Protein–RNA interactions for Protein: E9PAV3

NACA, Nascent polypeptide-associated complex subunit alpha, muscle-specific form, humanhuman

Predictions only

Length 2,078 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NACAE9PAV3 PPP1R3D-201ENST00000370996 3630 ntAPPRIS P1 BASIC10.81□□□□□ -0.68
NACAE9PAV3 MCF2L-204ENST00000375608 3648 ntTSL 5 BASIC10.81□□□□□ -0.68
NACAE9PAV3 IGF2BP2-202ENST00000382199 3688 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
NACAE9PAV3 LGALS2-201ENST00000215886 591 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
NACAE9PAV3 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
NACAE9PAV3 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC10.81□□□□□ -0.68
NACAE9PAV3 AC134915.1-201ENST00000426461 574 ntBASIC10.81□□□□□ -0.68
NACAE9PAV3 KRT223P-202ENST00000449164 1292 ntBASIC10.81□□□□□ -0.68
NACAE9PAV3 FAM86LP-201ENST00000478302 853 ntBASIC10.81□□□□□ -0.68
NACAE9PAV3 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC10.81□□□□□ -0.68
NACAE9PAV3 AC083973.1-206ENST00000518213 815 ntTSL 3 BASIC10.81□□□□□ -0.68
NACAE9PAV3 NEU3-203ENST00000529024 581 ntTSL 3 BASIC10.81□□□□□ -0.68
NACAE9PAV3 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC10.81□□□□□ -0.68
NACAE9PAV3 TBCB-211ENST00000589996 724 ntTSL 3 BASIC10.81□□□□□ -0.68
NACAE9PAV3 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC10.81□□□□□ -0.68
NACAE9PAV3 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC10.81□□□□□ -0.68
NACAE9PAV3 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC10.81□□□□□ -0.68
NACAE9PAV3 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC10.81□□□□□ -0.68
NACAE9PAV3 SSTR3-201ENST00000610913 4100 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
NACAE9PAV3 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
NACAE9PAV3 BCAP29-201ENST00000005259 4572 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
NACAE9PAV3 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
NACAE9PAV3 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC10.81□□□□□ -0.68
NACAE9PAV3 DLGAP1-205ENST00000400150 5332 ntTSL 5 BASIC10.81□□□□□ -0.68
NACAE9PAV3 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
NACAE9PAV3 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC10.81□□□□□ -0.68
NACAE9PAV3 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
NACAE9PAV3 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
NACAE9PAV3 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
NACAE9PAV3 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
NACAE9PAV3 API5-203ENST00000455725 2257 ntTSL 2 BASIC10.81□□□□□ -0.68
NACAE9PAV3 NAXD-201ENST00000309957 2659 ntAPPRIS P1 TSL 2 BASIC10.81□□□□□ -0.68
NACAE9PAV3 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
NACAE9PAV3 NUTM2E-201ENST00000429984 3292 ntAPPRIS P5 TSL 5 BASIC10.81□□□□□ -0.68
NACAE9PAV3 CD276-202ENST00000318443 3469 ntAPPRIS P2 TSL 2 BASIC10.81□□□□□ -0.68
NACAE9PAV3 LIX1L-201ENST00000604000 3975 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
NACAE9PAV3 ABCC6-208ENST00000622290 4941 ntTSL 5 BASIC10.81□□□□□ -0.68
NACAE9PAV3 BVES-201ENST00000314641 5567 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
NACAE9PAV3 KLHL9-201ENST00000359039 5710 ntAPPRIS P1 BASIC10.81□□□□□ -0.68
NACAE9PAV3 CNKSR2-203ENST00000425654 5668 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
NACAE9PAV3 JARID2-202ENST00000397311 5595 ntAPPRIS ALT2 TSL 2 BASIC10.81□□□□□ -0.68
NACAE9PAV3 RAB18-208ENST00000611151 4931 ntTSL 5 BASIC10.81□□□□□ -0.68
NACAE9PAV3 MIR34AHG-203ENST00000635687 4211 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
NACAE9PAV3 SMG8-201ENST00000300917 3263 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
NACAE9PAV3 BNIP3-201ENST00000368636 2861 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
NACAE9PAV3 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
NACAE9PAV3 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
NACAE9PAV3 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
NACAE9PAV3 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
NACAE9PAV3 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
NACAE9PAV3 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC10.81□□□□□ -0.68
NACAE9PAV3 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
NACAE9PAV3 ZNF395-201ENST00000344423 4808 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
NACAE9PAV3 ICE1-201ENST00000296564 7927 ntAPPRIS P2 TSL 1 (best) BASIC10.81□□□□□ -0.68
NACAE9PAV3 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
NACAE9PAV3 KRT8P14-201ENST00000414254 1442 ntBASIC10.81□□□□□ -0.68
NACAE9PAV3 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC10.81□□□□□ -0.68
NACAE9PAV3 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
NACAE9PAV3 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
NACAE9PAV3 MPV17-208ENST00000405076 603 ntTSL 5 BASIC10.81□□□□□ -0.68
NACAE9PAV3 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC10.81□□□□□ -0.68
NACAE9PAV3 AC093433.1-201ENST00000458048 571 ntBASIC10.81□□□□□ -0.68
NACAE9PAV3 ORC6-206ENST00000568364 888 ntTSL 5 BASIC10.81□□□□□ -0.68
NACAE9PAV3 AC124283.3-201ENST00000570869 594 ntBASIC10.81□□□□□ -0.68
NACAE9PAV3 IFT20-206ENST00000578122 834 ntTSL 2 BASIC10.81□□□□□ -0.68
NACAE9PAV3 IFT20-208ENST00000578985 831 ntTSL 3 BASIC10.81□□□□□ -0.68
NACAE9PAV3 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC10.81□□□□□ -0.68
NACAE9PAV3 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC10.81□□□□□ -0.68
NACAE9PAV3 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
NACAE9PAV3 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC10.81□□□□□ -0.68
NACAE9PAV3 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC10.81□□□□□ -0.68
NACAE9PAV3 AL033527.5-201ENST00000641382 801 ntBASIC10.81□□□□□ -0.68
NACAE9PAV3 SAFB-201ENST00000292123 3042 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
NACAE9PAV3 POMT1-204ENST00000402686 3038 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
NACAE9PAV3 YTHDF2-201ENST00000373812 2925 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
NACAE9PAV3 CIT-203ENST00000392521 8708 ntAPPRIS ALT1 TSL 1 (best) BASIC10.81□□□□□ -0.68
NACAE9PAV3 HOXA3-201ENST00000317201 2761 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
NACAE9PAV3 MYLK-208ENST00000475616 5745 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
NACAE9PAV3 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
NACAE9PAV3 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
NACAE9PAV3 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC10.81□□□□□ -0.68
NACAE9PAV3 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC10.81□□□□□ -0.68
NACAE9PAV3 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC10.8□□□□□ -0.68
NACAE9PAV3 ARHGAP33-204ENST00000378944 4219 ntAPPRIS ALT2 TSL 2 BASIC10.8□□□□□ -0.68
NACAE9PAV3 PTPRO-201ENST00000281171 5301 ntAPPRIS P3 TSL 1 (best) BASIC10.8□□□□□ -0.68
NACAE9PAV3 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
NACAE9PAV3 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC10.8□□□□□ -0.68
NACAE9PAV3 KATNB1-201ENST00000379661 2664 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
NACAE9PAV3 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
NACAE9PAV3 GRK6-211ENST00000528793 2571 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
NACAE9PAV3 COQ7-209ENST00000569127 2575 ntTSL 2 BASIC10.8□□□□□ -0.68
NACAE9PAV3 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC10.8□□□□□ -0.68
NACAE9PAV3 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC10.8□□□□□ -0.68
NACAE9PAV3 SNAP91-215ENST00000521743 4263 ntAPPRIS P2 TSL 5 BASIC10.8□□□□□ -0.68
NACAE9PAV3 RBL1-201ENST00000344359 3225 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
NACAE9PAV3 C6orf62-202ENST00000378119 4134 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
NACAE9PAV3 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
NACAE9PAV3 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC10.8□□□□□ -0.68
NACAE9PAV3 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
NACAE9PAV3 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Retrieved 100 of 98,524 protein–RNA pairs in 77.7 ms