Protein–RNA interactions for Protein: A0A5B7

TCRBV4S1A1T, T-cell receptor beta variable 29-1 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV4S1A1TA0A5B7 AC012568.1-201ENST00000558463 472 ntTSL 2 BASIC11.83□□□□□ -0.52
TCRBV4S1A1TA0A5B7 TUBB8-202ENST00000562809 820 ntTSL 5 BASIC11.83□□□□□ -0.52
TCRBV4S1A1TA0A5B7 AC007861.2-201ENST00000573819 571 ntTSL 4 BASIC11.83□□□□□ -0.52
TCRBV4S1A1TA0A5B7 AL118558.3-201ENST00000607414 1079 ntBASIC11.83□□□□□ -0.52
TCRBV4S1A1TA0A5B7 MIR6787-201ENST00000616675 61 ntBASIC11.83□□□□□ -0.52
TCRBV4S1A1TA0A5B7 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC11.83□□□□□ -0.52
TCRBV4S1A1TA0A5B7 ICA1-207ENST00000406470 2440 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
TCRBV4S1A1TA0A5B7 FAM120A-202ENST00000375389 3585 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
TCRBV4S1A1TA0A5B7 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC11.83□□□□□ -0.52
TCRBV4S1A1TA0A5B7 KCNT1-209ENST00000490355 3708 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
TCRBV4S1A1TA0A5B7 FANCA-213ENST00000563673 1694 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
TCRBV4S1A1TA0A5B7 CACNA1C-211ENST00000399617 7482 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
TCRBV4S1A1TA0A5B7 VWA5B2-202ENST00000426955 4120 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
TCRBV4S1A1TA0A5B7 ANKRD13B-201ENST00000394859 3214 ntAPPRIS P1 TSL 2 BASIC11.83□□□□□ -0.52
TCRBV4S1A1TA0A5B7 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
TCRBV4S1A1TA0A5B7 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC11.83□□□□□ -0.52
TCRBV4S1A1TA0A5B7 PTGES3-207ENST00000614328 2077 ntTSL 3 BASIC11.83□□□□□ -0.52
TCRBV4S1A1TA0A5B7 MVK-214ENST00000629016 1591 ntTSL 5 BASIC11.83□□□□□ -0.52
TCRBV4S1A1TA0A5B7 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
TCRBV4S1A1TA0A5B7 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC11.83□□□□□ -0.52
TCRBV4S1A1TA0A5B7 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC11.83□□□□□ -0.52
TCRBV4S1A1TA0A5B7 RSPH9-201ENST00000372163 2534 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
TCRBV4S1A1TA0A5B7 ACIN1-201ENST00000262710 4935 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
TCRBV4S1A1TA0A5B7 BEND6-203ENST00000370748 3497 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
TCRBV4S1A1TA0A5B7 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC11.83□□□□□ -0.52
TCRBV4S1A1TA0A5B7 AC092053.3-201ENST00000641308 4975 ntBASIC11.82□□□□□ -0.52
TCRBV4S1A1TA0A5B7 OPN4-202ENST00000372071 2401 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
TCRBV4S1A1TA0A5B7 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC11.82□□□□□ -0.52
TCRBV4S1A1TA0A5B7 PEX5L-215ENST00000485199 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
TCRBV4S1A1TA0A5B7 TDRD12-202ENST00000444215 3934 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
TCRBV4S1A1TA0A5B7 PPIL2-202ENST00000398831 2574 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
TCRBV4S1A1TA0A5B7 WASHC2A-203ENST00000351071 4642 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
TCRBV4S1A1TA0A5B7 DACH1-204ENST00000620444 4627 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
TCRBV4S1A1TA0A5B7 FOXL1-201ENST00000320241 3655 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
TCRBV4S1A1TA0A5B7 ATP13A2-202ENST00000341676 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
TCRBV4S1A1TA0A5B7 DDX20-201ENST00000369702 4212 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
TCRBV4S1A1TA0A5B7 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC11.82□□□□□ -0.52
TCRBV4S1A1TA0A5B7 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
TCRBV4S1A1TA0A5B7 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC11.82□□□□□ -0.52
TCRBV4S1A1TA0A5B7 ARHGAP23P1-201ENST00000562773 1937 ntBASIC11.82□□□□□ -0.52
TCRBV4S1A1TA0A5B7 NRP2-201ENST00000272849 5909 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
TCRBV4S1A1TA0A5B7 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
TCRBV4S1A1TA0A5B7 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
TCRBV4S1A1TA0A5B7 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC11.82□□□□□ -0.52
TCRBV4S1A1TA0A5B7 AL133338.1-201ENST00000565695 1517 ntBASIC11.82□□□□□ -0.52
TCRBV4S1A1TA0A5B7 SIGLECL1-208ENST00000614422 1516 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
TCRBV4S1A1TA0A5B7 NOS2P2-202ENST00000639528 1659 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
TCRBV4S1A1TA0A5B7 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC11.82□□□□□ -0.52
TCRBV4S1A1TA0A5B7 PTPRO-201ENST00000281171 5301 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
