Protein–RNA interactions for Protein: Q9Y587

AP4S1, AP-4 complex subunit sigma-1, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4S1Q9Y587 LYN-204ENST00000520220 5808 ntAPPRIS ALT1 TSL 1 (best) BASIC13.87□□□□□ -0.19
AP4S1Q9Y587 NUB1-201ENST00000413040 3180 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
AP4S1Q9Y587 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
AP4S1Q9Y587 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
AP4S1Q9Y587 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
AP4S1Q9Y587 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
AP4S1Q9Y587 KRT18P32-201ENST00000424695 1287 ntBASIC13.87□□□□□ -0.19
AP4S1Q9Y587 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
AP4S1Q9Y587 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
AP4S1Q9Y587 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC13.87□□□□□ -0.19
AP4S1Q9Y587 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC13.87□□□□□ -0.19
AP4S1Q9Y587 PP7080-204ENST00000510714 601 ntTSL 3 BASIC13.87□□□□□ -0.19
AP4S1Q9Y587 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC13.87□□□□□ -0.19
AP4S1Q9Y587 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
AP4S1Q9Y587 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC13.87□□□□□ -0.19
AP4S1Q9Y587 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC13.87□□□□□ -0.19
AP4S1Q9Y587 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
AP4S1Q9Y587 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
AP4S1Q9Y587 AC004461.2-201ENST00000629517 803 ntBASIC13.87□□□□□ -0.19
AP4S1Q9Y587 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC13.87□□□□□ -0.19
AP4S1Q9Y587 RUBCNL-201ENST00000378781 3322 ntAPPRIS ALT2 TSL 2 BASIC13.87□□□□□ -0.19
AP4S1Q9Y587 FES-201ENST00000328850 2829 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
AP4S1Q9Y587 SAMD4A-202ENST00000392067 6833 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
AP4S1Q9Y587 EPRS-201ENST00000366923 5014 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
AP4S1Q9Y587 PLEKHG2-206ENST00000458508 3898 ntAPPRIS ALT2 TSL 2 BASIC13.87□□□□□ -0.19
AP4S1Q9Y587 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC13.87□□□□□ -0.19
AP4S1Q9Y587 TBX6-202ENST00000395224 1803 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
AP4S1Q9Y587 TOR1AIP1-201ENST00000271583 3044 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
AP4S1Q9Y587 C3orf18-206ENST00000449241 2365 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
AP4S1Q9Y587 BHLHE40-AS1-204ENST00000620618 2355 ntTSL 2 BASIC13.87□□□□□ -0.19
AP4S1Q9Y587 GPSM2-202ENST00000406462 7433 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
AP4S1Q9Y587 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC13.87□□□□□ -0.19
AP4S1Q9Y587 ZNF683-205ENST00000436292 1712 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
AP4S1Q9Y587 HIF3A-206ENST00000472815 1709 ntTSL 2 BASIC13.87□□□□□ -0.19
AP4S1Q9Y587 MYO16-203ENST00000357550 6779 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
AP4S1Q9Y587 EIF4G1-219ENST00000435046 4668 ntTSL 5 BASIC13.87□□□□□ -0.19
AP4S1Q9Y587 GALC-201ENST00000261304 3883 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
AP4S1Q9Y587 CTBP1-AS-201ENST00000625256 3886 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
AP4S1Q9Y587 SLC25A26-202ENST00000354883 2673 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
AP4S1Q9Y587 INTS11-248ENST00000545578 2263 ntTSL 2 BASIC13.87□□□□□ -0.19
AP4S1Q9Y587 B4GALT3-202ENST00000367998 1871 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
AP4S1Q9Y587 SGCE-202ENST00000415788 1871 ntTSL 2 BASIC13.87□□□□□ -0.19
AP4S1Q9Y587 CNN2-202ENST00000348419 2033 ntTSL 2 BASIC13.86□□□□□ -0.19
AP4S1Q9Y587 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
AP4S1Q9Y587 RAP2B-201ENST00000323534 8351 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
AP4S1Q9Y587 COL18A1-AS1-201ENST00000397787 3425 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
AP4S1Q9Y587 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC13.86□□□□□ -0.19
AP4S1Q9Y587 USP19-207ENST00000434032 4677 ntAPPRIS ALT2 TSL 2 BASIC13.86□□□□□ -0.19
AP4S1Q9Y587 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC13.86□□□□□ -0.19
AP4S1Q9Y587 MIR193BHG-211ENST00000641433 5365 ntBASIC13.86□□□□□ -0.19
AP4S1Q9Y587 WASHC2A-209ENST00000611324 4417 ntAPPRIS ALT2 TSL 2 BASIC13.86□□□□□ -0.19
AP4S1Q9Y587 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
AP4S1Q9Y587 AC092143.1-201ENST00000556922 2776 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
AP4S1Q9Y587 TRIB1-201ENST00000311922 3635 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
AP4S1Q9Y587 POPDC2-201ENST00000264231 1679 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
AP4S1Q9Y587 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC13.86□□□□□ -0.19
AP4S1Q9Y587 OSBP2-219ENST00000535268 3248 ntTSL 2 BASIC13.86□□□□□ -0.19
AP4S1Q9Y587 HSPA1L-201ENST00000375654 2544 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
AP4S1Q9Y587 SYK-203ENST00000375751 4936 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
AP4S1Q9Y587 CHRFAM7A-201ENST00000299847 6220 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
AP4S1Q9Y587 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
AP4S1Q9Y587 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
AP4S1Q9Y587 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
AP4S1Q9Y587 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
AP4S1Q9Y587 PKIG-203ENST00000372887 769 ntTSL 3 BASIC13.86□□□□□ -0.19
AP4S1Q9Y587 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
AP4S1Q9Y587 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
AP4S1Q9Y587 TLE1P1-201ENST00000422965 589 ntBASIC13.86□□□□□ -0.19
AP4S1Q9Y587 AC007969.1-201ENST00000433675 447 ntBASIC13.86□□□□□ -0.19
AP4S1Q9Y587 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC13.86□□□□□ -0.19
AP4S1Q9Y587 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC13.86□□□□□ -0.19
AP4S1Q9Y587 DUX4L47-201ENST00000566374 394 ntBASIC13.86□□□□□ -0.19
AP4S1Q9Y587 NSD2-204ENST00000382891 7534 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
AP4S1Q9Y587 SLC7A7-201ENST00000285850 2263 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
AP4S1Q9Y587 NRXN1-207ENST00000404971 7578 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
AP4S1Q9Y587 PLA2G4F-202ENST00000397272 5587 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
AP4S1Q9Y587 NEU3-201ENST00000294064 6728 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
AP4S1Q9Y587 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
AP4S1Q9Y587 LINC00882-204ENST00000484698 2718 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
AP4S1Q9Y587 TGFBR3-201ENST00000212355 6465 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
AP4S1Q9Y587 OR2C3-204ENST00000641802 8509 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
AP4S1Q9Y587 JMJD6-208ENST00000617192 5517 ntTSL 5 BASIC13.86□□□□□ -0.19
AP4S1Q9Y587 SYNGR1-203ENST00000328933 4391 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
AP4S1Q9Y587 NGEF-201ENST00000264051 3215 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
AP4S1Q9Y587 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
AP4S1Q9Y587 TMEM173-201ENST00000330794 1771 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
AP4S1Q9Y587 DLGAP1-205ENST00000400150 5332 ntTSL 5 BASIC13.86□□□□□ -0.19
AP4S1Q9Y587 GNG12-AS1-201ENST00000413628 2058 ntTSL 2 BASIC13.86□□□□□ -0.19
AP4S1Q9Y587 TOMM40L-209ENST00000545897 2807 ntTSL 2 BASIC13.86□□□□□ -0.19
AP4S1Q9Y587 SYNGAP1-208ENST00000629380 9862 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
AP4S1Q9Y587 RRM2B-211ENST00000621845 3483 ntTSL 2 BASIC13.85□□□□□ -0.19
AP4S1Q9Y587 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
AP4S1Q9Y587 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
AP4S1Q9Y587 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
AP4S1Q9Y587 PEAR1-201ENST00000292357 4866 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
AP4S1Q9Y587 ZNF259P1-201ENST00000407656 1365 ntBASIC13.85□□□□□ -0.19
AP4S1Q9Y587 AC239798.2-201ENST00000415338 3540 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
AP4S1Q9Y587 ALPK3-201ENST00000258888 10917 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
AP4S1Q9Y587 GGT1-203ENST00000400382 2628 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
AP4S1Q9Y587 CC2D1A-201ENST00000318003 3581 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 46.7 ms