Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 KLK1-201ENST00000301420 866 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CUEDC1Q9NWM3 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CUEDC1Q9NWM3 TCEAL1-203ENST00000372626 721 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
CUEDC1Q9NWM3 ARMCX1-201ENST00000372829 2141 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CUEDC1Q9NWM3 DMKN-204ENST00000408915 600 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
CUEDC1Q9NWM3 AP000350.4-201ENST00000433835 788 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
CUEDC1Q9NWM3 DRGX-202ENST00000434016 955 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
CUEDC1Q9NWM3 TNFRSF14-AS1-206ENST00000452793 569 ntTSL 3 BASIC14.22□□□□□ -0.13
CUEDC1Q9NWM3 IGHJ2P-201ENST00000454480 60 ntBASIC14.22□□□□□ -0.13
CUEDC1Q9NWM3 RPL13AP20-201ENST00000459725 609 ntBASIC14.22□□□□□ -0.13
CUEDC1Q9NWM3 LILRA5-204ENST00000486742 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
CUEDC1Q9NWM3 KLF3-AS1-204ENST00000505240 567 ntTSL 4 BASIC14.22□□□□□ -0.13
CUEDC1Q9NWM3 CDKN2AIP-205ENST00000510928 860 ntTSL 2 BASIC14.22□□□□□ -0.13
CUEDC1Q9NWM3 ZNF767P-206ENST00000513792 565 ntBASIC14.22□□□□□ -0.13
CUEDC1Q9NWM3 TPO-215ENST00000539820 1157 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CUEDC1Q9NWM3 AC103988.2-201ENST00000561804 725 ntBASIC14.22□□□□□ -0.13
CUEDC1Q9NWM3 TSR1-204ENST00000576112 1290 ntTSL 5 BASIC14.22□□□□□ -0.13
CUEDC1Q9NWM3 CYGB-203ENST00000589145 788 ntTSL 3 BASIC14.22□□□□□ -0.13
CUEDC1Q9NWM3 AL358473.2-201ENST00000610411 556 ntTSL 4 BASIC14.22□□□□□ -0.13
CUEDC1Q9NWM3 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC14.22□□□□□ -0.13
CUEDC1Q9NWM3 UBE2Q2P6-202ENST00000617217 443 ntTSL 5 BASIC14.22□□□□□ -0.13
CUEDC1Q9NWM3 KLF3-AS1-207ENST00000620339 558 ntTSL 4 BASIC14.22□□□□□ -0.13
CUEDC1Q9NWM3 F10-203ENST00000409306 1450 ntTSL 3 BASIC14.22□□□□□ -0.13
CUEDC1Q9NWM3 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CUEDC1Q9NWM3 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CUEDC1Q9NWM3 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CUEDC1Q9NWM3 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
CUEDC1Q9NWM3 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
CUEDC1Q9NWM3 SIGLEC12-203ENST00000598614 1434 ntTSL 5 BASIC14.22□□□□□ -0.13
CUEDC1Q9NWM3 AMT-204ENST00000427987 1646 ntTSL 5 BASIC14.22□□□□□ -0.13
CUEDC1Q9NWM3 C1QTNF9-201ENST00000332018 1830 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CUEDC1Q9NWM3 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC14.22□□□□□ -0.13
CUEDC1Q9NWM3 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CUEDC1Q9NWM3 FANCG-201ENST00000378643 2631 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
CUEDC1Q9NWM3 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
CUEDC1Q9NWM3 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
CUEDC1Q9NWM3 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CUEDC1Q9NWM3 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC14.22□□□□□ -0.13
CUEDC1Q9NWM3 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CUEDC1Q9NWM3 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
CUEDC1Q9NWM3 COL7A1-201ENST00000328333 9276 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CUEDC1Q9NWM3 AL590440.2-201ENST00000641973 1595 ntBASIC14.22□□□□□ -0.13
CUEDC1Q9NWM3 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC14.21□□□□□ -0.13
CUEDC1Q9NWM3 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC14.21□□□□□ -0.13
CUEDC1Q9NWM3 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CUEDC1Q9NWM3 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
CUEDC1Q9NWM3 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC14.21□□□□□ -0.13
CUEDC1Q9NWM3 SHC1P1-201ENST00000425230 1745 ntBASIC14.21□□□□□ -0.13
CUEDC1Q9NWM3 AC245123.1-202ENST00000612422 1719 ntTSL 5 BASIC14.21□□□□□ -0.13
CUEDC1Q9NWM3 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