TCRBV4S1A1TA0A5B7 NUCB1-201ENST00000405315 2668 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
TCRBV4S1A1TA0A5B7 MX1-218ENST00000619682 1980 ntTSL 5 BASIC11.82□□□□□ -0.52
TCRBV4S1A1TA0A5B7 EIF3G-201ENST00000253108 1103 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
TCRBV4S1A1TA0A5B7 TEX29-201ENST00000283547 709 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
TCRBV4S1A1TA0A5B7 COX6A2-201ENST00000287490 440 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
TCRBV4S1A1TA0A5B7 TMEM141-201ENST00000290079 768 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
TCRBV4S1A1TA0A5B7 TSHR-202ENST00000342443 1281 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
TCRBV4S1A1TA0A5B7 RAB4B-201ENST00000357052 1133 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
TCRBV4S1A1TA0A5B7 ANAPC11-202ENST00000357385 881 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
TCRBV4S1A1TA0A5B7 BAK1-201ENST00000360661 2132 ntTSL 5 BASIC11.82□□□□□ -0.52
TCRBV4S1A1TA0A5B7 DUSP23-202ENST00000368108 694 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
TCRBV4S1A1TA0A5B7 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC11.82□□□□□ -0.52
TCRBV4S1A1TA0A5B7 AL157392.1-201ENST00000412388 373 ntTSL 2 BASIC11.82□□□□□ -0.52
TCRBV4S1A1TA0A5B7 ZNF564-202ENST00000416136 255 ntTSL 3 BASIC11.82□□□□□ -0.52
TCRBV4S1A1TA0A5B7 MTX1P1-201ENST00000440904 838 ntBASIC11.82□□□□□ -0.52
TCRBV4S1A1TA0A5B7 AC245100.3-201ENST00000441281 285 ntBASIC11.82□□□□□ -0.52
TCRBV4S1A1TA0A5B7 AC099548.2-209ENST00000480264 625 ntBASIC11.82□□□□□ -0.52
TCRBV4S1A1TA0A5B7 AC011365.2-201ENST00000520041 810 ntTSL 5 BASIC11.82□□□□□ -0.52
TCRBV4S1A1TA0A5B7 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC11.82□□□□□ -0.52
TCRBV4S1A1TA0A5B7 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
TCRBV4S1A1TA0A5B7 IGHV3OR16-9-202ENST00000558425 288 ntAPPRIS ALT2 BASIC11.82□□□□□ -0.52
TCRBV4S1A1TA0A5B7 AL031600.1-201ENST00000563610 570 ntTSL 4 BASIC11.82□□□□□ -0.52
TCRBV4S1A1TA0A5B7 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC11.82□□□□□ -0.52
TCRBV4S1A1TA0A5B7 NAT9-222ENST00000583476 583 ntTSL 3 BASIC11.82□□□□□ -0.52
TCRBV4S1A1TA0A5B7 AL022328.3-201ENST00000607943 679 ntBASIC11.82□□□□□ -0.52
TCRBV4S1A1TA0A5B7 LINC00623-205ENST00000621058 767 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
TCRBV4S1A1TA0A5B7 FP565260.5-201ENST00000623188 479 ntTSL 3 BASIC11.82□□□□□ -0.52
TCRBV4S1A1TA0A5B7 ABBA01031663.1-201ENST00000635630 790 ntBASIC11.82□□□□□ -0.52
TCRBV4S1A1TA0A5B7 AC099795.1-202ENST00000640492 759 ntTSL 5 BASIC11.82□□□□□ -0.52
TCRBV4S1A1TA0A5B7 ZDHHC3-201ENST00000296127 3101 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
TCRBV4S1A1TA0A5B7 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC11.82□□□□□ -0.52
TCRBV4S1A1TA0A5B7 KLK5-202ENST00000391809 1405 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
TCRBV4S1A1TA0A5B7 COL1A2-201ENST00000297268 5411 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
TCRBV4S1A1TA0A5B7 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC11.82□□□□□ -0.52
TCRBV4S1A1TA0A5B7 MYO16-203ENST00000357550 6779 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
TCRBV4S1A1TA0A5B7 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
TCRBV4S1A1TA0A5B7 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
TCRBV4S1A1TA0A5B7 CNN2-201ENST00000263097 2179 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
TCRBV4S1A1TA0A5B7 CNN2-205ENST00000562958 2194 ntTSL 2 BASIC11.82□□□□□ -0.52
TCRBV4S1A1TA0A5B7 GPN1-201ENST00000264718 2496 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
TCRBV4S1A1TA0A5B7 PODN-207ENST00000618387 3065 ntAPPRIS ALT2 TSL 2 BASIC11.82□□□□□ -0.52
TCRBV4S1A1TA0A5B7 TP53I11-201ENST00000308212 3683 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
TCRBV4S1A1TA0A5B7 TEX264-205ENST00000416589 1313 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
TCRBV4S1A1TA0A5B7 RGMB-201ENST00000308234 4580 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
TCRBV4S1A1TA0A5B7 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC11.82□□□□□ -0.52
TCRBV4S1A1TA0A5B7 CAMK2D-204ENST00000394522 2696 ntAPPRIS ALT1 TSL 1 (best) BASIC11.82□□□□□ -0.52
TCRBV4S1A1TA0A5B7 KIRREL1-204ENST00000368173 7519 ntTSL 2 BASIC11.81□□□□□ -0.52
TCRBV4S1A1TA0A5B7 ELAVL2-201ENST00000223951 3763 ntAPPRIS ALT1 TSL 1 (best) BASIC11.81□□□□□ -0.52
TCRBV4S1A1TA0A5B7 COL6A2-201ENST00000300527 3461 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
TCRBV4S1A1TA0A5B7 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
TCRBV4S1A1TA0A5B7 AC023090.2-201ENST00000625182 2110 ntBASIC11.81□□□□□ -0.52
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms