Protein–RNA interactions for Protein: Q9Y3C4

TPRKB, EKC/KEOPS complex subunit TPRKB, humanhuman

Predictions only

Length 175 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPRKBQ9Y3C4 COL18A1-AS1-201ENST00000397787 3425 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
TPRKBQ9Y3C4 FAM219A-207ENST00000379089 3624 ntAPPRIS ALT1 TSL 3 BASIC13.39□□□□□ -0.27
TPRKBQ9Y3C4 EIF4G1-207ENST00000411531 4683 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
TPRKBQ9Y3C4 TROVE2-208ENST00000432079 7848 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
TPRKBQ9Y3C4 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
TPRKBQ9Y3C4 TMEM100-201ENST00000424486 1747 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
TPRKBQ9Y3C4 AL023775.1-201ENST00000454907 1746 ntBASIC13.39□□□□□ -0.27
TPRKBQ9Y3C4 CACNA1C-214ENST00000399634 7590 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
TPRKBQ9Y3C4 CACNA1C-222ENST00000406454 7590 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
TPRKBQ9Y3C4 TMEM248-201ENST00000341567 4229 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
TPRKBQ9Y3C4 TSPAN31-201ENST00000257910 1849 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
TPRKBQ9Y3C4 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC13.39□□□□□ -0.27
TPRKBQ9Y3C4 KIF12-201ENST00000374118 2001 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
TPRKBQ9Y3C4 EOGT-202ENST00000383701 4731 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
TPRKBQ9Y3C4 AAR2-201ENST00000320849 2430 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
TPRKBQ9Y3C4 CLCN4-201ENST00000380829 2418 ntTSL 5 BASIC13.39□□□□□ -0.27
TPRKBQ9Y3C4 LINC00865-202ENST00000448963 4272 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
TPRKBQ9Y3C4 ALOX15B-202ENST00000380183 2739 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
TPRKBQ9Y3C4 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
TPRKBQ9Y3C4 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC13.39□□□□□ -0.27
TPRKBQ9Y3C4 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
TPRKBQ9Y3C4 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
TPRKBQ9Y3C4 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC13.39□□□□□ -0.27
TPRKBQ9Y3C4 TLE1P1-201ENST00000422965 589 ntBASIC13.39□□□□□ -0.27
TPRKBQ9Y3C4 AC007969.1-201ENST00000433675 447 ntBASIC13.39□□□□□ -0.27
TPRKBQ9Y3C4 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC13.39□□□□□ -0.27
TPRKBQ9Y3C4 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC13.39□□□□□ -0.27
TPRKBQ9Y3C4 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC13.39□□□□□ -0.27
TPRKBQ9Y3C4 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC13.39□□□□□ -0.27
TPRKBQ9Y3C4 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC13.39□□□□□ -0.27
TPRKBQ9Y3C4 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC13.39□□□□□ -0.27
TPRKBQ9Y3C4 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
TPRKBQ9Y3C4 PSME4-202ENST00000404125 7099 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
TPRKBQ9Y3C4 PORCN-204ENST00000361988 1672 ntAPPRIS ALT1 TSL 5 BASIC13.39□□□□□ -0.27
TPRKBQ9Y3C4 AP000437.1-201ENST00000624057 2085 ntBASIC13.39□□□□□ -0.27
TPRKBQ9Y3C4 NPNT-211ENST00000506666 2187 ntTSL 2 BASIC13.39□□□□□ -0.27
TPRKBQ9Y3C4 CD300LB-202ENST00000392621 2286 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
TPRKBQ9Y3C4 PRR26-202ENST00000441152 2251 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
TPRKBQ9Y3C4 BHLHE40-AS1-204ENST00000620618 2355 ntTSL 2 BASIC13.39□□□□□ -0.27
TPRKBQ9Y3C4 NEK4-202ENST00000383721 2576 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
TPRKBQ9Y3C4 PSAP-202ENST00000394936 2872 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
TPRKBQ9Y3C4 COL2A1-201ENST00000337299 4257 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
TPRKBQ9Y3C4 NLRP13-201ENST00000342929 3132 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
TPRKBQ9Y3C4 AL021395.1-201ENST00000611791 2232 ntTSL 5 BASIC13.39□□□□□ -0.27
TPRKBQ9Y3C4 SGK2-203ENST00000373092 1906 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
TPRKBQ9Y3C4 HMGA1-203ENST00000374116 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC13.39□□□□□ -0.27
TPRKBQ9Y3C4 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC13.39□□□□□ -0.27
