Protein–RNA interactions for Protein: O43837

IDH3B, Isocitrate dehydrogenase [NAD] subunit beta, mitochondrial, humanhuman

Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IDH3BO43837 DYNC1I2-203ENST00000409197 2572 ntAPPRIS P4 TSL 1 (best) BASIC13.54□□□□□ -0.24
IDH3BO43837 DYNC1I2-206ENST00000409773 2583 ntTSL 2 BASIC13.54□□□□□ -0.24
IDH3BO43837 TCF3-201ENST00000262965 4451 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
IDH3BO43837 DLX1-201ENST00000341900 2130 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
IDH3BO43837 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
IDH3BO43837 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
IDH3BO43837 FOXD4L5-201ENST00000377420 3109 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
IDH3BO43837 GCKR-201ENST00000264717 2186 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
IDH3BO43837 CNTNAP1-201ENST00000264638 5276 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
IDH3BO43837 COL2A1-201ENST00000337299 4257 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
IDH3BO43837 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
IDH3BO43837 MYO1C-218ENST00000575158 4804 ntAPPRIS P3 TSL 5 BASIC13.54□□□□□ -0.24
IDH3BO43837 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
IDH3BO43837 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
IDH3BO43837 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
IDH3BO43837 CES3-201ENST00000303334 3834 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
IDH3BO43837 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
IDH3BO43837 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
IDH3BO43837 B9D1-203ENST00000395615 805 ntTSL 3 BASIC13.54□□□□□ -0.24
IDH3BO43837 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC13.54□□□□□ -0.24
IDH3BO43837 AL139094.1-201ENST00000405549 1188 ntBASIC13.54□□□□□ -0.24
IDH3BO43837 HLA-DRB6-201ENST00000411500 1235 ntBASIC13.54□□□□□ -0.24
IDH3BO43837 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
IDH3BO43837 AC004890.2-204ENST00000481968 304 ntBASIC13.54□□□□□ -0.24
IDH3BO43837 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC13.54□□□□□ -0.24
IDH3BO43837 AC022447.6-201ENST00000515522 438 ntBASIC13.54□□□□□ -0.24
IDH3BO43837 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC13.54□□□□□ -0.24
IDH3BO43837 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC13.54□□□□□ -0.24
IDH3BO43837 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC13.54□□□□□ -0.24
IDH3BO43837 STOM-203ENST00000538954 1257 ntTSL 5 BASIC13.54□□□□□ -0.24
IDH3BO43837 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC13.54□□□□□ -0.24
IDH3BO43837 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC13.54□□□□□ -0.24
IDH3BO43837 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC13.54□□□□□ -0.24
IDH3BO43837 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC13.54□□□□□ -0.24
IDH3BO43837 AC004840.1-201ENST00000636359 365 ntBASIC13.54□□□□□ -0.24
IDH3BO43837 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC13.54□□□□□ -0.24
IDH3BO43837 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC13.54□□□□□ -0.24
IDH3BO43837 CCDC57-203ENST00000392343 2896 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
IDH3BO43837 SPHK2-206ENST00000598088 2866 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
IDH3BO43837 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
IDH3BO43837 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
IDH3BO43837 TTK-201ENST00000230510 3477 ntAPPRIS ALT2 TSL 2 BASIC13.54□□□□□ -0.24
IDH3BO43837 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
IDH3BO43837 ELN-203ENST00000320492 2991 ntAPPRIS ALT2 TSL 2 BASIC13.54□□□□□ -0.24
IDH3BO43837 SON-203ENST00000381679 7860 ntTSL 5 BASIC13.54□□□□□ -0.24
IDH3BO43837 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
IDH3BO43837 NTSR1-201ENST00000370501 4132 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
IDH3BO43837 NFATC2-202ENST00000396009 7437 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
IDH3BO43837 NCBP2-204ENST00000427641 1946 ntTSL 2 BASIC13.54□□□□□ -0.24
IDH3BO43837 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
IDH3BO43837 MAPKAP1-204ENST00000373498 3131 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
IDH3BO43837 GULP1-207ENST00000409843 2643 ntAPPRIS ALT1 TSL 2 BASIC13.54□□□□□ -0.24
IDH3BO43837 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
IDH3BO43837 CCDC43-203ENST00000588210 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC13.54□□□□□ -0.24
IDH3BO43837 POU6F1-208ENST00000550824 2664 ntTSL 5 BASIC13.54□□□□□ -0.24
IDH3BO43837 TDP2-201ENST00000341060 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
IDH3BO43837 PWWP2A-202ENST00000456329 3991 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
IDH3BO43837 COL18A1-AS1-201ENST00000397787 3425 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
IDH3BO43837 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
IDH3BO43837 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
IDH3BO43837 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC13.53□□□□□ -0.24
IDH3BO43837 POLD1-214ENST00000613923 3542 ntTSL 5 BASIC13.53□□□□□ -0.24
IDH3BO43837 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
IDH3BO43837 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC13.53□□□□□ -0.24
IDH3BO43837 USP33-202ENST00000370792 2917 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
IDH3BO43837 GPRASP1-202ENST00000415986 5877 ntAPPRIS P1 TSL 4 BASIC13.53□□□□□ -0.24
IDH3BO43837 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
IDH3BO43837 MAP7D3-201ENST00000316077 4567 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
IDH3BO43837 PNMA5-205ENST00000535214 3198 ntAPPRIS P2 TSL 3 BASIC13.53□□□□□ -0.24
IDH3BO43837 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC13.53□□□□□ -0.24
IDH3BO43837 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC13.53□□□□□ -0.24
IDH3BO43837 SHROOM1-203ENST00000378679 4019 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
IDH3BO43837 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
IDH3BO43837 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
IDH3BO43837 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC13.53□□□□□ -0.24
IDH3BO43837 PATL2-207ENST00000560775 1913 ntAPPRIS P3 TSL 5 BASIC13.53□□□□□ -0.24
IDH3BO43837 PHTF2-206ENST00000422959 3525 ntAPPRIS P4 TSL 5 BASIC13.53□□□□□ -0.24
IDH3BO43837 EPS8L3-202ENST00000361965 1971 ntAPPRIS ALT1 TSL 1 (best) BASIC13.53□□□□□ -0.24
IDH3BO43837 MCHR1-201ENST00000249016 2851 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
IDH3BO43837 SUGP2-203ENST00000452918 6176 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
IDH3BO43837 AGGF1P1-201ENST00000509500 2073 ntBASIC13.53□□□□□ -0.24
IDH3BO43837 CAND2-204ENST00000456430 4573 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
IDH3BO43837 TPM3P9-201ENST00000424846 2920 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
IDH3BO43837 SPHK2-201ENST00000245222 2963 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
IDH3BO43837 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
IDH3BO43837 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
IDH3BO43837 TEX30-203ENST00000376022 828 ntTSL 2 BASIC13.53□□□□□ -0.24
IDH3BO43837 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
IDH3BO43837 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC13.53□□□□□ -0.24
IDH3BO43837 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
IDH3BO43837 URGCP-206ENST00000446958 365 ntTSL 2 BASIC13.53□□□□□ -0.24
IDH3BO43837 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC13.53□□□□□ -0.24
IDH3BO43837 AL512638.1-201ENST00000457493 794 ntBASIC13.53□□□□□ -0.24
IDH3BO43837 VDAC1P7-201ENST00000462417 847 ntBASIC13.53□□□□□ -0.24
IDH3BO43837 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC13.53□□□□□ -0.24
IDH3BO43837 TPRX2P-201ENST00000535362 881 ntBASIC13.53□□□□□ -0.24
IDH3BO43837 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
IDH3BO43837 DUX4L27-201ENST00000554796 1261 ntBASIC13.53□□□□□ -0.24
IDH3BO43837 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC13.53□□□□□ -0.24
IDH3BO43837 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC13.53□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 50 ms