Protein–RNA interactions for Protein: A0PJX4

SHISA3, Protein shisa-3 homolog, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3A0PJX4 RALGPS2-204ENST00000367635 5834 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
SHISA3A0PJX4 DSN1-201ENST00000373734 1915 ntTSL 2 BASIC12.74□□□□□ -0.37
SHISA3A0PJX4 AC020910.5-201ENST00000623668 1865 ntBASIC12.74□□□□□ -0.37
SHISA3A0PJX4 AC068075.1-201ENST00000519714 1832 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
SHISA3A0PJX4 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC12.74□□□□□ -0.37
SHISA3A0PJX4 MIER1-202ENST00000355977 3595 ntTSL 5 BASIC12.74□□□□□ -0.37
SHISA3A0PJX4 ZFP36-203ENST00000597629 1786 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
SHISA3A0PJX4 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC12.74□□□□□ -0.37
SHISA3A0PJX4 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC12.74□□□□□ -0.37
SHISA3A0PJX4 AKNA-204ENST00000374075 5038 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
SHISA3A0PJX4 ACVR1B-202ENST00000415850 1665 ntTSL 2 BASIC12.74□□□□□ -0.37
SHISA3A0PJX4 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
SHISA3A0PJX4 PCDHB10-201ENST00000239446 3290 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
SHISA3A0PJX4 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC12.74□□□□□ -0.37
SHISA3A0PJX4 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
SHISA3A0PJX4 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
SHISA3A0PJX4 GJB1-203ENST00000374029 1587 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
SHISA3A0PJX4 POM121L14P-201ENST00000406100 1558 ntBASIC12.74□□□□□ -0.37
SHISA3A0PJX4 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC12.74□□□□□ -0.37
SHISA3A0PJX4 APBB1-220ENST00000609331 1574 ntTSL 5 BASIC12.74□□□□□ -0.37
SHISA3A0PJX4 EIF3C-201ENST00000331666 3145 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
SHISA3A0PJX4 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
SHISA3A0PJX4 LIMS4-204ENST00000632897 1460 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
SHISA3A0PJX4 NCSTN-201ENST00000294785 2936 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
SHISA3A0PJX4 C9orf3-202ENST00000297979 2820 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
SHISA3A0PJX4 ADORA2A-AS1-201ENST00000326341 2557 ntTSL 5 BASIC12.74□□□□□ -0.37
SHISA3A0PJX4 PLAT-203ENST00000429089 2599 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
SHISA3A0PJX4 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
SHISA3A0PJX4 RPS15-201ENST00000233609 534 ntTSL 2 BASIC12.74□□□□□ -0.37
SHISA3A0PJX4 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
SHISA3A0PJX4 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
SHISA3A0PJX4 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
SHISA3A0PJX4 APOA1-205ENST00000375329 927 ntTSL 2 BASIC12.74□□□□□ -0.37
SHISA3A0PJX4 TEX30-203ENST00000376022 828 ntTSL 2 BASIC12.74□□□□□ -0.37
SHISA3A0PJX4 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
SHISA3A0PJX4 AC016730.1-201ENST00000420828 832 ntTSL 2 BASIC12.74□□□□□ -0.37
SHISA3A0PJX4 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC12.74□□□□□ -0.37
SHISA3A0PJX4 AC092580.3-201ENST00000430932 139 ntBASIC12.74□□□□□ -0.37
SHISA3A0PJX4 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
SHISA3A0PJX4 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
SHISA3A0PJX4 GIMAP3P-201ENST00000495150 836 ntBASIC12.74□□□□□ -0.37
SHISA3A0PJX4 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC12.74□□□□□ -0.37
SHISA3A0PJX4 DHDH-204ENST00000523250 634 ntTSL 5 BASIC12.74□□□□□ -0.37
SHISA3A0PJX4 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC12.74□□□□□ -0.37
SHISA3A0PJX4 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC12.74□□□□□ -0.37
SHISA3A0PJX4 AC107982.2-201ENST00000577360 463 ntTSL 5 BASIC12.74□□□□□ -0.37
SHISA3A0PJX4 RPS15-205ENST00000586686 562 ntTSL 5 BASIC12.74□□□□□ -0.37
SHISA3A0PJX4 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC12.74□□□□□ -0.37
SHISA3A0PJX4 METTL23-205ENST00000588302 925 ntTSL 5 BASIC12.74□□□□□ -0.37
SHISA3A0PJX4 RPS15-208ENST00000591804 711 ntTSL 5 BASIC12.74□□□□□ -0.37
SHISA3A0PJX4 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
SHISA3A0PJX4 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC12.74□□□□□ -0.37
SHISA3A0PJX4 AC004790.1-201ENST00000612686 536 ntBASIC12.74□□□□□ -0.37
SHISA3A0PJX4 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC12.74□□□□□ -0.37
SHISA3A0PJX4 PHF21B-201ENST00000313237 3671 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
SHISA3A0PJX4 KCNMA1-291ENST00000640834 3664 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
SHISA3A0PJX4 ACIN1-202ENST00000338631 2445 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
SHISA3A0PJX4 OPN4-201ENST00000241891 2308 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
SHISA3A0PJX4 CCDC142-202ENST00000393965 3406 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
SHISA3A0PJX4 LINC00567-201ENST00000569854 3409 ntBASIC12.74□□□□□ -0.37
SHISA3A0PJX4 PAPOLA-201ENST00000216277 4519 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
SHISA3A0PJX4 ZFAND3-201ENST00000287218 3366 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
SHISA3A0PJX4 EPB42-210ENST00000622454 2227 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
SHISA3A0PJX4 SFI1-208ENST00000432498 4162 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
SHISA3A0PJX4 VILL-201ENST00000283713 2970 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
SHISA3A0PJX4 DYNC1I1-201ENST00000324972 2950 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
SHISA3A0PJX4 DMAC1-201ENST00000358227 2755 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
SHISA3A0PJX4 ATG5-202ENST00000360666 2712 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
SHISA3A0PJX4 GIPC3-201ENST00000322315 4335 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
SHISA3A0PJX4 SOAT1-203ENST00000539888 6794 ntTSL 2 BASIC12.73□□□□□ -0.37
SHISA3A0PJX4 TEX13C-201ENST00000632600 5095 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
SHISA3A0PJX4 AC105345.1-202ENST00000382488 3204 ntTSL 2 BASIC12.73□□□□□ -0.37
SHISA3A0PJX4 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
SHISA3A0PJX4 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
SHISA3A0PJX4 MAP7D2-201ENST00000379643 3918 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
SHISA3A0PJX4 TMEM130-201ENST00000339375 3015 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
SHISA3A0PJX4 FADS2-201ENST00000257261 2964 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
SHISA3A0PJX4 CDH16-201ENST00000299752 2954 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
SHISA3A0PJX4 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
SHISA3A0PJX4 PLD1-201ENST00000331659 2906 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
SHISA3A0PJX4 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
SHISA3A0PJX4 CADM1-204ENST00000536727 3520 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
SHISA3A0PJX4 DCUN1D4-202ENST00000381441 4207 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
SHISA3A0PJX4 RAB37-205ENST00000392614 2704 ntAPPRIS ALT2 TSL 2 BASIC12.73□□□□□ -0.37
SHISA3A0PJX4 CHMP7-201ENST00000313219 3367 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
SHISA3A0PJX4 ZNF23-203ENST00000393539 3242 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
SHISA3A0PJX4 DNAJA4-203ENST00000394855 3245 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
SHISA3A0PJX4 CMC4-201ENST00000369479 864 ntAPPRIS P1 TSL 3 BASIC12.73□□□□□ -0.37
SHISA3A0PJX4 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
SHISA3A0PJX4 AL391647.1-201ENST00000395664 511 ntBASIC12.73□□□□□ -0.37
SHISA3A0PJX4 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC12.73□□□□□ -0.37
SHISA3A0PJX4 KLF2P2-201ENST00000416807 1039 ntBASIC12.73□□□□□ -0.37
SHISA3A0PJX4 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC12.73□□□□□ -0.37
SHISA3A0PJX4 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
SHISA3A0PJX4 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC12.73□□□□□ -0.37
SHISA3A0PJX4 AC112482.1-201ENST00000492080 688 ntBASIC12.73□□□□□ -0.37
SHISA3A0PJX4 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC12.73□□□□□ -0.37
SHISA3A0PJX4 LY6E-204ENST00000519546 971 ntTSL 2 BASIC12.73□□□□□ -0.37
SHISA3A0PJX4 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC12.73□□□□□ -0.37
SHISA3A0PJX4 AC027369.6-201ENST00000525520 931 ntBASIC12.73□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms