□□ -0.38
UPK1BO75841 TXLNA-201ENST00000373609 5012 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
UPK1BO75841 SHC1-202ENST00000368445 3472 ntAPPRIS ALT1 TSL 1 (best) BASIC12.7□□□□□ -0.38
UPK1BO75841 POU2F2-202ENST00000389341 6901 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
UPK1BO75841 TMEM192-203ENST00000506087 2225 ntTSL 2 BASIC12.7□□□□□ -0.38
UPK1BO75841 AC013472.1-203ENST00000380387 1966 ntTSL 4 BASIC12.7□□□□□ -0.38
UPK1BO75841 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
UPK1BO75841 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
UPK1BO75841 MED25-212ENST00000618715 1467 ntTSL 5 BASIC12.7□□□□□ -0.38
UPK1BO75841 BRD1-201ENST00000216267 4614 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
UPK1BO75841 TJAP1-205ENST00000372452 2665 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
UPK1BO75841 EFHC1-221ENST00000636489 2421 ntTSL 5 BASIC12.7□□□□□ -0.38
UPK1BO75841 SNX22-201ENST00000325881 3614 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
UPK1BO75841 TRIM11-204ENST00000493030 5774 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
UPK1BO75841 CX3CL1-204ENST00000565912 5796 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 47.4 ms