Protein–RNA interactions for Protein: O14727

APAF1, Apoptotic protease-activating factor 1, humanhuman

Predictions only

Length 1,248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APAF1O14727 MIR6869-201ENST00000619434 62 ntBASIC19.15■□□□□ 0.66
APAF1O14727 AC133540.1-201ENST00000620845 1019 ntBASIC19.15■□□□□ 0.66
APAF1O14727 SUOX-202ENST00000356124 2306 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
APAF1O14727 COL9A2-202ENST00000372748 2862 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
APAF1O14727 SHCBP1-201ENST00000303383 3461 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
APAF1O14727 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
APAF1O14727 ZNF34-201ENST00000343459 1901 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
APAF1O14727 ZNF34-202ENST00000429371 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
APAF1O14727 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC19.15■□□□□ 0.66
APAF1O14727 WNT2B-202ENST00000369684 3818 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
APAF1O14727 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC19.15■□□□□ 0.66
APAF1O14727 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
APAF1O14727 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
APAF1O14727 EHF-212ENST00000533754 1501 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
APAF1O14727 GNAI2-201ENST00000266027 2169 ntTSL 2 BASIC19.15■□□□□ 0.66
APAF1O14727 AL021395.1-201ENST00000611791 2232 ntTSL 5 BASIC19.15■□□□□ 0.66
APAF1O14727 PRSS30P-201ENST00000390681 2881 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
APAF1O14727 C2-205ENST00000418949 1658 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
APAF1O14727 KBTBD4-202ENST00000430070 2372 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
APAF1O14727 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.66
APAF1O14727 CBX3-203ENST00000409747 1717 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
APAF1O14727 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
APAF1O14727 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC19.14■□□□□ 0.65
APAF1O14727 AC022007.1-201ENST00000383808 1897 ntTSL 2 BASIC19.14■□□□□ 0.65
APAF1O14727 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
APAF1O14727 PRIMPOL-211ENST00000515774 2007 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
APAF1O14727 COX6A2-201ENST00000287490 440 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
APAF1O14727 ERCC1-203ENST00000340192 949 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
APAF1O14727 COX8C-201ENST00000342144 533 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
APAF1O14727 FGFR1-204ENST00000356207 3824 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
APAF1O14727 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
APAF1O14727 MRPL55-214ENST00000366741 603 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
APAF1O14727 MRPL55-218ENST00000366747 603 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
APAF1O14727 SNRPC-202ENST00000374017 1054 ntTSL 2 BASIC19.14■□□□□ 0.65
APAF1O14727 NPPA-201ENST00000376476 728 ntTSL 3 BASIC19.14■□□□□ 0.65
APAF1O14727 KRTAP2-4-201ENST00000394015 764 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
APAF1O14727 DYNC1I1-203ENST00000413338 958 ntTSL 2 BASIC19.14■□□□□ 0.65
APAF1O14727 PFN1P12-201ENST00000455938 534 ntBASIC19.14■□□□□ 0.65
APAF1O14727 UCHL1-207ENST00000508768 827 ntTSL 3 BASIC19.14■□□□□ 0.65
APAF1O14727 AC097634.3-201ENST00000613067 820 ntTSL 3 BASIC19.14■□□□□ 0.65
APAF1O14727 AP000346.4-201ENST00000614827 381 ntBASIC19.14■□□□□ 0.65
APAF1O14727 RBM8A-206ENST00000632555 751 ntAPPRIS P1 TSL 3 BASIC19.14■□□□□ 0.65
APAF1O14727 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC19.14■□□□□ 0.65
APAF1O14727 GPR37-201ENST00000303921 3021 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
APAF1O14727 ZNF174-201ENST00000268655 2260 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
APAF1O14727 ID2-203ENST00000396290 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
APAF1O14727 PSMC3-212ENST00000602866 1373 ntAPPRIS ALT1 TSL 1 (best) BASIC19.14■□□□□ 0.65
APAF1O14727 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
APAF1O14727 LINC00905-203ENST00000588838 1414 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
APAF1O14727 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
APAF1O14727 GNAI2-207ENST00000451956 1486 ntTSL 2 BASIC19.14■□□□□ 0.65
APAF1O14727 ASGR1-201ENST00000269299 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
APAF1O14727 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
APAF1O14727 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
APAF1O14727 NUCB1-201ENST00000405315 2668 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
APAF1O14727 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
APAF1O14727 FSD1L-206ENST00000481272 1804 ntTSL 2 BASIC19.14■□□□□ 0.65
APAF1O14727 GTF3C2-214ENST00000622534 1858 ntTSL 5 BASIC19.14■□□□□ 0.65
APAF1O14727 BEAN1-201ENST00000299694 2160 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
APAF1O14727 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
APAF1O14727 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
APAF1O14727 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC19.13■□□□□ 0.65
APAF1O14727 LTBP3-221ENST00000532932 3327 ntTSL 2 BASIC19.13■□□□□ 0.65
APAF1O14727 MTRF1L-202ENST00000367231 3539 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
APAF1O14727 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC19.13■□□□□ 0.65
APAF1O14727 PLEKHO2-201ENST00000323544 3720 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
APAF1O14727 TPRKB-202ENST00000318190 819 ntTSL 5 BASIC19.13■□□□□ 0.65
APAF1O14727 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
APAF1O14727 DUSP13-202ENST00000372700 781 ntTSL 3 BASIC19.13■□□□□ 0.65
APAF1O14727 OR2R1P-201ENST00000441404 914 ntBASIC19.13■□□□□ 0.65
APAF1O14727 DUSP13-206ENST00000472493 920 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
APAF1O14727 NME2-206ENST00000513177 692 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
APAF1O14727 FAM86B1-218ENST00000534520 808 ntTSL 2 BASIC19.13■□□□□ 0.65
APAF1O14727 MSRB3-206ENST00000535664 964 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
APAF1O14727 AC124068.2-202ENST00000562356 612 ntTSL 3 BASIC19.13■□□□□ 0.65
APAF1O14727 AC124068.2-201ENST00000569473 1109 ntBASIC19.13■□□□□ 0.65
APAF1O14727 RN7SL163P-201ENST00000583100 276 ntBASIC19.13■□□□□ 0.65
APAF1O14727 AL451050.2-201ENST00000606967 682 ntBASIC19.13■□□□□ 0.65
APAF1O14727 AC090164.2-201ENST00000611487 516 ntBASIC19.13■□□□□ 0.65
APAF1O14727 LBHD1-201ENST00000354588 1320 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
APAF1O14727 KLK11-207ENST00000594768 1347 ntAPPRIS P4 TSL 1 (best) BASIC19.13■□□□□ 0.65
APAF1O14727 KAAG1-201ENST00000274766 1382 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
APAF1O14727 PDHB-206ENST00000474765 1503 ntTSL 5 BASIC19.13■□□□□ 0.65
APAF1O14727 FXYD5-201ENST00000342879 1580 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
APAF1O14727 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
APAF1O14727 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC19.13■□□□□ 0.65
APAF1O14727 C12orf73-201ENST00000378090 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
APAF1O14727 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC19.13■□□□□ 0.65
APAF1O14727 HSD17B6-207ENST00000555805 1722 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
APAF1O14727 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
APAF1O14727 FAM86B1-203ENST00000448228 2096 ntAPPRIS P2 TSL 5 BASIC19.13■□□□□ 0.65
APAF1O14727 UMODL1-AS1-201ENST00000329015 2141 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
APAF1O14727 SLC6A12-207ENST00000536824 2101 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
APAF1O14727 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
APAF1O14727 TATDN3-201ENST00000366973 2321 ntAPPRIS ALT1 TSL 1 (best) BASIC19.13■□□□□ 0.65
APAF1O14727 PBX3-201ENST00000342287 2755 ntAPPRIS ALT1 TSL 5 BASIC19.13■□□□□ 0.65
APAF1O14727 C2orf68-201ENST00000306336 2837 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
APAF1O14727 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
APAF1O14727 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
APAF1O14727 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 45.1 ms