CUEDC1Q9NWM3 MPI-203ENST00000535694 1523 ntTSL 2 BASIC14.21□□□□□ -0.13
CUEDC1Q9NWM3 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
CUEDC1Q9NWM3 AC139712.1-201ENST00000378256 1875 ntBASIC14.21□□□□□ -0.13
CUEDC1Q9NWM3 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
CUEDC1Q9NWM3 TP53I11-201ENST00000308212 3683 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
CUEDC1Q9NWM3 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CUEDC1Q9NWM3 NEU2-201ENST00000233840 1143 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CUEDC1Q9NWM3 MIR326-201ENST00000362220 95 ntBASIC14.21□□□□□ -0.13
CUEDC1Q9NWM3 AL157373.2-201ENST00000437559 784 ntTSL 3 BASIC14.21□□□□□ -0.13
CUEDC1Q9NWM3 CICP12-201ENST00000455801 843 ntBASIC14.21□□□□□ -0.13
CUEDC1Q9NWM3 TPT1P11-201ENST00000458482 498 ntBASIC14.21□□□□□ -0.13
CUEDC1Q9NWM3 LAMA5-AS1-203ENST00000478167 690 ntTSL 3 BASIC14.21□□□□□ -0.13
CUEDC1Q9NWM3 SNHG9-201ENST00000531523 275 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
CUEDC1Q9NWM3 ORAOV1-211ENST00000542341 775 ntTSL 2 BASIC14.21□□□□□ -0.13
CUEDC1Q9NWM3 NR2C2AP-207ENST00000544883 899 ntTSL 2 BASIC14.21□□□□□ -0.13
CUEDC1Q9NWM3 AC136428.1-201ENST00000569103 349 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
CUEDC1Q9NWM3 AP002360.2-202ENST00000572035 738 ntTSL 3 BASIC14.21□□□□□ -0.13
CUEDC1Q9NWM3 AC011447.3-204ENST00000585498 883 ntTSL 2 BASIC14.21□□□□□ -0.13
CUEDC1Q9NWM3 EEF1DP1-201ENST00000585891 896 ntBASIC14.21□□□□□ -0.13
CUEDC1Q9NWM3 AL118558.3-201ENST00000607414 1079 ntBASIC14.21□□□□□ -0.13
CUEDC1Q9NWM3 NPIPB11-202ENST00000614927 1216 ntTSL 5 BASIC14.21□□□□□ -0.13
CUEDC1Q9NWM3 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC14.21□□□□□ -0.13
CUEDC1Q9NWM3 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CUEDC1Q9NWM3 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
CUEDC1Q9NWM3 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CUEDC1Q9NWM3 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
CUEDC1Q9NWM3 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC14.21□□□□□ -0.13
CUEDC1Q9NWM3 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CUEDC1Q9NWM3 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CUEDC1Q9NWM3 E2F3P2-201ENST00000447755 1422 ntBASIC14.21□□□□□ -0.13
CUEDC1Q9NWM3 CALCR-203ENST00000394441 1774 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
CUEDC1Q9NWM3 AGAP1-201ENST00000304032 10832 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
CUEDC1Q9NWM3 AICDA-201ENST00000229335 2819 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.14
CUEDC1Q9NWM3 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.14
CUEDC1Q9NWM3 NUP98-203ENST00000359171 7023 ntTSL 5 BASIC14.21□□□□□ -0.14
CUEDC1Q9NWM3 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
CUEDC1Q9NWM3 WBP4-201ENST00000379487 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
CUEDC1Q9NWM3 BX640514.1-201ENST00000583223 1918 ntBASIC14.21□□□□□ -0.14
CUEDC1Q9NWM3 AC007191.1-201ENST00000623179 2995 ntBASIC14.21□□□□□ -0.14
CUEDC1Q9NWM3 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
CUEDC1Q9NWM3 OSBPL5-202ENST00000348039 2798 ntTSL 2 BASIC14.21□□□□□ -0.14
CUEDC1Q9NWM3 LINC02076-201ENST00000577684 1871 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
CUEDC1Q9NWM3 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC14.2□□□□□ -0.14
CUEDC1Q9NWM3 SLIT1-201ENST00000266058 7925 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CUEDC1Q9NWM3 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CUEDC1Q9NWM3 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CUEDC1Q9NWM3 ABLIM2-209ENST00000505872 1680 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
CUEDC1Q9NWM3 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
CUEDC1Q9NWM3 ENDOD1-201ENST00000278505 4687 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CUEDC1Q9NWM3 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms