Protein–RNA interactions for Protein: O43347

MSI1, RNA-binding protein Musashi homolog 1, humanhuman

Known RBP Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSI1O43347 AL357558.1-201ENST00000416646 456 ntTSL 2 BASIC15.15■□□□□ 0.02
MSI1O43347 CALR4P-201ENST00000431943 946 ntBASIC15.15■□□□□ 0.02
MSI1O43347 AC005077.2-201ENST00000449786 690 ntBASIC15.15■□□□□ 0.02
MSI1O43347 REEP1-202ENST00000453231 940 ntTSL 2 BASIC15.15■□□□□ 0.02
MSI1O43347 RCC2P8-201ENST00000502779 1035 ntBASIC15.15■□□□□ 0.02
MSI1O43347 FADS2-212ENST00000522639 360 ntTSL 5 BASIC15.15■□□□□ 0.02
MSI1O43347 AC007406.3-201ENST00000537295 1063 ntTSL 2 BASIC15.15■□□□□ 0.02
MSI1O43347 MSRB3-209ENST00000540804 884 ntTSL 2 BASIC15.15■□□□□ 0.02
MSI1O43347 SEC23A-204ENST00000548032 907 ntTSL 2 BASIC15.15■□□□□ 0.02
MSI1O43347 AL928654.3-201ENST00000552675 445 ntTSL 3 BASIC15.15■□□□□ 0.02
MSI1O43347 SORD2P-201ENST00000558556 1069 ntBASIC15.15■□□□□ 0.02
MSI1O43347 SYT17-208ENST00000568433 812 ntTSL 3 BASIC15.15■□□□□ 0.02
MSI1O43347 FADS2-215ENST00000574708 385 ntTSL 3 BASIC15.15■□□□□ 0.02
MSI1O43347 IFT20-214ENST00000585089 1071 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
MSI1O43347 LGALS3BP-202ENST00000585407 936 ntTSL 2 BASIC15.15■□□□□ 0.02
MSI1O43347 NDUFV2P1-201ENST00000596415 907 ntBASIC15.15■□□□□ 0.02
MSI1O43347 AL132994.2-201ENST00000603120 687 ntBASIC15.15■□□□□ 0.02
MSI1O43347 AL137026.1-201ENST00000624407 503 ntTSL 4 BASIC15.15■□□□□ 0.02
MSI1O43347 AL139099.5-201ENST00000635274 300 ntBASIC15.15■□□□□ 0.02
MSI1O43347 MBD3L2B-202ENST00000637800 774 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
MSI1O43347 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
MSI1O43347 SYBU-207ENST00000433638 3104 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
MSI1O43347 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
MSI1O43347 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
MSI1O43347 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
MSI1O43347 AC090099.1-203ENST00000527059 2945 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
MSI1O43347 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
MSI1O43347 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
MSI1O43347 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC15.15■□□□□ 0.02
MSI1O43347 AC012617.1-204ENST00000586340 2305 ntBASIC15.15■□□□□ 0.02
MSI1O43347 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
MSI1O43347 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
MSI1O43347 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
MSI1O43347 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
MSI1O43347 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
MSI1O43347 AC018629.1-201ENST00000623381 1736 ntBASIC15.14■□□□□ 0.01
MSI1O43347 RAN-210ENST00000541630 1475 ntTSL 2 BASIC15.14■□□□□ 0.01
MSI1O43347 GATB-201ENST00000263985 2385 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
MSI1O43347 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
MSI1O43347 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
MSI1O43347 PNPLA5-201ENST00000216177 2539 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
MSI1O43347 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
MSI1O43347 TNN-203ENST00000622870 3719 ntTSL 5 BASIC15.14■□□□□ 0.01
MSI1O43347 ID2-203ENST00000396290 1362 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
MSI1O43347 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC15.14■□□□□ 0.01
MSI1O43347 MIR600HG-201ENST00000449175 5984 ntBASIC15.14■□□□□ 0.01
MSI1O43347 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
MSI1O43347 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
MSI1O43347 AL133338.1-201ENST00000565695 1517 ntBASIC15.14■□□□□ 0.01
MSI1O43347 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
MSI1O43347 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC15.14■□□□□ 0.01