TPRKBQ9Y3C4 NFATC2-202ENST00000396009 7437 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
TPRKBQ9Y3C4 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
TPRKBQ9Y3C4 GTF2IRD2-201ENST00000451013 3558 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
TPRKBQ9Y3C4 AL805961.2-201ENST00000642139 4817 ntBASIC13.38□□□□□ -0.27
TPRKBQ9Y3C4 PDE2A-203ENST00000418754 2855 ntTSL 2 BASIC13.38□□□□□ -0.27
TPRKBQ9Y3C4 RNF26-201ENST00000311413 2787 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
TPRKBQ9Y3C4 STK3-218ENST00000617590 2485 ntTSL 5 BASIC13.38□□□□□ -0.27
TPRKBQ9Y3C4 CAPN14-202ENST00000403897 2197 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
TPRKBQ9Y3C4 SH3PXD2B-201ENST00000311601 7777 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
TPRKBQ9Y3C4 UNC5CL-201ENST00000244565 3136 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
TPRKBQ9Y3C4 ZIK1-204ENST00000597850 4181 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
TPRKBQ9Y3C4 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
TPRKBQ9Y3C4 MTG2-201ENST00000370823 2929 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
TPRKBQ9Y3C4 COL1A1-201ENST00000225964 6727 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
TPRKBQ9Y3C4 UQCRB-201ENST00000287022 5575 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
TPRKBQ9Y3C4 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
TPRKBQ9Y3C4 CYP26B1-205ENST00000546307 4331 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
TPRKBQ9Y3C4 OFD1-202ENST00000380550 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
TPRKBQ9Y3C4 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
TPRKBQ9Y3C4 ZNF333-209ENST00000601134 1392 ntTSL 5 BASIC13.38□□□□□ -0.27
TPRKBQ9Y3C4 NUB1-201ENST00000413040 3180 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
TPRKBQ9Y3C4 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
TPRKBQ9Y3C4 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
TPRKBQ9Y3C4 MLPH-201ENST00000264605 3823 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
TPRKBQ9Y3C4 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
TPRKBQ9Y3C4 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC13.38□□□□□ -0.27
TPRKBQ9Y3C4 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
TPRKBQ9Y3C4 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
TPRKBQ9Y3C4 CD81-202ENST00000381036 880 ntTSL 3 BASIC13.38□□□□□ -0.27
TPRKBQ9Y3C4 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
TPRKBQ9Y3C4 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
TPRKBQ9Y3C4 GAPDHP40-201ENST00000505218 1006 ntBASIC13.38□□□□□ -0.27
TPRKBQ9Y3C4 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC13.38□□□□□ -0.27
TPRKBQ9Y3C4 RNA5SP419-201ENST00000515908 135 ntBASIC13.38□□□□□ -0.27
TPRKBQ9Y3C4 RNA5SP416-201ENST00000516838 111 ntBASIC13.38□□□□□ -0.27
TPRKBQ9Y3C4 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC13.38□□□□□ -0.27
TPRKBQ9Y3C4 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC13.38□□□□□ -0.27
TPRKBQ9Y3C4 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC13.38□□□□□ -0.27
TPRKBQ9Y3C4 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC13.38□□□□□ -0.27
TPRKBQ9Y3C4 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC13.38□□□□□ -0.27
TPRKBQ9Y3C4 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
TPRKBQ9Y3C4 CITED2-204ENST00000618718 901 ntTSL 2 BASIC13.38□□□□□ -0.27
TPRKBQ9Y3C4 LINC00887-202ENST00000414120 2880 ntTSL 3 BASIC13.38□□□□□ -0.27
TPRKBQ9Y3C4 COL16A1-202ENST00000373668 3643 ntTSL 2 BASIC13.38□□□□□ -0.27
TPRKBQ9Y3C4 ADAMTSL4-201ENST00000271643 4250 ntAPPRIS P3 TSL 5 BASIC13.38□□□□□ -0.27
TPRKBQ9Y3C4 NTRK3-AS1-201ENST00000569588 2663 ntTSL 2 BASIC13.38□□□□□ -0.27
TPRKBQ9Y3C4 RIPK4-201ENST00000332512 3889 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
TPRKBQ9Y3C4 THSD4-201ENST00000261862 3133 ntTSL 5 BASIC13.38□□□□□ -0.27
TPRKBQ9Y3C4 RTFDC1-201ENST00000023939 1745 ntTSL 2 BASIC13.38□□□□□ -0.27
TPRKBQ9Y3C4 TP53INP1-202ENST00000448464 5631 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
TPRKBQ9Y3C4 RAB6B-201ENST00000285208 5526 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
TPRKBQ9Y3C4 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
TPRKBQ9Y3C4 USO1-201ENST00000264904 4135 ntTSL 2 BASIC13.38□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 37 ms