MSI1O43347 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
MSI1O43347 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC15.14■□□□□ 0.01
MSI1O43347 TEX13B-201ENST00000302917 1248 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
MSI1O43347 FCGR1B-203ENST00000369384 1044 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
MSI1O43347 NRM-202ENST00000376420 1228 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
MSI1O43347 SEPT12-202ENST00000396693 1156 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
MSI1O43347 ACTG1P2-201ENST00000415776 1125 ntBASIC15.14■□□□□ 0.01
MSI1O43347 AL391119.1-201ENST00000416563 271 ntTSL 5 BASIC15.14■□□□□ 0.01
MSI1O43347 ACTG1P11-201ENST00000425411 1125 ntBASIC15.14■□□□□ 0.01
MSI1O43347 GAS5-209ENST00000430245 723 ntTSL 3 BASIC15.14■□□□□ 0.01
MSI1O43347 AC078875.1-201ENST00000431907 724 ntBASIC15.14■□□□□ 0.01
MSI1O43347 AC016825.1-201ENST00000433600 778 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
MSI1O43347 SPTLC1P5-201ENST00000450718 252 ntBASIC15.14■□□□□ 0.01
MSI1O43347 AC125604.1-201ENST00000496255 707 ntBASIC15.14■□□□□ 0.01
MSI1O43347 CYB561A3-219ENST00000544118 1136 ntTSL 5 BASIC15.14■□□□□ 0.01
MSI1O43347 C12orf49-204ENST00000548356 923 ntTSL 2 BASIC15.14■□□□□ 0.01
MSI1O43347 AL132639.2-202ENST00000553520 467 ntTSL 2 BASIC15.14■□□□□ 0.01
MSI1O43347 GNG2-209ENST00000555472 908 ntAPPRIS P1 TSL 3 BASIC15.14■□□□□ 0.01
MSI1O43347 CDIP1-202ENST00000562334 1205 ntTSL 2 BASIC15.14■□□□□ 0.01
MSI1O43347 JMJD8-203ENST00000562824 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
MSI1O43347 STRADA-221ENST00000582137 1238 ntTSL 2 BASIC15.14■□□□□ 0.01
MSI1O43347 AC008133.1-201ENST00000584688 557 ntTSL 4 BASIC15.14■□□□□ 0.01
MSI1O43347 ELOA3C-201ENST00000620688 1218 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
MSI1O43347 ARL16-215ENST00000622299 1053 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
MSI1O43347 AC092299.1-201ENST00000632679 757 ntBASIC15.14■□□□□ 0.01
MSI1O43347 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC15.14■□□□□ 0.01
MSI1O43347 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
MSI1O43347 PCCB-215ENST00000482086 1436 ntTSL 3 BASIC15.14■□□□□ 0.01
MSI1O43347 MYL6-219ENST00000551589 1438 ntAPPRIS ALT1 TSL 2 BASIC15.14■□□□□ 0.01
MSI1O43347 CACNA2D1-201ENST00000356253 3858 ntTSL 5 BASIC15.14■□□□□ 0.01
MSI1O43347 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
MSI1O43347 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
MSI1O43347 SLC29A4-203ENST00000406453 2734 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
MSI1O43347 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
MSI1O43347 SLC51A-201ENST00000296327 1463 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
MSI1O43347 AC109466.1-209ENST00000486913 1618 ntTSL 2 BASIC15.14■□□□□ 0.01
MSI1O43347 SLCO6A1-207ENST00000513675 1611 ntTSL 2 BASIC15.14■□□□□ 0.01
MSI1O43347 FBXL7-203ENST00000510662 1758 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
MSI1O43347 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC15.13■□□□□ 0.01
MSI1O43347 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
MSI1O43347 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
MSI1O43347 AC090515.2-201ENST00000500929 1396 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
MSI1O43347 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
MSI1O43347 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
MSI1O43347 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC15.13■□□□□ 0.01
MSI1O43347 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC15.13■□□□□ 0.01
MSI1O43347 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
MSI1O43347 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
MSI1O43347 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 55.1 ms